Contig 007392:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF026H17Sequence519007392 (5)ref|XP_009777394.1|2e-61PREDICTED: putative clathrin assembly protein At2g01600 [Nicotiana sylvestris]704006936 (7)ref|XP_006355077.1|1e-52PREDICTED: putative clathrin assembly protein At2g01600-like [Solanum tuberosum
JMFF043F23Sequence634007392 (5)ref|XP_006355077.1|2e-114PREDICTED: putative clathrin assembly protein At2g01600-like [Solanum tuberosum588006936 (7)ref|XP_006355077.1|3e-37PREDICTED: putative clathrin assembly protein At2g01600-like [Solanum tuberosum
JMSF018O22Sequence302007392 (5)gb|EPS74138.1|3e-45hypothetical protein M569_00617, partial [Genlisea aurea]764006936 (7)ref|XP_006355077.1|3e-71PREDICTED: putative clathrin assembly protein At2g01600-like [Solanum tuberosum
JMSF023O22Sequence689007392 (5)ref|XP_009777394.1|6e-126PREDICTED: putative clathrin assembly protein At2g01600 [Nicotiana sylvestris]768006936 (7)ref|XP_006355077.1|2e-57PREDICTED: putative clathrin assembly protein At2g01600-like [Solanum tuberosum
JMSF041C06Sequence789007392 (5)ref|XP_009627948.1|2e-166PREDICTED: putative clathrin assembly protein At2g01600 [Nicotiana tomentosifor747006936 (7)ref|XP_006355077.1|7e-55PREDICTED: putative clathrin assembly protein At2g01600-like [Solanum tuberosum

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF041C06+ TCGTGGCATCTCGAA
                      ____________________________________________________________
consensus TCGTGGCATCTCGAA
 
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JMSF041C06+ AAACTTGTCAACAAGATTAATTATTCCGTCATTGATAGCACAGTAAATTTTAAAGCTCTC
                      ____________________________________________________________
consensus AAACTTGTCAACAAGATTAATTATTCCGTCATTGATAGCACAGTAAATTTTAAAGCTCTC
 
. : . : . : . : . : . :
JMSF041C06+ CTTGAGGACCAGGGCTAGTGCATACTGTATCACATAATTTCCAACAGCAGCTCCTTCAGG
                      ____________________________________________________________
consensus CTTGAGGACCAGGGCTAGTGCATACTGTATCACATAATTTCCAACAGCAGCTCCTTCAGG
 
. : . : . : . : . : . :
JMSF041C06+ CCGGCATCCAATAAGGCGATAGAGCAACTGCTGCAAAGCTGGCAACTGGTCCAGAAGCTC
JMSF023O22+ GATAGAGCAACTGCTGCAAAGCTGGCAACTGGTCCAGAAGCTC
                      ____________________________________________________________
consensus CCGGCATCCAATAAGGCGATAGAGCAACTGCTGCAAAGCTGGCAACTGGTCCAGAAGCTC
 
. : . : . : . : . : . :
JMSF041C06+ TTCACTGTTCAATTCTCTAGTTTTGCTGTAGCCCTTTTCTTGCCCCTGGGCAGGAGGTTT
JMSF023O22+ TTCACTGTTCAATTCTCTAGTTTTGCTGTAGCCCTTTTCTNGCCCCTGGGCAGGAGGTTT
JMFF043F23+ TT
                      ____________________________________________________________
consensus TTCACTGTTCAATTCTCTAGTTTTGCTGTAGCCCTTTTCTTGCCCCTGGGCAGGAGGTTT
 
. : . : . : . : . : . :
JMSF041C06+ AGGAAGCCGCTCAGCTTCAATGTCATACTTGAGAACCCTAAAACACTCAAGCCGTTCTTC
JMSF023O22+ AGGAAGCCGCTCAGCTTCAATGTCATACTTGAGAACCCTAAAACACTCAAGCCGTTCTTC
JMFF043F23+ AGGAAGCCGCTCAGCTTCAATGTCATACTTGAGAACCCTAAAACACTCAAGCCGTTCTTC
                      ____________________________________________________________
consensus AGGAAGCCGCTCAGCTTCAATGTCATACTTGAGAACCCTAAAACACTCAAGCCGTTCTTC
 
. : . : . : . : . : . :
JMSF041C06+ CAAAAAGAGTGCATATGTGCGTACCCATGCAGAGCAATCCCAAGCAATAGGGCTTGAATC
JMSF023O22+ CAAAAAGAGTGCATATGTGCGTACCCATGCAGAGCAATCCCAAGCAATAGGGCTTGAATC
JMFF043F23+ CAAAAAGAGTGCATATGTGCGTACCCATGCAGAGCAATCCCAAGCAATAGGGCTTGAATC
                      ____________________________________________________________
consensus CAAAAAGAGTGCATATGTGCGTACCCATGCAGAGCAATCCCAAGCAATAGGGCTTGAATC
 
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JMSF041C06+ ATCCTTGAAATTGGACATTTGAAGAACACGACCTCTTTGCTGGAAATTCAGAAGTTCCTC
JMSF023O22+ ATCCTTGAAATTGGACATTTGAAGAACACGACCTCTTTGCTGGAAATTCAGAAGTTCCTC
JMFF043F23+ ATCCTTGAAATTGGACATTTGAAGAACACGACCTCTTTGCTGGAAATTCAGAAGTTCCTC
                      ____________________________________________________________
consensus ATCCTTGAAATTGGACATTTGAAGAACACGACCTCTTTGCTGGAAATTCAGAAGTTCCTC
 
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JMSF041C06+ ACGAAATGTGGGATCACCTTCCCTCAATGTTCTATGGATTACTATGAGTGTTTTCAGTGC
JMSF023O22+ ACGAAATGTGGGATCACCTTCCCTCAATGTTCTATGGATTACTATGAGTGTTTTCAGTGC
JMFF043F23+ ACGAAATGTGGGATCACCTTCCCTCAATGTTCTATGGATTACTATGAGTGTTTTCAGTGC
JMFF026H17+ TCAATGTTCTATGGATTACTATGAGTGTTTTCAGTGC
                      ____________________________________________________________
consensus ACGAAATGTGGGATCACCTTCCCTCAATGTTCTATGGATTACTATGAGTGTTTTCAGTGC
 
. : . : . : . : . : . :
JMSF041C06+ CACCGTCCAGTTGTGTGTCTTTGCTAATCTCCGAGCAAGTGCATGAATGCAGTATGCAAC
JMSF023O22+ CACCGTCCAGTTGTGTGTCTTTGCTAATCTCCGAGCAAGTGCATGAATGCAGTATGCAAC
JMSF018O22+ CTCCGAGCAAGTGCATGAATGCAGTATGCAAC
JMFF043F23+ CACCGTCCAGTTGTGTGTCTTTGCTAATCTCCGAGCAAGTGCATGAATGCAGTATGCAAC
JMFF026H17+ CACCGTCCAGTTGTGTGTCTTTGCTAATCTCCGAGCAAGTGCATGAATGCAGTATGCAAC
                      ____________________________________________________________
consensus CACCGTCCAGTTGTGTGTCTTTGCTAATCTCCGAGCAAGTGCATGAATGCAGTATGCAAC
 
. : . : . : . : . : . :
JMSF041C06+ ATCAGCCCTAGGCCGCACTGCAGATGTATAAACCATAATTTTTCTGAGATGTCGCTCTTT
JMSF023O22+ ATCAGCCCTAGGCCGCACTGCAGATGTATAAACCATAATTTTTCTGAGATGTCGCTCTTT
JMSF018O22+ ATCAGCCCTAGGCCGCACTGCAGATGTATAAACCATAATTTTTCTGAGATGTCGCTCTTT
JMFF043F23+ ATCAGCCCTAGGCCGCACTGCAGATGTATAAACCATAATTTTTCTGAGATGTCGCTCTTT
JMFF026H17+ ATCAGCCCTAGGCCGCACTGCAGATGTATAAACCATAATTTTTCTGAGATGTCGCTCTTT
                      ____________________________________________________________
consensus ATCAGCCCTAGGCCGCACTGCAGATGTATAAACCATAATTTTTCTGAGATGTCGCTCTTT
 
. : . : . : . : . : . :
JMSF041C06+ GGGTGGGCACTCAACATGATTAGTAGCCTTAACGATCGCCACATCGACATCCTTGAAATC
JMSF023O22+ GGGTGGGCACTCAACATGATTAGTAGCCTTAACGATCGCCACATCGACATCCTTGAAATC
JMSF018O22+ GGGTGGGCACTCAACATGATTAGTAGCCTTAACGATCGCCACATCGACATCCTTGAAATC
JMFF043F23+ GGGTGGGCACTCAACATGATTAGTAGCCTTAACGATCGCCACATCGACATCCTTGAAATC
JMFF026H17+ GGGTGGGCACTCAACATGATTAGTAGCCTTAACGATCGCCACATCGACATCCTTGAAATC
                      ____________________________________________________________
consensus GGGTGGGCACTCAACATGATTAGTAGCCTTAACGATCGCCACATCGACATCCTTGAAATC
 
. : . : . : . : . : . :
JMSF041C06+ GCTATTGACATGGGCGAGGCCGACTTTGGTGTGATCTTTGAGCGCCCCGTAAGCTTTCCT
JMSF023O22+ GCTATTGACATGGGCGAGGCCGACTTTGGTGTGATCTTTGAGCGCCCCGTAAGCTTTCCT
JMSF018O22+ GCTATTGACATGGGCGAGGCCGACTTTGGTGTGATCTTTGAGCGCCCCGTAAGCTTTCCT
JMFF043F23+ GCTATTGACATGGGCGAGGCCGACTTTGGTGTGATCTTTGAGCGCCCCGTAAGCTTTCCT
JMFF026H17+ GCTATTGACATGGGCGAGGCCGACTTTGGTGTGATCTTTGAGCGCCCCGTAAGCTTTCCT
                      ____________________________________________________________
consensus GCTATTGACATGGGCGAGGCCGACTTTGGTGTGATCTTTGAGCGCCCCGTAAGCTTTCCT
 
. : . : . : . : . : . :
JMSF041C06+ CCATGTTTGTAGCGTACCCATCTCTCTCTCTACACCGTTGGCTCCCGATCCCTC
JMSF023O22+ CCATGTTTGTAGCGTACCCATCTCTCTCTCTACACCGTTGGCTCCCGATCCCTCTGTGAT
JMSF018O22+ CCATGTTTGTAGCGTACCCATCTCTCTCTCTACACCGTTGGCTCCCGATCCCTCTGTGAT
JMFF043F23+ CCATGTTTGTAGCGTACCCATCTCTCTCTCTACACCGTTGGCTCCCGATCCCTCTGTGAT
JMFF026H17+ CCATGTTTGTAGCGTACCCATCTCTCTCTCTACACCGTTGGCTCCCGATCCCTCTGTGAT
                      ____________________________________________________________
consensus CCATGTTTGTAGCGTACCCATCTCTCTCTCTACACCGTTGGCTCCCGATCCCTCTGTGAT
 
. : . : . : . : . : . :
JMSF023O22+ CTCTCTCTCTAGAAGATTTCTTGAGGCCTGGAATTTTTCTCCAGT
JMSF018O22+ CTCTCTCTCTAGAAGATTTCTTGAGGCCT
JMFF043F23+ CTCTCTCTCTAGAAGATTTCTTGAGGCCTGGAATTTTTCTCCAGTGAGGACAAGAGAGAG
JMFF026H17+ CTCTCTCTCTAGAAGATTTCTTGAGGCCTGGAATTTTTCTCCAGTGAGGACAAGAGAGAG
                      ____________________________________________________________
consensus CTCTCTCTCTAGAAGATTTCTTGAGGCCTGGAATTTTTCTCCAGTGAGGACAAGAGAGAG
 
. : . : . : . : . : . :
JMFF043F23+ AAGCAAACAACTTTTTGGGGC
JMFF026H17+ AAGCAAACAACTTTTTGGGGCAAAATTCTTTCAATCAGTTGGACCGGGGTGGCTTTTGGC
                      ____________________________________________________________
consensus AAGCAAACAACTTTTTGGGGCAAAATTCTTTCAATCAGTTGGACCGGGGTGGCTTTTGGC
 
. : . : . : . : . : . :
JMFF026H17+ GGCCCCTCCAATTGGGTGTCTCATCATTTTGCTTATTCATTCAATTCAATGAAATGGAAT
                      ____________________________________________________________
consensus GGCCCCTCCAATTGGGTGTCTCATCATTTTGCTTATTCATTCAATTCAATGAAATGGAAT