Contig 007408:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS056A02+                       CGGCGAACTCAATTTCGATATAGCCTCCGCATTGTCCAAGCAAGGAAT
                      ____________________________________________________________
consensus                         CGGCGAACTCAATTTCGATATAGCCTCCGCATTGTCCAAGCAAGGAAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS056A02+           GTAGTCGCTCATGTTCTCATCACAAACTTCAAATTTCTCAAATTTTCCCTTTACAAGCTC
                      ____________________________________________________________
consensus             GTAGTCGCTCATGTTCTCATCACAAACTTCAAATTTCTCAAATTTTCCCTTTACAAGCTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS056A02+           TCTATCCTCGTCTTTATCTGCTCCTCCCTCATTCTCATTCGCCACAGTCTCCACCAGGGC
                      ____________________________________________________________
consensus             TCTATCCTCGTCTTTATCTGCTCCTCCCTCATTCTCATTCGCCACAGTCTCCACCAGGGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS056A02+           ACTTTCGAAATCCCCAACGATAAATTCCCCCGCCATCACGCCATTCTCGTCTATAATTCC
JMFF030H08+                                                                   TTCC
                      ____________________________________________________________
consensus             ACTTTCGAAATCCCCAACGATAAATTCCCCCGCCATCACGCCATTCTCGTCTATAATTCC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS056A02+           CATCCATTCCAAGAAATCCCCCTGCGACCTTGGCCGAGCTGCCGCAGGCGGAGAAACAGG
JMFF030H08+           CATCCATTCCAAGAAATCCCCCTGCGACCTTGGCCGAGCTGCCGCAGGCGGAGAAACAGG
                      ____________________________________________________________
consensus             CATCCATTCCAAGAAATCCCCCTGCGACCTTGGCCGAGCTGCCGCAGGCGGAGAAACAGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS056A02+           CTGCTGAGACTGGGTGGTCACAGTTGTGCCAGTATTGATGGTGACGGTGATGGTGTCAAG
JMFF030H08+           CTGCTGAGACTGGGTGGTCACAGTTGTGCCAGTATTGATGGTGACGGTGATGGTGTCAAG
                      ____________________________________________________________
consensus             CTGCTGAGACTGGGTGGTCACAGTTGTGCCAGTATTGATGGTGACGGTGATGGTGTCAAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS056A02+           GATGGAGAAGGAGGAGGGGAGCACGGTTATGGGGTTGAAAGAGAAATACCTGAGGAGGAA
JMFF030H08+           GATGGAGAAGGAGGAGGGGAGCACGGTTATGGGGTTGAAAGAGAAATACCTGAGGAGGAA
                      ____________________________________________________________
consensus             GATGGAGAAGGAGGAGGGGAGCACGGTTATGGGGTTGAAAGAGAAATACCTGAGGAGGAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS056A02+           GAAGAAGGAGAGGGATATGAGGGATAAAGCAGTGAGTTTTACGAAAGATGGGGACTTTGT
JMFF030H08+           GAAGAAGGAGAGGGATATGAGGGATAAAGCAGTGAGTTTTACGAAAGATGGGGACTTTGT
                      ____________________________________________________________
consensus             GAAGAAGGAGAGGGATATGAGGGATAAAGCAGTGAGTTTTACGAAAGATGGGGACTTTGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS056A02+           AGGTGACAAGTGATCAGAATACGATAAGCTTGTGGCGCGGACCTTCATGTTCAGAGAACT
JMFF030H08+           AGGTGACAAGTGATCAGAATACGATAAGCTTGTGGCGCGGACCTTCATGTTCAGAGAACT
                      ____________________________________________________________
consensus             AGGTGACAAGTGATCAGAATACGATAAGCTTGTGGCGCGGACCTTCATGTTCAGAGAACT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS056A02+           GGGAAGAGAGGCGCCGCGGGCGGCGGTGAAATATCAACTGTGGCTTTGATTCTTGGTCTG
JMFF030H08+           GGGAAGAGAGGCGCCGCGGGCGGCGGTGAAATATCAACTGTGGCTTTGATTCTTGGTCTG
                      ____________________________________________________________
consensus             GGGAAGAGAGGCGCCGCGGGCGGCGGTGAAATATCAACTGTGGCTTTGATTCTTGGTCTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFS056A02+           ACGTGTTTGGTTTTAGAGGAAGTGA                                   
JMFF030H08+           ACGTGTTTGGTTTTAGAGGAAGTGAGGCTGTGCCACATATTTTGTAGGAGAAGAAGGATT
                      ____________________________________________________________
consensus             ACGTGTTTGGTTTTAGAGGAAGTGAGGCTGTGCCACATATTTTGTAGGAGAAGAAGGATT