Contig 007344:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF001D01Sequence576007344 (4)ref|XP_010100638.1|5e-04hypothetical protein L484_002738 [Morus notabilis] gb|EXB83503.1| hypothetical p686006919 (4)ref|XP_008242571.1|3e-52PREDICTED: transcription factor bHLH68 [Prunus mume]
JMFF013P08Sequence573007344 (4)693006919 (4)ref|XP_008242571.1|2e-61PREDICTED: transcription factor bHLH68 [Prunus mume]
JMFF016A24Sequence570007344 (4)771015913ref|XP_008242571.1|1e-73PREDICTED: transcription factor bHLH68 [Prunus mume]
JMSF001F13Sequence400007344 (4)543006919 (4)ref|XP_006451210.1|2e-20hypothetical protein CICLE_v10008684mg [Citrus clementina] gb|ESR64450.1| hypoth

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF013P08+ CCAAGAGAAGCTGGCTCCATGACTCTGGAA
JMFF001D01+ ACCCTCCCAAGAGAAGCTGGCTCCATGACTCTGGAA
JMFF016A24+ CCAAGAGAAGCTGGCTCCATGACTCTGGAA
                      ____________________________________________________________
consensus ACCCTCCCAAGAGAAGCTGGCTCCATGACTCTGGAA
 
. : . : . : . : . : . :
JMFF013P08+ GCTGGTGTTCATGGTGGTTGTTATCGGTCCACGAGGAGGCGGATAAGGGCGGGAGGGAAG
JMFF001D01+ GCTGGTGTTCATGGTGGTTGTTATCGGTCCACGAGGAGGCGGATAAGGGCGGGAGGGAAG
JMSF001F13+ TCCACGAGGAGGCGGATAAGGGCGGGAGGGAAG
JMFF016A24+ GCTGGTGTTCATGGTGGTTGTTATCGGTCCACGAGGAGGCGGATAAGGGCGGGAGGGAAG
                      ____________________________________________________________
consensus GCTGGTGTTCATGGTGGTTGTTATCGGTCCACGAGGAGGCGGATAAGGGCGGGAGGGAAG
 
. : . : . : . : . : . :
JMFF013P08+ GGGTGGCGGTGGGCGGTGGCGGGGAAGGGAAGAGAGTGGGGAGAGGAGCCAAGAAAGGAG
JMFF001D01+ GGGTGGCGGTGGGCGGTGGCGGGGAAGGGAAGAGAGTGGGGAGAGGAGCCAAGAAAGGAG
JMSF001F13+ GGGTGGCGGTGGGCGGTGGCGGGGAAGGGAAGAGAGTGGGGAGAGGAGCCAAGAAAGGAG
JMFF016A24+ GGGTGGCGGTGGGCGGTGGCGGGGAAGGGAAGAGAGTGGGGAGAGGAGCCAAGAAAGGAG
                      ____________________________________________________________
consensus GGGTGGCGGTGGGCGGTGGCGGGGAAGGGAAGAGAGTGGGGAGAGGAGCCAAGAAAGGAG
 
. : . : . : . : . : . :
JMFF013P08+ GAGGAGGCGGCGGTTGGTGGTGGTGGTGGTGGAGTTGATGATGGGGTAAAGGAGGCCTCA
JMFF001D01+ GAGGAGGCGGCGGTTGGTGGTGGTGGTGGTGGAGTTGATGATGGGGTAAAGGAGGCCTCA
JMSF001F13+ GAGGAGGCGGCGGTTGGTGGTGGTGGTGGTGGAGTTGATGATGGGGTAAAGGAGGCCTCA
JMFF016A24+ GAGGAGGCGGCGGTTGGTGGTGGTGGTGGTGGAGTTGATGATGGGGTAAAGGAGGCCTCA
                      ____________________________________________________________
consensus GAGGAGGCGGCGGTTGGTGGTGGTGGTGGTGGAGTTGATGATGGGGTAAAGGAGGCCTCA
 
. : . : . : . : . : . :
JMFF013P08+ TGGTATTATTGATGATGCTCCACCAGTTAGGGCTTCCACCACCCATCATTTGCTGTACTG
JMFF001D01+ TGGTATTATTGATGATGCTCCACCAGTTAGGGCTTCCACCACCCATCATTTGCTGTACTG
JMSF001F13+ TGGTATTATTGATGATGCTCCACCAGTTAGGGCTTCCACCACCCATCATTTGCTGTACTG
JMFF016A24+ TGGTATTATTGATGATGCTCCACCAGTTAGGGCTTCCACCACCCATCATTTGCTGTACTG
                      ____________________________________________________________
consensus TGGTATTATTGATGATGCTCCACCAGTTAGGGCTTCCACCACCCATCATTTGCTGTACTG
 
. : . : . : . : . : . :
JMFF013P08+ GTAGTGATGAACTCTGCAAAACACCTCTATTCATCTGATCTCTTCTCTCAATTCAATTAT
JMFF001D01+ GTAGTGATGAACTCTGCAAAACACCTCTATTCATCTGATCTCTTCTCTCAATTCAATTAT
JMSF001F13+ GTAGTGATGAACTCTGCAAAACACCTCTATTCATCTGATCTCTTCTCTCAATTCAATTAT
JMFF016A24+ GTAGTGATGAACTCTGCAAAACACCTCTATTCATCTGATCTCTTCTCTCAATTCAATTAT
                      ____________________________________________________________
consensus GTAGTGATGAACTCTGCAAAACACCTCTATTCATCTGATCTCTTCTCTCAATTCAATTAT
 
. : . : . : . : . : . :
JMFF013P08+ CTTCTCTTTCACTTTCACTTTCACCTTCTTGATCACCTTCTAGCTAGCTCCAGCCTTCTT
JMFF001D01+ CTTCTCTTTCACTTTCACTTTCACCTTCTTGATCACCTTCTAGCTAGCTCCAGCCTTCTT
JMSF001F13+ CTTCTCTTTCACTTTCACTTTCACCTTCTTGATCACCTTCTAGCTAGCTCCAGCCTTCTT
JMFF016A24+ CTTCTCTTTCACTTTCACTTTCACCTTCTTGATCACCTTCTAGCTAGCTCCAGCCTTCTT
                      ____________________________________________________________
consensus CTTCTCTTTCACTTTCACTTTCACCTTCTTGATCACCTTCTAGCTAGCTCCAGCCTTCTT
 
. : . : . : . : . : . :
JMFF013P08+ CTTCTCTCTAACTTTATACAATTTTCTTGAATCTATCTCTCCCAAACAAACAAGGCCTTA
JMFF001D01+ CTTCTCTCTAACTTTATACAATTTTCTTGAATCTATCTCTCCCAAACAAACAAGGCCTTA
JMSF001F13+ CTTCTCTCTAACTTTATACAATTTTCTTGAATCTATCTCTCCCAAACAAACAAGGCCTTA
JMFF016A24+ CTTCTCTCTAACTTTATACAATTTTCTTGAATCTATCTCTCCCAAACAAACAAGGCCTTA
                      ____________________________________________________________
consensus CTTCTCTCTAACTTTATACAATTTTCTTGAATCTATCTCTCCCAAACAAACAAGGCCTTA
 
. : . : . : . : . : . :
JMFF013P08+ TTAGCTTGTTCTTTTAGGAACTTTGGGGGGTCTTCCCACTCTTGATTAAGTAGAAGAATG
JMFF001D01+ TTAGCTTGTTCTTTTAGGAACTTTGGGGGGTCTTCCCACTCTTGATTAAGTAGAAGAATG
JMSF001F13+ TTAGCT
JMFF016A24+ TTAGCTTGTTCTTTTAGGAACTTTGGGGGGTCTTCCCACTCTTGATTAAGTAGAAGAATG
                      ____________________________________________________________
consensus TTAGCTTGTTCTTTTAGGAACTTTGGGGGGTCTTCCCACTCTTGATTAAGTAGAAGAATG
 
. : . : . : . : . : . :
JMFF013P08+ ATTGAAAGAAGTTTACATAAGTCTATCTATAGAGAGAGAGAGAAAGAGAGAGAGAGAGTT
JMFF001D01+ ATTGAAAGAAGTTTACATAAGTCTATCTATAGAGAGAGAGAGAAAGAGAGAGAGAGAGTT
JMFF016A24+ ATTGAAAGAAGTTTACATAAGTCTATCTATAGAGAGAGAGAGAAAGAGAGAGAGAGAGTT
                      ____________________________________________________________
consensus ATTGAAAGAAGTTTACATAAGTCTATCTATAGAGAGAGAGAGAAAGAGAGAGAGAGAGTT