| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF003H12 | Sequence | 616 | 007394 (5) | ref|XP_010031356.1| | 8e-111 | PREDICTED: pyruvate kinase, cytosolic isozyme [Eucalyptus grandis] ref|XP_010031 | 696 | 008314 (5) | ref|XP_004489183.1| | 5e-114 | PREDICTED: pyruvate kinase, cytosolic isozyme-like [Cicer arietinum] |
| JMFF007F07 | Sequence | 604 | 007394 (5) | ref|XP_010031356.1| | 6e-96 | PREDICTED: pyruvate kinase, cytosolic isozyme [Eucalyptus grandis] ref|XP_010031 | 735 | 008314 (5) | ref|XP_004489183.1| | 4e-127 | PREDICTED: pyruvate kinase, cytosolic isozyme-like [Cicer arietinum] |
| JMFF014K22 | Sequence | 571 | 007394 (5) | ref|XP_010031356.1| | 4e-80 | PREDICTED: pyruvate kinase, cytosolic isozyme [Eucalyptus grandis] ref|XP_010031 | |||||
| JMFF026O13 | Sequence | 604 | 007394 (5) | ref|XP_010031356.1| | 6e-96 | PREDICTED: pyruvate kinase, cytosolic isozyme [Eucalyptus grandis] ref|XP_010031 | 742 | 008314 (5) | ref|XP_004489183.1| | 3e-142 | PREDICTED: pyruvate kinase, cytosolic isozyme-like [Cicer arietinum] |
| JMFF042N01 | Sequence | 625 | 007394 (5) | ref|XP_010031356.1| | 5e-90 | PREDICTED: pyruvate kinase, cytosolic isozyme [Eucalyptus grandis] ref|XP_010031 | 404 | 008314 (5) | gb|AFK43671.1| | 2e-15 | unknown [Lotus japonicus] |
This contig is upended
. : . : . : . : . : . :
JMFF042N01+ GGGAAGGTTTACATTCTTCCTTTC
____________________________________________________________
consensus GGGAAGGTTTACATTCTTCCTTTC
. : . : . : . : . : . :
JMFF042N01+ ACNTAACATGGCAGTGTTCTCACAGCGGCATCTTACAGTTCCAGCAGCTGAATCACGCGA
JMFF014K22+ TCTTACAGTTCCAGCAGCTGAATCACGCGA
JMFF003H12+ CATGGCAGTGTTCTCACAGCGGCATCTTACAGTTCCAGCAGCTGAATCACACGA
____________________________________________________________
consensus ACNTAACATGGCAGTGTTCTCACAGCGGCATCTTACAGTTCCAGCAGCTGAATCACGCGA
. : . : . : . : . : . :
JMFF042N01+ CAGAACAGTGAGTGTTATGGTGCCATCTGCACATAAGATGGTATTCCCAGGCTTCAGATC
JMFF014K22+ CAGAACAGTGAGTGTTATGGTGCCATCTGCACATAAGATGGTATTCCCAGGCTTCAGATC
JMFF003H12+ CAGAACAGTGAGTGTTATGGTGCCATCTGCACATAAGATGGTATTCCCAGGCTTCAGATC
JMFF007F07+ CAGTGAGTGTTATGGTGCCATCTGCACATAAGATGGTATTCCCAGGCTTCAGATC
JMFF026O13+ CAGTGAGTGTTATGGTGCCATCTGCACATAAGATGGTATTCCCAGGCTTCAGATC
____________________________________________________________
consensus CAGAACAGTGAGTGTTATGGTGCCATCTGCACATAAGATGGTATTCCCAGGCTTCAGATC
. : . : . : . : . : . :
JMFF042N01+ CACCGCTAATTTTTTTATAGCTCATGCATATCATCTCTTCATCTCCCTTTATGGTATAGT
JMFF014K22+ CACCGCTAATTTTTTTATAGCTCATGCATATCATCTCTTCATCTCCTTTTATGGTATAGT
JMFF003H12+ CACCGCTAA-TTTTTTATAGCTCATGCATATCATCTCTTCATCTCCTTTTATGGTATAGT
JMFF007F07+ CACCGCTAA-TTTTTTATAGCTCATGCATATCATCTCTTCATCTCCTTTTATGGTATAGT
JMFF026O13+ CACCGCTAA-TTTTTTATAGCTCATGCATATCATCTCTTCATCTCCTTTTATGGTATAGT
____________________________________________________________
consensus CACCGCTAA-TTTTTTATAGCTCATGCATATCATCTCTTCATCTCCTTTTATGGTATAGT
. : . : . : . : . : . :
JMFF042N01+ CAGTGGTCACTGTGATTTCTTCGCCTTCCTTGAGTTGTATAGGTTTTCCATCCTTCAAGA
JMFF014K22+ CAGTGGTCACTGTGATTTCTTCGCCTTCCTTGAGTTGTATAGGTTTTCCATCCTTCAAGA
JMFF003H12+ CAGTGGTCACTGTGATTTCTTCGCCTTCCTTGAGTTGTATAGGTTTTCCATCCTTCAAGA
JMFF007F07+ CAGTGGTCACTGTGATTTCTTCGCCTTCCTTGAGTTGTATAGGTTTTCCATCCTTCAAGA
JMFF026O13+ CAGTGGTCACTGTGATTTCTTCGCCTTCCTTGAGTTGTATAGGTTTTCCATCCTTCAAGA
____________________________________________________________
consensus CAGTGGTCACTGTGATTTCTTCGCCTTCCTTGAGTTGTATAGGTTTTCCATCCTTCAAGA
. : . : . : . : . : . :
JMFF042N01+ AGCCAGTTCGGATCTCAGGCCCCTTGGTATCAAGCATGACAGCACAGAGGATCTGGGTGT
JMFF014K22+ AGCCAGTTCGGATCTCAGGCCCCTTGGTATCAAGCATGACAGCACAGAGGATCTGGGTGT
JMFF003H12+ AGCCAGTTCGGATCTCAGGCCCCTTGGTATCAAGCATGACAGCACAGAGGATCTGGGTGT
JMFF007F07+ AGCCAGTTCGGATCTCAGGCCCCTTGGTATCAAGCATGACAGCACAGAGGATCTGGGTGT
JMFF026O13+ AGCCAGTTCGGATCTCAGGCCCCTTGGTATCAAGCATGACAGCACAGAGGATCTGGGTGT
____________________________________________________________
consensus AGCCAGTTCGGATCTCAGGCCCCTTGGTATCAAGCATGACAGCACAGAGGATCTGGGTGT
. : . : . : . : . : . :
JMFF042N01+ TGTGCATAGCAATCTTAAGATTGTTTAAGGTTTCCTGGTGGTACTCATGGGTCCCATGAG
JMFF014K22+ TGTGCATAGCAATCTTAAGATTGTTTAAGGTTTCCTGGTGGTACTCATGGGTCCCATGAG
JMFF003H12+ TGTGCATAGCAATCTTAAGATTGTTTAAGGTTTCCTGGTGGTACTCATGGGTCCCATGAG
JMFF007F07+ TGTGCATAGCAATCTTAAGATTGTTTAAGGTTTCCTGGTGGTACTCATGGGTCCCATGAG
JMFF026O13+ TGTGCATAGCAATCTTAAGATTGTTTAAGGTTTCCTGGTGGTACTCATGGGTCCCATGAG
____________________________________________________________
consensus TGTGCATAGCAATCTTAAGATTGTTTAAGGTTTCCTGGTGGTACTCATGGGTCCCATGAG
. : . : . : . : . : . :
JMFF042N01+ AGAAGTTGAACCTAGCAACATTCATGCCAGCCCGAAGAAGCTTCTCGAGCATAGGAACGG
JMFF014K22+ AGAAGTTGAACCTAGCAACATTCATGCCAGCCCGAAGAAGCTTCTCGAGCATAGGAACGG
JMFF003H12+ AGAAGTTGAACCTAGCAACATTCATGCCAGCCCGAAGAAGCTTCTCGAGCATAGGAACGG
JMFF007F07+ AGAAGTTGAACCTAGCAACATTCATGCCAGCCCGAAGAAGCTTCTCGAGCATAGGAACGG
JMFF026O13+ AGAAGTTGAACCTAGCAACATTCATGCCAGCCCGAAGAAGCTTCTCGAGCATAGGAACGG
____________________________________________________________
consensus AGAAGTTGAACCTAGCAACATTCATGCCAGCCCGAAGAAGCTTCTCGAGCATAGGAACGG
. : . : . : . : . : . :
JMFF042N01+ ACCGAGAAGCCGGTCCCAATGTGCAGACAATCTTTGTCTTAGGAACACAGCCATCACTTG
JMFF014K22+ ACCGAGAAGCCGGTCCCAATGTGCAGACAATCTTTGTCTTAGGAACACAGCCATCACTTG
JMFF003H12+ ACCGAGAAGCCGGTCCCAATGTGCAGACAATCTTTGTCTTAGGAACACAGCCATCACTTG
JMFF007F07+ ACCGAGAAGCCGGTCCCAATGTGCAGACAATCTTTGTCTTAGGAACACAGCCATCACTTG
JMFF026O13+ ACCGAGAAGCCGGTCCCAATGTGCAGACAATCTTTGTCTTAGGAACACAGCCATCACTTG
____________________________________________________________
consensus ACCGAGAAGCCGGTCCCAATGTGCAGACAATCTTTGTCTTAGGAACACAGCCATCACTTG
. : . : . : . : . : . :
JMFF042N01+ GGACCTCCTTCAAGATTCCTTCGATGTCTATGTTTGACATTTCTCCAACAGAATCCTTGA
JMFF014K22+ GGACCTCCTTCAAGATTCCTTCGATGTCTATGTTTGACATTTCTCCAACAGAATCCTTGA
JMFF003H12+ GGACCTCCTTCAAGATTCCTTCGATGTCTATGTTTGACATTTCTCCAACAGAATCCTTGA
JMFF007F07+ GGACCTCCTTCAAGATTCCTTCGATGTCTATGTTTGACATTTCTCCAACAGAATCCTTGA
JMFF026O13+ GGACCTCCTTCAAGATTCCTTCGATGTCTATGTTTGACATTTCTCCAACAGAATCCTTGA
____________________________________________________________
consensus GGACCTCCTTCAAGATTCCTTCGATGTCTATGTTTGACATTTCTCCAACAGAATCCTTGA
. : . : . : . : . : . :
JMFF042N01+ GTAGGGGAGAATCTTGAGTGAGAAAATGGAATAAACTGAGATCTGTATCCTTGTTCTTC
JMFF014K22+ GTAGGGGAGAATCTTGAGTGAGAAAATGGAATAAACTGAGATCTGTATCCTTATTCTTCT
JMFF003H12+ GTAGGGGAGAATCTTGAGTGAGAAAATGGAATAAACTGAGATCTGTATCCTTATTCTTCT
JMFF007F07+ GTAGGGGAGAATCTTGAGTGAGAAAATGGAATAAACTGAGATCTGTATCCTTATTCTTCT
JMFF026O13+ GTAGGGGAGAATCTTGAGTGAGAAAATGGAATAAACTGAGATCTGTATCCTTATTCTTCT
____________________________________________________________
consensus GTAGGGGAGAATCTTGAGTGAGAAAATGGAATAAACTGAGATCTGTATCCTTATTCTTCT
. : . : . : . : . : . :
JMFF014K22+ C
JMFF003H12+ CAGAAAAAGTAGCTCTCCGTAAT
JMFF007F07+ CAGAAAAAGTAGCTCTCCGTAATAGTGTAATATAGTACTCCGTAGAAGAGTAGTTGAAAT
JMFF026O13+ CAGAAAAAGTAGCTCTCCGTAATAGTGTAATATAGTACTCCGTAGAAGAGTAGTTGAAAT
____________________________________________________________
consensus CAGAAAAAGTAGCTCTCCGTAATAGTGTAATATAGTACTCCGTAGAAGAGTAGTTGAAAT