Contig 007353:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF005C06Sequence452007353 (6)ref|XP_004237485.1|168PREDICTED: uncharacterized protein LOC101264314 [Solanum lycopersicum]743007353 (6)ref|XP_006427901.1|9e-101hypothetical protein CICLE_v10026316mg [Citrus clementina] ref|XP_006464534.1| P
JMFF018J18Sequence564007353 (6)ref|XP_004237485.1|243PREDICTED: uncharacterized protein LOC101264314 [Solanum lycopersicum]754007353 (6)ref|XP_006427901.1|3e-116hypothetical protein CICLE_v10026316mg [Citrus clementina] ref|XP_006464534.1| P
JMSF031I01Sequence658007353 (6)ref|XP_006427901.1|1e-80hypothetical protein CICLE_v10026316mg [Citrus clementina] ref|XP_006464534.1| P613007353 (6)ref|XP_006427901.1|8e-81hypothetical protein CICLE_v10026316mg [Citrus clementina] ref|XP_006464534.1| P

Alignment

This contig is upended


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JMSF031I01+                                                      CTNTAAATCAAACCATT
                      ____________________________________________________________
consensus                                                        CTNTAAATCAAACCATT
 
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rJMSF031I01-                                      ATAGTTTGCCAGAGAATAAATTGAGACTTGAA
JMSF031I01+           ATTTTCATTTGTGTTATTGTGTTTCATAATAGTTTGCCAGAGAATAAATTGAGACTTGAA
                      ____________________________________________________________
consensus             ATTTTCATTTGTGTTATTGTGTTTCATAATAGTTTGCCAGAGAATAAATTGAGACTTGAA
 
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rJMSF031I01-          TAGTGTAAAGTGTAAACATTGACAGGAATGGATGACAAATAATAATCCTAGGAAGCCGCC
JMSF031I01+           TAGTGTAAAGTGTAAACATTGACAGGAATGGATGACAAATAATAATCCTAGGAAGCCGCC
rJMFF005C06-          TAGTGTAAAGTGTAAACATTGACAGGAATGGATGACAAATAATAATCCTAGGAAGCTGCC
rJMFF018J18-                                                             GAAGCTGCC
                      ____________________________________________________________
consensus             TAGTGTAAAGTGTAAACATTGACAGGAATGGATGACAAATAATAATCCTAGGAAGCCGCC
 
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rJMSF031I01-          AAACATCATTACTAATTACAATATGAAAATCTCTCCTTTCTTTCTCAAACTTGCATCTCT
JMSF031I01+           AAACATCATTACTAATTACAATATGAAAATCTCTCCTTTCTTTCTCAAACTTGCATCTCT
rJMFF005C06-          AAACATCATTACTAATTACAATATGAAAATCTCTCCTTTCTTTCTCAAACTTGCATCTCT
rJMFF018J18-          AAACATCATTACTAATTACAATATGAAAATCTCTCCTTTCTTTCTCAAACTTGCATCTCT
                      ____________________________________________________________
consensus             AAACATCATTACTAATTACAATATGAAAATCTCTCCTTTCTTTCTCAAACTTGCATCTCT
 
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rJMSF031I01-          TACATAGTCAACAAGTATACACCTCATAATATCGTCCCAAACACACACTCAACAATCACA
JMSF031I01+           TACATAGTCAACAAGTATACACCTCATAATATCGTCCCAAACACACACTCAACAATCACA
rJMFF005C06-          TACATAGTCAACAAGTATACACCTCATAATATCGTCCCAAACACACACTCAACAATCACA
rJMFF018J18-          TACATAGTCAACAAGTATACACCTCATAATATCGTCCCAAACACACACTCAACAATCACA
                      ____________________________________________________________
consensus             TACATAGTCAACAAGTATACACCTCATAATATCGTCCCAAACACACACTCAACAATCACA
 
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rJMSF031I01-          TTATTCTGTTAAGTGGGATTCTTTCATTAGGTCGAGCAATCCTTTCCACTGGAGAAATCA
JMSF031I01+           TTATTCTGTTAAGTGGGATTCTTTCATTAGGTCGAGCAATCCTTTCCACTGGAGAAATCA
rJMFF005C06-          TTATTCTGTTAAGTGGGATTCTTTCATTAGGTCGAGCAATCCTTTCCACTGGAGAAATCA
rJMFF018J18-          TTATTCTGTTAAGTGGGATTCTTTCATTAGGTCGAGCAATCCTTTCCACTGGAGAAATCA
                      ____________________________________________________________
consensus             TTATTCTGTTAAGTGGGATTCTTTCATTAGGTCGAGCAATCCTTTCCACTGGAGAAATCA
 
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rJMSF031I01-          CTTGCGGCATTGTCATACCACCAGAAACAATGATTTCTATGCCTTCACGGATGGACAAAT
JMSF031I01+           CTTGCGGCATTGTCATACCACCAGAAACAATGATTTCTATGCCTTCACGGATGGACAAAT
rJMFF005C06-          CTTGCGGCATTGTCATACCACCAGAAACAATGATTTCTATGCCTTCACGGATGGACAAAT
rJMFF018J18-          CTTGCGGCATTGTCATACCACCAGAAACAATGATTTCTATGCCTTCACGGATGGACAAAT
                      ____________________________________________________________
consensus             CTTGCGGCATTGTCATACCACCAGAAACAATGATTTCTATGCCTTCACGGATGGACAAAT
 
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rJMSF031I01-          TTGGCCTTATGACGTCCTTGGAGCTAACTAGGAGTATATCACCAATGTACAGATGGTTAG
JMSF031I01+           TTGGCCTTATGACGTCCTTGGAGCTAACTAGGAGTATATCACCAATGTACAGATGGTTAG
rJMFF005C06-          TTGGCCTTATGACGTCCTTGGAGCTAACTAGGAGTATATCACCAATGTACAGATGGTTAG
rJMFF018J18-          TTGGCCTTATGACGTCCTTGGAGCTAACTAGGAGTATATCACCAATGTACAGATGGTTAG
                      ____________________________________________________________
consensus             TTGGCCTTATGACGTCCTTGGAGCTAACTAGGAGTATATCACCAATGTACAGATGGTTAG
 
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rJMSF031I01-          TTGGGACAAACACACTGCACAATTCTTCATCACCATCGTCTTTCTGAAGGATGACTGAAG
JMSF031I01+           TTGGGACAAACACACTGCACAATTCTTCATCACCATCGTCTTTCTGAAGGATGACTGAAG
rJMFF005C06-          TTGGGACAAACACACTGCACAATTCTTCATCACCATCGTCTTTCTGAAGGATGACTGAAG
rJMFF018J18-          TTGGGACAAACACACTGCACAATTCTTCATCACCATCGTCTTTCTGAAGGATGACTGAAG
                      ____________________________________________________________
consensus             TTGGGACAAACACACTGCACAATTCTTCATCACCATCGTCTTTCTGAAGGATGACTGAAG
 
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rJMSF031I01-          ATGTTATGAAACCAAATGCATATTCACCCACACGTGGATGACGAATGATTGCCACTTCTT
JMSF031I01+           ATGTTATGAAACCAAATGCATATTCACCCACACGTGGATGACGAATGATTGCCACTTCTT
rJMFF005C06-          ATGTTATGAAACCAAATGCATATTCACCCACACGTGGATGACGAATGATTGCCACTTCTT
rJMFF018J18-          ATGTTATGAAACCAAATGCATATTCACCCACACGTGGATGACGAATGATTGCCACTTCTT
JMFF018J18+                                               GATGACGAATGATTGCCACTTCTT
                      ____________________________________________________________
consensus             ATGTTATGAAACCAAATGCATATTCACCCACACGTGGATGACGAATGATTGCCACTTCTT
 
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rJMSF031I01-          TAAAAGCTGTTGTATTTTGATCTGGAGATATTGCAGAACTGATTTGCTTGGAAGCTGAAT
JMSF031I01+           TAAAAGCTGTTGTATTTTGATCTGGAGATATTGCAGAACTGATTTGCTTGGAAGCTGAAT
rJMFF005C06-          TAAAAGCTGTTGTATTTTGATCTGGAGATATTGCAGAACTGATTTGCTTGGAAGCTGAAT
rJMFF018J18-          TAAAAGCTGTTGTATTTTGATCTGGAGATATTGCAGAACTGATTTGCTTGGAAGCTGAAT
JMFF018J18+           TAAAAGCTGTTGTATTTTGATCTGGAGATATTGCAGAACTGATTTGCTTGGAAGCTGAAT
                      ____________________________________________________________
consensus             TAAAAGCTGTTGTATTTTGATCTGGAGATATTGCAGAACTGATTTGCTTGGAAGCTGAAT
 
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rJMSF031I01-          ATATGTGCTTAACAAATGGCATTCGCTTTATAAGCCA                       
JMSF031I01+           ATATGTGCTTAACAAATGGCATTCGCTTTATAAGCCA                       
rJMFF005C06-          ATATGTGCTTAACAAATGGCATTCGCTTTATAAGCCATTCCCCAACCCAGAAAACAGTAG
rJMFF018J18-          ATATGTGCTTAACAAATGGCATTCGCTTTATAAGCCATTCCCCAACCCAGAAAACAGTAG
JMFF005C06+                                     TTTATAAGCCATTCCCCAACCCAGAAAACAGTAG
JMFF018J18+           ATATGTGCTTAACAAATGGCATTCGCTTTATAAGCCATTCCCCAACCCAGAAAACAGTAG
                      ____________________________________________________________
consensus             ATATGTGCTTAACAAATGGCATTCGCTTTATAAGCCATTCCCCAACCCAGAAAACAGTAG
 
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rJMFF005C06-          CACCCAGCCATGATGAAACAAATACACCAACTAAGAATACAAAAAGTAGAGACGTCACGA
rJMFF018J18-          CACCCAGCCATGATGAAACAAATACACCAACTAAGAATACAAAAAGTAGAGACGTTACGA
JMFF005C06+           CACCCAGCCATGATGAAACAAATACACCAACTAAGAATACAAAAAGTAGAGACGTCACGA
JMFF018J18+           CACCCAGCCATGATGAAACAAATACACCAACTAAGAATACAAAAAGTAGAGACGTTACGA
                      ____________________________________________________________
consensus             CACCCAGCCATGATGAAACAAATACACCAACTAAGAATACAAAAAGTAGAGACGTTACGA
 
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rJMFF005C06-          ATCCCAGTCCAAATATGTCAAAACCAAGTTGTTCGTATAGTGGACTGAAAAAACCATCAA
rJMFF018J18-          ATCCCAGTCCAAATATGTCAAAACCAAGTTGTTCGTATAGTGGACTGAAAAAACCATCAA
JMFF005C06+           ATCCCAGTCCAAATATGTCAAAACCAAGTTGTTCGTATAGTGGACTGAAAAAACCATCAA
JMFF018J18+           ATCCCAGTCCAAATATGTCAAAACCAAGTTGTTCGTATAGTGGACTGAAAAAACCATCAA
                      ____________________________________________________________
consensus             ATCCCAGTCCAAATATGTCAAAACCAAGTTGTTCGTATAGTGGACTGAAAAAACCATCAA
 
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rJMFF005C06-          CAAACTGAATGAACCACCACGTC                                     
rJMFF018J18-          CAAACTGAATGAACCACCACGTCACGAAAAATGTAACCGCAACAGGAAAGAGTACTACAC
JMFF005C06+           CAAACTGAATGAACCACCACGTCACGAAAAATGTAACCGCAACAGGAAAGAGTACTACAC
JMFF018J18+           CAAACTGAATGAACCACCACGTCACGAAAAATGTAACCGCAACAGGAAAGAGTACTACAC
                      ____________________________________________________________
consensus             CAAACTGAATGAACCACCACGTCACGAAAAATGTAACCGCAACAGGAAAGAGTACTACAC
 
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rJMFF018J18-          ATCCAGTCATGAACTTCTTTGAGAC                                   
JMFF005C06+           ATCCAGTCATGAACTTCTTTGAGACCCAGCTTTGAAGAAAGTAACAACAAGCCTTGCGGG
JMFF018J18+           ATCCAGTCATGAACTTCTTTGAGACCCAGCTTTGAAGAAAGTAACAACAAGCCTTGCGGG
                      ____________________________________________________________
consensus             ATCCAGTCATGAACTTCTTTGAGACCCAGCTTTGAAGAAAGTAACAACAAGCCTTGCGGG
 
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JMFF005C06+           TAGAAGAATTGGATGAAGGCGGAGAAGATTTGAGTGGGTCTTCGGGATTGTCGGCGACGG
JMFF018J18+           TAGAAGAATTGGATGAAGGCGGAGAAGATTTGAGTGGGTCTTCGGGATCGTCGGCGACGG
                      ____________________________________________________________
consensus             TAGAAGAATTGGATGAAGGCGGAGAAGATTTGAGTGGGTCTTCGGGATTGTCGGCGACGG
 
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JMFF005C06+           CTTGACTGAGCGGGACTGAGGTGGCATCCTTCTCTTCCGCCATTACTTTGACTTCGCAGA
JMFF018J18+           CTTGACTGAGCGGGACTGAGGTGGCATCCTTCTCTTCCGCCATTACTTTGACTTCGCAGA
                      ____________________________________________________________
consensus             CTTGACTGAGCGGGACTGAGGTGGCATCCTTCTCTTCCGCCATTACTTTGACTTCGCAGA
 
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JMFF005C06+           TCTCAGCTGGGAAAATGACGAGACGAGACGAGACTTGTCTGGAGTAGAAAGAGTGATC  
JMFF018J18+           TCTCAGCTGGGAAAATGACGAGACGAGACGAGACTTGTCTGGAGTAGAAAGAGTGATCGT
                      ____________________________________________________________
consensus             TCTCAGCTGGGAAAATGACGAGACGAGACGAGACTTGTCTGGAGTAGAAAGAGTGATCGT