Contig 007341:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF005M19Sequence455007341 (3)ref|XP_004246416.1|107PREDICTED: uncharacterized protein LOC101251023 [Solanum lycopersicum]707001034 (3)ref|XP_009595157.1|1e-80PREDICTED: uncharacterized protein LOC104091505 isoform X1 [Nicotiana tomentosi
JMFF015E11Sequence591007341 (3)ref|XP_004246416.1|164PREDICTED: uncharacterized protein LOC101251023 [Solanum lycopersicum]710001034 (3)ref|XP_009595157.1|1e-80PREDICTED: uncharacterized protein LOC104091505 isoform X1 [Nicotiana tomentosi
JMFF035K02Sequence541007341 (3)ref|XP_004246416.1|150PREDICTED: uncharacterized protein LOC101251023 [Solanum lycopersicum]713001034 (3)ref|XP_009595157.1|2e-80PREDICTED: uncharacterized protein LOC104091505 isoform X1 [Nicotiana tomentosi

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF015E11+                   GTCGCAAGCATACATTCACAATTACTGACGAAGCATCATCTTGACCCAGTTC
                      ____________________________________________________________
consensus                     GTCGCAAGCATACATTCACAATTACTGACGAAGCATCATCTTGACCCAGTTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF035K02+           TAAATGAAGTCCAACAAGTGCCTCCGAGGCAGCAACTCTAACAATTGTTGAAGACGAGCT
JMFF015E11+           TAAATGAAGTCCAACAAGTGCCTCCGAGGCAGCAACTCTAACAATTGTTGAAGACGAGCT
                      ____________________________________________________________
consensus             TAAATGAAGTCCAACAAGTGCCTCCGAGGCAGCAACTCTAACAATTGTTGAAGACGAGCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF035K02+           TAATTGTTGAATTTTCTGAAGTTTCTCAATTGCTTCTTCATAATT-CCCACTATTATATA
JMFF005M19+                                    TCAATTGCTTCTTCATAATTCCCCACTATTATATA
JMFF015E11+           TAATTGTTGAATTTTCTGAAGTTTCTCAATTGCTTCTTCATAATT-CCCACTATTATATA
                      ____________________________________________________________
consensus             TAATTGTTGAATTTTCTGAAGTTTCTCAATTGCTTCTTCATAATT-CCCACTATTATATA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF035K02+           ATAATGTAGACATCGCGAGTAAAACCATCCCTCTAGCATTCTCATCGGAGTTAGTAGAGT
JMFF005M19+           ATAATGTAGACATCGCGAGTAAAACCATCCCTCTAGCATTCTCATCGGAGTTAGTAGAGT
JMFF015E11+           ATAATGTAGACATCGCGAGTAAAACCATCCCTCTAGCATTCTCATCGGAGTTAGTAGAGT
                      ____________________________________________________________
consensus             ATAATGTAGACATCGCGAGTAAAACCATCCCTCTAGCATTCTCATCGGAGTTAGTAGAGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF035K02+           AGCACTGCTCCAACACCAACTGAGCTTGAGCATACGCATCATCTGATTTTTTAGAACGGG
JMFF005M19+           AGCACTGCTCCAACACCAACTGAGCTTGAGCATACGCATCATCTGATTTTTTAGAACGGG
JMFF015E11+           AGCACTGCTCCAACACCAACTGAGCTTGAGCATACGCATCATCTGATTTTTTAGAACGGG
                      ____________________________________________________________
consensus             AGCACTGCTCCAACACCAACTGAGCTTGAGCATACGCATCATCTGATTTTTTAGAACGGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF035K02+           CGAGAGAGAGAGCGTAATTTGTCATCTCAAGAGCAACAGGGTTAACCTTGAAAGATCTGT
JMFF005M19+           CGAGAGAGAGAGCGTAATTTGTCATCTCAAGAGCAACAGGGTTAACCTTGAAAGATCTGT
JMFF015E11+           CGAGAGAGAGAGCGTAATTTGTCATCTCAAGAGCAACAGGGTTAACCTTGAAAGATCTGT
                      ____________________________________________________________
consensus             CGAGAGAGAGAGCGTAATTTGTCATCTCAAGAGCAACAGGGTTAACCTTGAAAGATCTGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF035K02+           CTAGGTCGGTTTTATCCGAGAAAACTCTACGCGGCGGTGGCGCCGCTACTGCTGGTGGCC
JMFF005M19+           CTAGGTCGGTTTTATCCGAGAAAACTCTACGCGGCGGTGGCGCCGCTACTGCTGGTGGCC
JMFF015E11+           CTAGGTCGGTTTTATCCGAGAAAACTCTACGCGGCGGTGGCGCCGCTACTGCTGGTGGCC
                      ____________________________________________________________
consensus             CTAGGTCGGTTTTATCCGAGAAAACTCTACGCGGCGGTGGCGCCGCTACTGCTGGTGGCC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF035K02+           GGAGAAGAGCGAATGCAGAGCCAAGCCTTCTGGCTCTGCAGAGCTTATCTCCGATTCTAA
JMFF005M19+           GGAGAAGAGCGAATGCAGAGCCAAGCCTTCTGGCTCTGCAGAGCTTATCTCCGATTCTAA
JMFF015E11+           GGAGAAGAGCGAATGCAGAGCCAAGCCTTCTGGCTCTGCAGAGCTTATCTCCGATTCTAA
                      ____________________________________________________________
consensus             GGAGAAGAGCGAATGCAGAGCCAAGCCTTCTGGCTCTGCAGAGCTTATCTCCGATTCTAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF035K02+           TCATGGAGCTGGTGGTGGTTATTTCTCCGTCTTCCCCCTCTGCTGATCACTGCAGGGAAA
JMFF005M19+           TCATGGAGCTGGTGGTGGTTATTTCTCCGTCTTCCCCCTCTGCTGATCACTGCAGGGAAA
JMFF015E11+           TCATGGAGCTGGTGGTGGTTATTTCTCCGTCTTCCCCCTCTGCTGATCACTGCAGGGAAA
                      ____________________________________________________________
consensus             TCATGGAGCTGGTGGTGGTTATTTCTCCGTCTTCCCCCTCTGCTGATCACTGCAGGGAAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF035K02+           ACAAAAACCCTAAATTGCAATCAAAGGGTTTATCAAAATTTCCACCTATTTTTCCTACAT
JMFF005M19+           ACAAAAACCCTAAATTGCAATCAAAGGGTTTATCAAAATTTCCACCTATTTTTCCTACAT
JMFF015E11+           ACAAAAACCCTAAATTGCAATCAAAGGGTTTATCAAAATTTCCACCTATTTTTCCTACAT
                      ____________________________________________________________
consensus             ACAAAAACCCTAAATTGCAATCAAAGGGTTTATCAAAATTTCCACCTATTTTTCCTACAT