| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF021A19 | Sequence | 455 | 007398 (9) | ref|XP_006348433.1| | 2e-07 | PREDICTED: micronuclear linker histone polyprotein-like isoform X1 [Solanum tub | 675 | 013833 (13) | ref|XP_006339180.1| | 4e-12 | PREDICTED: micronuclear linker histone polyprotein-like [Solanum tuberosum] |
| JMFF026J23 | Sequence | 533 | 007398 (9) | ref|XP_006348433.1| | 5e-10 | PREDICTED: micronuclear linker histone polyprotein-like isoform X1 [Solanum tub | 741 | 013833 (13) | ref|XP_006339180.1| | 8e-28 | PREDICTED: micronuclear linker histone polyprotein-like [Solanum tuberosum] |
| JMFF027L10 | Sequence | 539 | 007398 (9) | ref|XP_006348433.1| | 4e-06 | PREDICTED: micronuclear linker histone polyprotein-like isoform X1 [Solanum tub | 734 | 013833 (13) | ref|XP_006339180.1| | 4e-21 | PREDICTED: micronuclear linker histone polyprotein-like [Solanum tuberosum] |
| JMFF041B11 | Sequence | 617 | 007398 (9) | ref|XP_006348433.1| | 2e-12 | PREDICTED: micronuclear linker histone polyprotein-like isoform X1 [Solanum tub | 555 | 013833 (13) | |||
| JMFF050G24 | Sequence | 633 | 007398 (9) | ref|XP_006348433.1| | 8e-08 | PREDICTED: micronuclear linker histone polyprotein-like isoform X1 [Solanum tub | 522 | 013833 (13) | |||
| JMFS030F12 | Sequence | 568 | 007398 (9) | ref|XP_006348433.1| | 9e-08 | PREDICTED: micronuclear linker histone polyprotein-like isoform X1 [Solanum tub | |||||
| JMSF006P02 | Sequence | 296 | 007398 (9) | 395 | 013833 (13) | ||||||
| JMSF011J13 | Sequence | 421 | 007398 (9) | 765 | 013833 (13) | ref|XP_009791345.1| | 1e-30 | PREDICTED: rab11 family-interacting protein 1-like [Nicotiana sylvestris] | |||
| JMSF036D13 | Sequence | 646 | 007398 (9) | ref|XP_006348433.1| | 8e-10 | PREDICTED: micronuclear linker histone polyprotein-like isoform X1 [Solanum tub | 744 | 013833 (13) | |||
This contig is upended
. : . : . : . : . : . :
JMFF041B11+ AAGAACACTCGATGCCACTGGTAAAGTTCTTCTTCTATGGGTTGT
____________________________________________________________
consensus AAGAACACTCGATGCCACTGGTAAAGTTCTTCTTCTATGGGTTGT
. : . : . : . : . : . :
JMFF026J23+ TCAAGACACCCGAGGCACGCCTTCCGGCTGGGCT
JMFF041B11+ TCCTCCAACATTGATGTTAGCACTCTTCAAGACACCCGAGGCACGCCTTCCGGCTGGGCT
JMFF050G24+ TCAAGACACCCGAGGCACGCCTTCCGGCTGGGC-
JMSF036D13+ TCCTCCAACATTGATGTTAGCACTCTTCAAGACACCCGAGGCACGCCTTCCGGCTGGGCT
____________________________________________________________
consensus TCCTCCAACATTGATGTTAGCACTCTTCAAGACACCCGAGGCACGCCTTCCGGCTGGGCT
. : . : . : . : . : . :
JMFF026J23+ GGAATGGGGAACCGGTTTTTCTGTGGCATTTGAAAGCGACCCCCCCTTGGCACTCGGTTT
JMFF021A19+ CACTCGGTTT
JMFS030F12+ CCCCCTTGGCACTCGGTTT
JMFF041B11+ GGAATGGGGAACCGGTTTTTCTGTGGCATTTGAAAGCGACCCCCCCTTGGCACTCGGTTT
JMFF050G24+ GGAATGGGGAACCGG-TTTTCTGTGGCA-TTGAAAGCGACCCCCCCTTGGCACTCGGTTT
JMSF036D13+ GGAATGGGGAACCGGTTTTTCTGTGGCATTTGAAAGCGACCCCCCCTTGGCACTCGGTTT
____________________________________________________________
consensus GGAATGGGGAACCGGTTTTTCTGTGGCATTTGAAAGCGACCCCCCCTTGGCACTCGGTTT
. : . : . : . : . : . :
JMFF026J23+ CTTTGGATACACATCAATGCTTTTCCTCATCACATCAGAACTAACGCCTTTTGCAGGGAA
JMFF021A19+ CTTTGGATACACATCAATGCTTTTCCTCATCACATCAGAACTAACGCCTTTTGCAGGGAA
JMFS030F12+ CTTTGGATACACATCAATGCTTTTCCTCATCACATCAGAACTAACGCCTTTTGCAGGGAA
JMFF041B11+ CTTTGGATACACATCAATGCTTTTCCTCATCACATCAGAACTAACGCCTTTTGCAGGGAA
JMFF050G24+ CTTTGGATACACATCAATGCTTTTCCTCATCACATCAGAACTAACGCCTTTTGCAGGGAA
JMSF036D13+ CTTNGGATACACATCAATGCTTTTCCTCATCACATCAGAACTAACGCCTTTTGCAGGGAA
JMFF027L10+ TTTGGATACACATCAATGCTTTTCCTCATCACATCAGAACTAACGCCTTTTGCAGGGAA
____________________________________________________________
consensus CTTTGGATACACATCAATGCTTTTCCTCATCACATCAGAACTAACGCCTTTTGCAGGGAA
. : . : . : . : . : . :
JMFF026J23+ CGAGAGACTCTGGGTCAGGCTTGTCGTCGTCCTTTTCGCACGAGCCATTCCAGCCGAGCC
JMFF021A19+ CGAGAGACTCTGGGTCAGGCTTGTCGTCGTCCTTTTCGCACGAGCCATTCCAGCCGAGCC
JMFS030F12+ CGAGAGACTCTGGGTCAGGCTTGTCGTCGTCCTTTTCGCACGAGCCATTCCAGCCGAGCC
JMFF041B11+ CGAGAGACTCTGGGTCAGGCTTGTCGTCGTCCTTTTCGCACGAGCCATTCCAGCCGAGCC
JMFF050G24+ CGAGAGACTCTGGGTCAGGCTTGTCGTCGTCCTTTTCGCACGAGCCATTCCAGCCGAGCC
JMSF036D13+ CGAGAGACTCTGGGTCAGGCTTGTCGTCGTCCTTTTCGCACGAGCCATTCCAGCCGAGCC
JMFF027L10+ CGAGAGACTCTGGGTCAGGCTTGTCGTCGTCCTTTTCGCACGAGCCATTCCAGCCGAGCC
____________________________________________________________
consensus CGAGAGACTCTGGGTCAGGCTTGTCGTCGTCCTTTTCGCACGAGCCATTCCAGCCGAGCC
. : . : . : . : . : . :
JMFF026J23+ TCTCGAACTCGCCTGATCCTTCTTCGGTCTACTACCCTTCGAAGAAGCAGTAGTAGAAGA
JMFF021A19+ TCTNGAACTCGCCTGATCCTTCTTCGGTCTACTACCCTTCGAAGAAGCAGTAGTAGAAGA
JMFS030F12+ TCTCGAACTCGCCTGATCCTTCTTCGGTCTACTACCCTTCGAAGAAGCAGTAGTAGAAGA
JMFF041B11+ TCTCGAACTCGCCTGATCCTTCTTCGGTCTACTACCCTTCGAAGAAGCAGTAGTAGAAGA
JMFF050G24+ TCTCGAACTCGCCTGATCCTTCTTCGGTCTACTACCCTTCGAAGAAGCAGTAGTAGAAGA
JMSF011J13+ TCTACTACCCTTCGAAGAAGCAGTAGTAGAAGA
JMSF036D13+ TCTCGAACTCGCCTGATCCTTCTTCGGTCTACTACCCTTCGAAGAAGCAGTAGTAGAAGA
JMFF027L10+ TCTCGAACTCGCCTGATCCTTCTTCGGTCTACTACCCTTCGAAGAAGCAGTAGTAGAAGA
____________________________________________________________
consensus TCTCGAACTCGCCTGATCCTTCTTCGGTCTACTACCCTTCGAAGAAGCAGTAGTAGAAGA
. : . : . : . : . : . :
JMFF026J23+ CACTTTACTTTTCGAAACATTCCTAGAGGATTCGGTTTTCGCTACAGATACTTTGGGTGC
JMFF021A19+ CACTTTACTTTTCGAAACATTCCTAGAGGATTCGGTTTTCGCTACAGATACTTTGGGTGC
JMFS030F12+ CACTTTACTTTTCGAAACATTCCTAGAGGATTCGGTTTTCGCTACAGATACTTTGGGTGC
JMFF041B11+ CACTTTACTTTTCGAAACATTCCTAGAGGATTCGGTTTTCGCTACAGATACTTTGGGTGC
JMFF050G24+ CACTTTACTTTTCGAAACATTCCTAGAGGATTCGGTTTTCGCTACAGATACTTTGGGTGC
JMSF011J13+ CACTTTACTTTTCGAAACATTCCTAGAGGATTCGGTTTTCGCTACAGATACTTTGGGTGC
JMSF036D13+ CACTTTACTTTTCGAAACATTCCTAGAGGATTCGGTTTTCGCTACAGATACTTTGGGTGC
JMFF027L10+ CACTTTACTTTTCGAAACATTCCTAGAGGATTCGGTTTTCGCTACAGATACTTTGGGTGC
____________________________________________________________
consensus CACTTTACTTTTCGAAACATTCCTAGAGGATTCGGTTTTCGCTACAGATACTTTGGGTGC
. : . : . : . : . : . :
JMFF026J23+ TTCATTAACCACAATCTCATCCCCAACAACTTCACTTTCACTAGCTTTCTCACCCAGAAT
JMFF021A19+ TTCATTAACCACAATCTCATCCCCAACAACTTCACTTTCACTAGCTTTCTCACCCAGAAT
JMFS030F12+ TTCATTAACCACAATCTCATCCCCAACAACTTCACTTTCACTAGCTTTCTCACCCAGAAT
JMFF041B11+ TTCATTAACCACAATCTCATCCCCAACAACTTCACTTTCACTAGCTTTCTCACCCAGAAT
JMFF050G24+ TTCATTAACCACAATCTCATCCCCAACAACTTCACTTTCACTAGCTTTCTCACCCAGAAT
JMSF011J13+ TTCATTAACCACAATCTCATCCCCAACAACTTCACTTTCACTAGCTTTCTCACCCAGAAT
JMSF036D13+ TTCATTAACCACAATCTCATCCCCAACAACTTCACTTTCACTAGCTTTCTCACCCAGAAT
JMFF027L10+ TTCATTAACCACAATCTCATCCCCAACAACTTCACTTTCACTAGCTTTCTCACCCAGAAT
____________________________________________________________
consensus TTCATTAACCACAATCTCATCCCCAACAACTTCACTTTCACTAGCTTTCTCACCCAGAAT
. : . : . : . : . : . :
JMFF026J23+ TCCCTCTTTCTCCTCCACACCCACATTTTCATTCTCAATAACAGGATCCATTTCCTCTTT
JMFF021A19+ TCCCTCTTTCTCCTCCACACCCACATTTTCATTCTCAATAACAGGATCCATTTCCTCTTT
JMFS030F12+ T-CCTCTTTCTCCTCCACACCCACATTTTCATTCTCAATAACAGGATCCATTTCCTCTTT
JMFF041B11+ TCCCTCTTTCTCCTCCACACCCACATTTTCATTCTCAATAACAGGATCCATTTCCTCTTT
JMFF050G24+ TCCCTCTTTCTCCTCCACACCCACATTTTCATTCTCAATAACAGGATCCATTTCCTCTTT
JMSF011J13+ TCCCTCTTTCTCCTCCACACCCACATTTTCATTCTCAATAACAGGATCCATTTCCTCTTT
JMSF006P02+ CTCCACACCCACANTTTCATTCTCAATAACAAGATCCATTTCCTCTTT
JMSF036D13+ TCCCTCTTTCTCCTCCACACCCACATTTTCATTCTCAATAACAGGATCCATTTCCTCTTT
JMFF027L10+ TCCCTCTTTCTCCTCCACACCCACATTTTCATTCTCAATAACAGGATCCATTTCCTCTTT
____________________________________________________________
consensus TCCCTCTTTCTCCTCCACACCCACATTTTCATTCTCAATAACAGGATCCATTTCCTCTTT
. : . : . : . : . : . :
JMFF026J23+ CACCACAGCCATGATTTCTGAGACCATCTAGGACAATTATCTTGTGCGTAAGC
JMFF021A19+ CACCACAGCCATGATTTCTGAGGCCATCTAGGACAATTATCTTGTGCGTAAGCAAGAGTG
JMFS030F12+ CACCACAGCCATGATTTCTGAGGCCATCTAGGACAATTATCT
JMFF041B11+ CACCACAGCCATGATTTCTGAGGCCATCTAGGACAATTATCTTGTGCGTAAGCAAGAGTG
JMFF050G24+ CACCACAGCCATGATTTCTGAGGCCATCTAGGACAATTATCTTGTGCGTAAGCAAGAGTG
JMSF011J13+ CACCACAGCCATGATTTCTGAGGCCATCTAGGACAATTATCT
JMSF006P02+ CACCACAGCCATGATTTCTGAGGCCATCTAGGACAATTATCT
JMSF036D13+ CACCACAGCCATGATTTCTGAGGCCATCTAGGACAATTATCTTGTGCGTAAGCAAGAGTG
JMFF027L10+ CACCACAGCCATGATTTCTGAGGCCATCTAGGACAATTATCTTGTGCGTAAGCAAGAGTG
____________________________________________________________
consensus CACCACAGCCATGATTTCTGAGGCCATCTAGGACAATTATCTTGTGCGTAAGCAAGAGTG
. : . : . : . : . : . :
JMFF021A19+ AGAATTACTATGGCTTCGGAATTTC
JMFF041B11+ AGAATTACTATGGCTTCGGAATTTCAAATTCT
JMFF050G24+ AGAATTACTATGGCTTCGGAATTTCAAATTCTACTTTGCAATGAAAAGTCGGTTAGATAT
JMSF036D13+ AGAATTACTATGGCTTCGGAATTTCAAATTCTACTTTGCAATGAAAAGTCGGTTAGATAT
JMFF027L10+ AGAATTACTATGGCTTCGGAATTTCAAATTCTACTTTGCAATGAAAAGTCGGTTAGATAT
____________________________________________________________
consensus AGAATTACTATGGCTTCGGAATTTCAAATTCTACTTTGCAATGAAAAGTCGGTTAGATAT
. : . : . : . : . : . :
JMFF050G24+ ACTGAAACCAGGGGGGGAAGAGAGTAAGAGAGACGGTTCGAC
JMSF036D13+ ACTGAAACCAGGGGGGGAAGAGAGTAAGAGAGACGGTTCGAC
JMFF027L10+ ACTGAAACCAGGGGGGGAAGAGAGTAAGAGAGACGGTTCGACGAAGAATGTTAAAACAAC
____________________________________________________________
consensus ACTGAAACCAGGGGGGGAAGAGAGTAAGAGAGACGGTTCGACGAAGAATGTTAAAACAAC