Contig 007373:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF022N14Sequence555007373 (2)ref|XP_009790185.1|109PREDICTED: uncharacterized protein LOC104237691 [Nicotiana sylvestris]592002587 (2)ref|XP_009790185.1|99.4PREDICTED: uncharacterized protein LOC104237691 [Nicotiana sylvestris]
JMSF024G06Sequence670007373 (2)ref|XP_009790185.1|147PREDICTED: uncharacterized protein LOC104237691 [Nicotiana sylvestris]737002587 (2)ref|XP_009790185.1|160PREDICTED: uncharacterized protein LOC104237691 [Nicotiana sylvestris]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF024G06+ ATTTCGGAATTC
                      ____________________________________________________________
consensus ATTTCGGAATTC
 
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JMSF024G06+ CCACCCAGATTCATATACTCAGATAAGCAACCCATCGACTTAGGCATAGGCGAAAACAAA
                      ____________________________________________________________
consensus CCACCCAGATTCATATACTCAGATAAGCAACCCATCGACTTAGGCATAGGCGAAAACAAA
 
. : . : . : . : . : . :
JMSF024G06+ AGCACCAAATTCGAAGAAATTTTCGGGAACTCGACACTAGCCTTACCCGGGAGATTGTCG
JMFF022N14+ CCCGGGAGATTGTCG
                      ____________________________________________________________
consensus AGCACCAAATTCGAAGAAATTTTCGGGAACTCGACACTAGCCTTACCCGGGAGATTGTCG
 
. : . : . : . : . : . :
JMSF024G06+ ATTTCAGATTCCAAAGCATAATCGCAGACGAGCTGGTGCAGAGAGCTCGCGACATAAGAG
JMFF022N14+ ATTTCAGATTCCAAAGCATAATCGCAGACGAGCTGGTGCAGAGAGCTCGCGACATAAGAG
                      ____________________________________________________________
consensus ATTTCAGATTCCAAAGCATAATCGCAGACGAGCTGGTGCAGAGAGCTCGCGACATAAGAG
 
. : . : . : . : . : . :
JMSF024G06+ GCGCGAGGCGGATCTACCTCAAATTCCACCGGAATTGACAGAGATGTGAGCAAATCAGTA
JMFF022N14+ GCGCGAGGCGGATCTACCTCAAATTCCACCGGAATTGACAGAGATGTGAGCAAATCAGTA
                      ____________________________________________________________
consensus GCGCGAGGCGGATCTACCTCAAATTCCACCGGAATTGACAGAGATGTGAGCAAATCAGTA
 
. : . : . : . : . : . :
JMSF024G06+ AGGGAATTTAGGGTTTGGGAAGGGTGGCTGAAAGAGAGAGGAGCGGCGGATGCGTTACCA
JMFF022N14+ AGGGAATTTAGGGTTTGGGAAGGGTGGCTGAAAGAGAGAGGAGCGGCGGATGCGTTACCA
                      ____________________________________________________________
consensus AGGGAATTTAGGGTTTGGGAAGGGTGGCTGAAAGAGAGAGGAGCGGCGGATGCGTTACCA
 
. : . : . : . : . : . :
JMSF024G06+ GCGAGACGACCGACGGCGGAGGCGGAGAGGAGAGGGGAGAGAGAGGAGAAGAAGAATTTG
JMFF022N14+ GCGAGACGACCGACGGCGGAGGCGGAGAGGAGAGGGGAGAGAGAGGAGAAGAAGAATTTG
                      ____________________________________________________________
consensus GCGAGACGACCGACGGCGGAGGCGGAGAGGAGAGGGGAGAGAGAGGAGAAGAAGAATTTG
 
. : . : . : . : . : . :
JMSF024G06+ AAGGAGAAGAGGGATTGAGAAAGCGGAGCAAAGGTCAGGAGGCGCTTGGCGGCTGCGGAG
JMFF022N14+ AAGGAGAAGAGGGATTGAGAAAGCGGAGCAAAGGTCAGGAGGCGCTTGGCGGCTGCGGAG
                      ____________________________________________________________
consensus AAGGAGAAGAGGGATTGAGAAAGCGGAGCAAAGGTCAGGAGGCGCTTGGCGGCTGCGGAG
 
. : . : . : . : . : . :
JMSF024G06+ ACTGAAGTGAGGTAAGAGATAGGGTTGTGGAAAGCTTGTAGCGGATGAAGATCTATGAGG
JMFF022N14+ ACTGAAGTGAGGTAAGAGATAGGGTTGTGGAAAGCTTGTAGCGGATGAAGATCTATGAGG
                      ____________________________________________________________
consensus ACTGAAGTGAGGTAAGAGATAGGGTTGTGGAAAGCTTGTAGCGGATGAAGATCTATGAGG
 
. : . : . : . : . : . :
JMSF024G06+ AGGACTATGCGCTGGGTCTTCGAGTAGTCAAACGGCTCCGCCATTGCAGCGGCGGAGAGC
JMFF022N14+ AGGACTATGCGCTGGGTCTTCGAGTAGTCAAACGGCTCCGCCATTGCAGCGGCGGAGAGC
                      ____________________________________________________________
consensus AGGACTATGCGCTGGGTCTTCGAGTAGTCAAACGGCTCCGCCATTGCAGCGGCGGAGAGC
 
. : . : . : . : . : . :
JMSF024G06+ TAATTGAGCCTCGAATTCTCACGGCACCAAAAATGGCGTCGGCCGGCAGCACGCGCCTAA
JMFF022N14+ TAATTGAGCCTCGAATTCTCACGGCACCAAAAATGGCGTCGGCCGGCAGCACGCGCCTAA
                      ____________________________________________________________
consensus TAATTGAGCCTCGAATTCTCACGGCACCAAAAATGGCGTCGGCCGGCAGCACGCGCCTAA
 
. : . : . : . : . : . :
JMSF024G06+ GATTCCAGAAGGGACTGTCTCGGCGGCAAAACTGAATGAGCGGTAAAATTTTCGTTT
JMFF022N14+ GATTCCAGAAGGGACTGTCTCGGCGGCAAAACTGAATGAGCGGTAAAATTTTCGTTTTTC
                      ____________________________________________________________
consensus GATTCCAGAAGGGACTGTCTCGGCGGCAAAACTGAATGAGCGGTAAAATTTTCGTTTTTC