| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF030J01 | Sequence | 485 | 007409 (4) | ref|XP_004234514.1| | 2e-36 | PREDICTED: ubiquitin domain-containing protein DSK2b-like [Solanum lycopersicum | 681 | 008607 (3) | ref|XP_004234514.1| | 2e-62 | PREDICTED: ubiquitin domain-containing protein DSK2b-like [Solanum lycopersicum |
| JMFF038C05 | Sequence | 504 | 007409 (4) | ref|XP_004234514.1| | 2e-33 | PREDICTED: ubiquitin domain-containing protein DSK2b-like [Solanum lycopersicum | 764 | 008607 (3) | ref|XP_004234514.1| | 4e-78 | PREDICTED: ubiquitin domain-containing protein DSK2b-like [Solanum lycopersicum |
| JMFS123E05 | Sequence | 568 | 007409 (4) | ref|XP_004234514.1| | 1e-37 | PREDICTED: ubiquitin domain-containing protein DSK2b-like [Solanum lycopersicum | |||||
| JMSF039I05 | Sequence | 714 | 007409 (4) | ref|XP_004234514.1| | 3e-44 | PREDICTED: ubiquitin domain-containing protein DSK2b-like [Solanum lycopersicum | 783 | 008607 (3) | ref|XP_002521706.1| | 3e-35 | plant ubiquilin, putative [Ricinus communis] gb|EEF40693.1| plant ubiquilin, put |
This contig is upended
. : . : . : . : . : . :
JMSF039I05+ GAAAAAGAGGCAT
____________________________________________________________
consensus GAAAAAGAGGCAT
. : . : . : . : . : . :
JMSF039I05+ GTTCAATATATCTCTCATCATATCAGGATTCTGACTCATGTGCTGCTGAAACCGATCAAA
____________________________________________________________
consensus GTTCAATATATCTCTCATCATATCAGGATTCTGACTCATGTGCTGCTGAAACCGATCAAA
. : . : . : . : . : . :
JMSF039I05+ ATCTGGAAGTCCATCTCCAAATAACCCTGCACCACTTCCAGGTCTGTTCAAATTAAGCCC
____________________________________________________________
consensus ATCTGGAAGTCCATCTCCAAATAACCCTGCACCACTTCCAGGTCTGTTCAAATTAAGCCC
. : . : . : . : . : . :
JMSF039I05+ AGGAAACAATGAAGCTCCAAGACCTGATCCATCAAATGTTCCACCTACATTCACATCTGG
____________________________________________________________
consensus AGGAAACAATGAAGCTCCAAGACCTGATCCATCAAATGTTCCACCTACATTCACATCTGG
. : . : . : . : . : . :
JMFS123E05+ GCATTTTGGTTAGGACTTGGAGCACCAGGATTACCTGCACCTGC
JMSF039I05+ GCCAGTATCCCTCAGTGCATTTTGGTTAGGACTTGGAGCACCAGGATTA-CCTGACCTGC
JMFF038C05+ TGCACCTGC
JMFF030J01+ CCTGC
____________________________________________________________
consensus GCCAGTATCCCTCAGTGCATTTTGGTTAGGACTTGGAGCACCAGGATTACCTGCACCTGC
. : . : . : . : . : . :
JMFS123E05+ AGTATTTGTAGAGGCAGCTGAAGCAAAGCCACGAACCAAATGAATAGTGTGACTGGCCGC
JMSF039I05+ AGTATTTGTAGAGGCAGCTGAAGCAAAGCCACGAACCAAATGAATAGTGTGACTGGCCGC
JMFF038C05+ AGTATTTGTAGAGGCAGCTGAAGCAAAGCCACGAACCAAATGAATAGTGTGACTGGCCGC
JMFF030J01+ AGTATTTGTAGAGGCAGCTGAAGCAAAGCCACGAACCAAATGAATAGTGTGACTGGCCGC
____________________________________________________________
consensus AGTATTTGTAGAGGCAGCTGAAGCAAAGCCACGAACCAAATGAATAGTGTGACTGGCCGC
. : . : . : . : . : . :
JMFS123E05+ CAAACCATAGCTTTCTAAGGTTTGGTCGTCCTTCAGGATCCGGCCTTTGTAGATCAACCG
JMSF039I05+ CAAACCATAGCTTTCTAAGGTTTGGTCGTCCTTCAGGATCCGGCCTTTGTAGATCAACCG
JMFF038C05+ CAAACCATAGCTTTCTAAGGTTTGGTCGTCCTTCAGGATCCGGCCTTTGTAGATCAACCG
JMFF030J01+ CAAACCATAGCTTTCTAAGGTTTGGTCGTCCTTCAGGATCCGGCCTTTGTAGATCAACCG
____________________________________________________________
consensus CAAACCATAGCTTTCTAAGGTTTGGTCGTCCTTCAGGATCCGGCCTTTGTAGATCAACCG
. : . : . : . : . : . :
JMFS123E05+ CTGCTGCTCGGCGGGGATGTCGCACTGCTGAGCTACTAAGGACTTGAAGGCTCCGATGGT
JMSF039I05+ CTGCTGCTCGGCGGGGATGTCGCACTGCTGAGCTACTAAGGACTTGAAGGCTCCGATGGT
JMFF038C05+ CTGCTGCTCGGCGGGGATGTCGCACTGCTGAGCTACTAAGGACTTGAAGGCTCCGATGGT
JMFF030J01+ CTGCTGCTCGGCGGGGATGTCGCACTGCTGAGCTACTAAGGACTTGAAGGCTCCGATGGT
____________________________________________________________
consensus CTGCTGCTCGGCGGGGATGTCGCACTGCTGAGCTACTAAGGACTTGAAGGCTCCGATGGT
. : . : . : . : . : . :
JMFS123E05+ GATGCCGAGATACGCCTCCACCGAGAACTTAGAGCCGTTGGAGGACCGGATAAACACGGC
JMSF039I05+ GATGCCGAGATACGCCTCCACCGAGAACTTAGAGCCGTTGGAGGACCGGATAAACACGGC
JMFF038C05+ GATGCCGAGATACGCCTCCACCGAGAACTTAGAGCCGTTGGAGGACCGGATAAACACGGC
JMFF030J01+ GATGCCGAGATACGCCTCCACCGAGAACTTAGAGCCGTTGGAGGACCGGATAAACACGGC
____________________________________________________________
consensus GATGCCGAGATACGCCTCCACCGAGAACTTAGAGCCGTTGGAGGACCGGATAAACACGGC
. : . : . : . : . : . :
JMFS123E05+ CACTTGATTCCCGCTACAACCGCCTGCCTCGGCGTTGTTTTCGCTGTCCGAATCACCCCC
JMSF039I05+ CACTTGATTCCCGCTACAACCGCCTGCCTCGGCGTTGTTTTCGCTGTCCGAATCACCCCC
JMFF038C05+ CACTTGATTCCCGCTACAACCGCCTGCCTCGGCGTTGTTTTCGCTGTCCGAATCACCCCC
JMFF030J01+ CACTTGATTCCCGCTACAACCGCCTGCCTCGGCGTTGTTTTCGCTGTCCGAATCACCCCC
____________________________________________________________
consensus CACTTGATTCCCGCTACAACCGCCTGCCTCGGCGTTGTTTTCGCTGTCCGAATCACCCCC
. : . : . : . : . : . :
JMFS123E05+ ATCGCGGTTTCCTGCAACGCTAGCATCGCCGCCGCCCATCGTCAAACCCCTCCCCTTGAC
JMSF039I05+ ATCGCGGTTTCCTGCAACGCTAGCATCGCCGCCGCCCATCGTCAAACCCCTCCCCTTGAC
JMFF038C05+ ATCGCGGTTTCCTGCAACGCTAGCATCGCCGCCGCCCATCGTCAAACCCCTCCCCTTGAC
JMFF030J01+ ATCGCGGTTTCCTGCAACGCTAGCATCGCCGCCGCCCATCGTCAAACCCCTCCCCTTGAC
____________________________________________________________
consensus ATCGCGGTTTCCTGCAACGCTAGCATCGCCGCCGCCCATCGTCAAACCCCTCCCCTTGAC
. : . : . : . : . : . :
JMFS123E05+ AATCCGGGAGGCTTTTCAACGATTCCAATCCGAATTTGCGAAAATCGAGAGAGAATACTG
JMSF039I05+ AATCCGGGAGGCTTTTCAACGATTCCAATCCGAATTTGCGAAAATCGAGAGAGAATACTG
JMFF038C05+ AATCCGGGAGGCTTTTCAACGATTCCAATCCGAATTTGCGAAAATCGAGAGAGAATACTG
JMFF030J01+ AATCCGGGAGGCTTTTCAACGATTCCAATCCGAATTTGCGAAAATCGAGAGAGAATACTG
____________________________________________________________
consensus AATCCGGGAGGCTTTTCAACGATTCCAATCCGAATTTGCGAAAATCGAGAGAGAATACTG
. : . : . : . : . : . :
JMFS123E05+ CGAAATTCAGCTGCTGATCAGTGGAGTGAAACACA
JMSF039I05+ CGAAATTCAGCTGCTGATCAGTGGAGTGAAACACA
JMFF038C05+ CGAAATTCAGCTGCTGATCAGTGGAGTGAAACACACTCGATGCCCTAGCCTTCGGAAGAC
JMFF030J01+ CGAAATTCAGCTGCTGATCAGTGGAGTGAAACACACTCGATGCCCTAGCCTTCGGAAGAC
____________________________________________________________
consensus CGAAATTCAGCTGCTGATCAGTGGAGTGAAACACACTCGATGCCCTAGCCTTCGGAAGAC