Contig 007326:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF005A23Sequence446007326 (19)dbj|BAO57279.1|9e-76alpha-expansin [Ipomoea nil]646007326 (19)dbj|BAO57279.1|3e-149alpha-expansin [Ipomoea nil]
JMFF013B16Sequence454007326 (19)dbj|BAO57279.1|1e-77alpha-expansin [Ipomoea nil]
JMFF023C17Sequence447007326 (19)dbj|BAO57279.1|5e-75alpha-expansin [Ipomoea nil]725007326 (19)dbj|BAO57279.1|4e-175alpha-expansin [Ipomoea nil]
JMFF023L14Sequence442007326 (19)dbj|BAO57279.1|7e-75alpha-expansin [Ipomoea nil]679007326 (19)dbj|BAO57279.1|2e-162alpha-expansin [Ipomoea nil]
JMFF040G17Sequence450007326 (19)dbj|BAO57279.1|6e-76alpha-expansin [Ipomoea nil]723007326 (19)dbj|BAO57279.1|2e-175alpha-expansin [Ipomoea nil]
JMFF048L23Sequence433007326 (19)dbj|BAO57279.1|2e-71alpha-expansin [Ipomoea nil]259007326 (19)dbj|BAO57279.1|1e-48alpha-expansin [Ipomoea nil]
JMFN004O15Sequence571007326 (19)dbj|BAO57279.1|6e-118alpha-expansin [Ipomoea nil]
JMFN013A04Sequence609007326 (19)dbj|BAO57279.1|4e-127alpha-expansin [Ipomoea nil]
JMFN040K13Sequence534007326 (19)dbj|BAO57279.1|3e-14alpha-expansin [Ipomoea nil]
JMSF030A12Sequence656007326 (19)dbj|BAO57279.1|5e-124alpha-expansin [Ipomoea nil]229007326 (19)
JMSF030A24Sequence700007326 (19)dbj|BAO57279.1|2e-162alpha-expansin [Ipomoea nil]
JMSF047G24Sequence654007326 (19)dbj|BAO57279.1|1e-131alpha-expansin [Ipomoea nil]699007326 (19)dbj|BAO57279.1|6e-159alpha-expansin [Ipomoea nil]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF030A12- AACAGTAAAGAGAGCTG
JMFN040K13+ ATAATAATTGGTGTAAACAGTAAAGAGAGCTG
                      ____________________________________________________________
consensus ATAATAATTGGTGTAAACAGTAAAGAGAGCTG
 
. : . : . : . : . : . :
rJMSF030A12- CGGGCTACATTGCATTACTATTTTGCTATCCCTGCAGCCGCCTCAGCCTCCACGGCTCAC
JMFN040K13+ CGGGCTACATTGCATTACTATTTTGCTATCCCTGCAGCCGCCTCAGCCTCCACGGCTCAC
                      ____________________________________________________________
consensus CGGGCTACATTGCATTACTATTTTGCTATCCCTGCAGCCGCCTCAGCCTCCACGGCTCAC
 
. : . : . : . : . : . :
rJMSF030A12- CACACTTTTTCACCGTCGCCGGCTTTTCTTAACATTTCGCCGGCGACCACTTACAGACAC
JMFN040K13+ CACACTTTTTCACCGTCGCCGGCTTTTCTTAACATTTCGCCGGCGACCACTTACAGACCC
                      ____________________________________________________________
consensus CACACTTTTTCACCGTCGCCGGCTTTTCTTAACATTTCGCCGGCGACCACTTACAGACCC
 
. : . : . : . : . : . :
rJMSF030A12- CATAAAACAGAGCAAACCCAATCCCATGGGCTAATTAATTAAAGTAAGCAAACACTGAAG
JMFN040K13+ CATAAAACAGAGCAAACCCAATCCCATGGGCTAATTAATTAAAGTAAGCAAACACTGAAG
                      ____________________________________________________________
consensus CATAAAACAGAGCAAACCCAATCCCATGGGCTAATTAATTAAAGTAAGCAAACACTGAAG
 
. : . : . : . : . : . :
rJMSF030A12- AACCCAAAAAAAAAAAAA
JMFN040K13+ AACCCAAAAAAAAAAAAAAGTAACAAAGCATATTACTTTTTCTATCCTATTATCTAATTT
                      ____________________________________________________________
consensus AACCCAAAAAAAAAAAAAAGTAACAAAGCATATTACTTTTTCTATCCTATTATCTAATTT
 
. : . : . : . : . : . :
JMFN040K13+ CCCAGACTTCAAATTTTTCCCGGGAAAGAGTAAACTTATATAAATGCATGATGACAAACA
                      ____________________________________________________________
consensus CCCAGACTTCAAATTTTTCCCGGGAAAGAGTAAACTTATATAAATGCATGATGACAAACA
 
. : . : . : . : . : . :
JMFN040K13+ AAAATATTGTGTGGAGTTTTGAGGTGAGGAATTCTTCAGGGGTCAGTTTAGTATTTTTGG
                      ____________________________________________________________
consensus AAAATATTGTGTGGAGTTTTGAGGTGAGGAATTCTTCAGGGGTCAGTTTAGTATTTTTGG
 
. : . : . : . : . : . :
JMFN040K13+ TTTTTTTTTTTTTTTGGTTTGGGGGTGCCTAGGCTCGGAAATTCTTGCCCTGGAAGGTTT
rJMFF023C17- TCGGAAATTCTTGCCCTGGAAGGTTT
rJMFF023L14- AATTCTTGCCCTGGAAGGTTT
rJMFF005A23- AATTCTTGCCCTGGAAGGTTT
rJMFF048L23- AATTCTTGCCCTGGAAGGTTT
rJMFF040G17- TCGGAAATTCTTGCCCTGGAAGGTTT
                      ____________________________________________________________
consensus TTTTTTTTTTTTTTTGGTTTGGGGGTGCCTAGGCTCGGAAATTCTTGCCCTGGAAGGTTT
 
. : . : . : . : . : . :
JMFN040K13+ GTCCGAACTGCCAATTGGCGGGCGCCACGTTCCACGAGGTGACTTGGCGACGGTCGCTGG
rJMFF023C17- GTCCGAACTGCCAATTGGCGGGCGCCACGTTCCACGAGGTGACTTGGCGACGGTCGCTGG
rJMFF023L14- GTCCGAACTGCCAATTGGCGGGTGCCACGTTCCACGAGGTGACTTGGCGACGGTCGCTGG
rJMFF005A23- GTCCGAACTGCCAATTGGCGGGTGCCACGTTCCACGAGGTGACTTGGCGACGGTCGCTGG
rJMFF048L23- GTCCGAACTGCCAATTGGCGGGCGCCACGTTCCACGAGGTGACTTGGCGACGGTCGCTGG
rJMFF040G17- GTCCGAACTGCCAATTGGCGGGCGCCACGTTCCACGAGGTGACTTGGCGACGGTCGCTGG
rJMSF030A24- TCCGAACTGCCAATTGGCGGGCGCCACGTTCCACGAGGTGACTTGGCGACGGTCGCTGG
rJMSF047G24- ATTGGCGGGCGCCACGTTCCACGAGGTGACTTGGCGACGGTCGCTGG
                      ____________________________________________________________
consensus GTCCGAACTGCCAATTGGCGGGCGCCACGTTCCACGAGGTGACTTGGCGACGGTCGCTGG
 
. : . : . : . : . : . :
JMFN040K13+ CTCGGACCCTGAAGGAGAGGGA
rJMFF023C17- CTCGGACCCTGAAGGAGAGGGACTGGCCCACAAGGAAGGCGCTGGTTTCCCAATTTTGCC
rJMFF023L14- CTCGGACCCTGAAGGAGAGGGACTGGCCCACAAGGAAGGCGCTGGTTTCCCAATTTTGCC
rJMFF005A23- CTCGGACCCTGAAGGAGAGGGACTGGCCCACAAGGAAGGCGCTGGTTTCCCAATTTTGCC
rJMFF048L23- CTCGGACCCTGAAGGAGAGGGACTGGCCCACAAGGAAGGCGCTGGTTTCCCAATTTTGCC
rJMFF040G17- CTCGGACCCTGAAGGAGAGGGACTGGCCCACAAGGAAGGCGCTGGTTTCCCAATTTTGCC
rJMSF030A24- CTCGGACCCTGAAGGAGAGGGACTGGCCCACAAGGAAGGCGCTGGTTTCCCAATTTTGCC
rJMSF047G24- CTCGGACCCTGAAGGAGAGGGACTGGCCCACAAGGAAGGCGCTGGTTTCCCAATTTTGCC
                      ____________________________________________________________
consensus CTCGGACCCTGAAGGAGAGGGACTGGCCCACAAGGAAGGCGCTGGTTTCCCAATTTTGCC
 
. : . : . : . : . : . :
rJMFF023C17- CCCAATTCCTGGACAAAGTGATCCATGGGGTTCTGGATCCCTTAACCAAGACCTTCTGGA
rJMFF023L14- CCCAATTCCTGGACAAAGTGATCCATGGGGTTCTGGATCCCTTAACCAAGACCTTCTGGA
rJMFF005A23- CCCAATTCCTGGACAAAGTGATCCATGGGGTTCTGGATCCCTTAACCAAGACCTTCTGGA
rJMFF048L23- CCCAATTCCTGGACAAAGTGATCCATGGGGTTCTGGATCCCTTAACCAAGACCTTCTGGA
rJMFF040G17- CCCAATTCCTGGACAAAGTGATCCATGGGGTTCTGGATCCCTTAACCAAGACCTTCTGGA
rJMSF030A24- CCCAATTCCTGGACAAAGTGATCCATGGGGTTCTGGATCCCTTAACCAAGACCTTCTGGA
rJMSF047G24- CCCAATTCCTGGACAAAGTGATCCATGGGGTTCTGGATCCCTTAACCAAGACCTTCTGGA
JMSF030A12+ A
                      ____________________________________________________________
consensus CCCAATTCCTGGACAAAGTGATCCATGGGGTTCTGGATCCCTTAACCAAGACCTTCTGGA
 
. : . : . : . : . : . :
rJMFF023C17- TATCACCCGCACCCGCCACGTTGGTCACTAACACCAAATTAAAGTAACGGAAACCGTTAA
rJMFF023L14- TATCACCCGCACCCGCCACGTTGGTCACTAACACCAAATTAAAGTAACGGAAACCGTTAA
rJMFF005A23- TATCACCCGCACCCGCCACGTTGGTCACTAACACCAAATTAAAGTAACGGAAACCGTTAA
rJMFF048L23- TATCACCCGCACCCGCCACGTTGGTCACTAACAC
rJMFF040G17- TATCACCCGCACCCGCCACGTTGGTCACTAACACCAAATTAAAGTAACGGAAACCGTTAA
rJMSF030A24- TATCACCCGCACCCGCCACGTTGGTCACTAACACCAAATTAAAGTAACGGAAACCGTTAA
rJMSF047G24- TATCACCCGCACCCGCCACGTTGGTCACTAACACCAAATTAAAGTAACGGAAACCGTTAA
JMSF030A12+ TATCACCCGCACCCGCCACGTTGGTCACTAACACCAAATTAAAGTAACGGAAACCGTTAA
JMFN004O15+ AA
JMFN013A04+ TGGTCACTAACACCAAATTAAAGTAACGGAAACCGTTAA
JMSF047G24+ ATCACCCGCACCCGCCACGTTGGTCACTAACACCAAATTAAAGTAACGGAAACCGTTAA
                      ____________________________________________________________
consensus TATCACCCGCACCCGCCACGTTGGTCACTAACACCAAATTAAAGTAACGGAAACCGTTAA
 
. : . : . : . : . : . :
rJMFF023C17- CGGTGAACCTAATCCCACCTTGCTTTCTGCATGGAATCCGGCGGAAATTAACCGGGACGA
rJMFF023L14- CGGTGAACCTAATCCCACCTTGCTTTCTGCATGGAATCCGGCGGAAATTAACCGGGACGA
rJMFF005A23- CGGTGAACCTAATCCCACCTTGCTTTCTGCATGGAATCCGGCGGAAATTAACCGGGACGA
rJMFF040G17- CGGTGAACCTAATCCCACCTTGCTTTCTGCATGGAATCCGGCGGAAATTAACCGGGACGA
rJMSF030A24- CGGTGAACCTAATCCCACCTTGCTTTCTGCATGGAATCCGGCGGAAATTAACCGGGACGA
rJMSF047G24- CGGTGAACCTAATCCCACCTTGCTTTCTGCATGGAATCCGGCGGAAATTAACCGGGACGA
JMSF030A12+ CGGTGAACCTAATCCCACCTTGCTTTCTGCATGGAATCCGGCGGAAATTAACCGGGACGA
JMFN004O15+ CGGTGAACCTAATCCCACCTTGCTTTCTGCATGGAATCCGGCGGAAATTAACCGGGACGA
JMFN013A04+ CGGTGAACCTAATCCCACCTTGCTTTCTGCATGGAATCCGGCGGAAATTAACCGGGACGA
JMSF047G24+ CGGTGAACCTAATCCCACCTTGCTTTCTGCATGGAATCCGGCGGAAATTAACCGGGACGA
                      ____________________________________________________________
consensus CGGTGAACCTAATCCCACCTTGCTTTCTGCATGGAATCCGGCGGAAATTAACCGGGACGA
 
. : . : . : . : . : . :
rJMFF023C17- TCCCGGCACGGTAGGCGGCGATCTTGAGGAACATGGGCATTGCGAGGTCGAAGTGGGGGC
rJMFF023L14- TCCCGGCACGGTAGGCGGCGATCTTGAGGAACATGGGCATTGCGAGGTCGAAGTGGGGGC
rJMFF005A23- TCCCGGCACGGTAGGCGGCGATCTTGAGGAACATGGGCATTGCGAGGTCGAAGTGGGGGC
rJMFF040G17- TCCCGGCACGGTAGGCGGCGATCTTGAGGAACATGGGCATTGCGAGGTCGAAGTGGGGGC
rJMSF030A24- TCCCGGCACGGTAGGCGGCGATCTTGAGGAACATGGGCATTGCGAGGTCGAAGTGGGGGC
rJMSF047G24- TCCCGGCACGGTAGGCGGCGATCTTGAGGAACATGGGCATTGCGAGGTCGAAGTGGGGGC
JMSF030A12+ TCCCGGCACGGTAGGCGGCGATCTTGAGGAACATGGGCATTGCGAGGTCGAAGTGGGGGC
JMFN004O15+ TCCCGGCACGGTAGGCGGCGATCTTGAGGAACATGGGCATTGCGAGGTCGAAGTGGGGGC
JMFN013A04+ TCCCGGCACGGTAGGCGGCGATCTTGAGGAACATGGGCATTGCGAGGTCGAAGTGGGGGC
JMSF047G24+ TCCCGGCACGGTAGGCGGCGATCTTGAGGAACATGGGCATTGCGAGGTCGAAGTGGGGGC
                      ____________________________________________________________
consensus TCCCGGCACGGTAGGCGGCGATCTTGAGGAACATGGGCATTGCGAGGTCGAAGTGGGGGC
 
. : . : . : . : . : . :
rJMFF023C17- GAGGGGGGTTGCACCACCCA-CCATTGTCGTTGGGAAGGGCGAAATTTGGCGGGCAGAAG
rJMFF023L14- GAGGGGGGTTGCACCACCCA-CCATTGTCGTTGGGAAGGGCGAAATTTGGCGGGCAGAAG
rJMFF005A23- GAGGGGGGTTGCACCACCCA-CCATTGTCGTTGGGAAGGGCGAAATTTGGCGGGCAGAAG
rJMFF040G17- GAGGGGGGTTGCACCACCCA-CCATTGTCGTTGGGAAGGGCGAAATTTGGCGGGCAGAAG
rJMSF030A24- GAGGGGGGTTGCACCACCCA-CCATTGTCGTTGGGAAGGGCGAAATTTGGCGGGCAGAAG
rJMSF047G24- GAGGGGGGTTGCACCACCCA-CCATTGTCGTTGGGAAGGGCGAAATTTGGCGGGCAGAAG
JMSF030A12+ GAGGGGGGTTGCACCACCCACCCATTGTCGTTGGGAAGGGCGAAATTTGG-GGGCAGAAG
JMFN004O15+ GAGGGGGGTTGCACCACCCA-CCATTGTCGTTGGGAAGGGCGAAATTTGGCGGGCAGAAG
JMFN013A04+ GAGGGGGGTTGCACCACCCA-CCATTGTCGTTGGGAAGGGCGAAATTTGGCGGGCAGAAG
JMFF005A23+ TGGGAAGGGCGAAATTTGGCGGGCAGAAG
JMFF023L14+ GGAAGGGCGAAATTTGGCGGGCAGAAG
JMFF023C17+ GGAAGGGCGAAATTTGGCGGGCAGAAG
JMFF040G17+ TTGGGAAGGGCGAAATTTGGCGGGCAGAAG
JMFF048L23+ GAAATTTGGCGGGCAGAAG
JMSF047G24+ GAGGGGGGTTGCACCACCCA-CCATTGTCGTTGGGAAGGGCGAAATTTGGCGGGCAGAAG
JMFF013B16+ TGTCGTTGGGAAGGGCGAAATTTGGCGGGCAGAAG
                      ____________________________________________________________
consensus GAGGGGGGTTGCACCACCCA-CCATTGTCGTTGGGAAGGGCGAAATTTGGCGGGCAGAAG
 
. : . : . : . : . : . :
rJMFF023C17- TTTGTAGCGGTGACGAAGATGGAAGGGTTTCCCGGGCTGCACGATCTGTCGTTGCTGCAC
rJMFF023L14- TTTGTAGCGGTGACGAAGATGGAAGGGTTTCCCGGGCTGCACGATCTGTCGTTGCTGCAC
rJMFF005A23- TTTGTAGCGGTGACGAAGATGGAAGGGTTTCCCGGGCTGCACGATCTGTCGTTGCTGCAC
rJMFF040G17- TTTGTAGCGGTGACGAAGATGGAAGGGTTTCCCGGGCTGCACGATCTGTCGTTGCTGCAC
rJMSF030A24- TTTGTAGCGGTGACGAAGATGGAAGGGTTTCCCGGGCTGCACGATCTGTCGTTGCTGCAC
rJMSF047G24- TTTGTAGCGGTGACGAAGATGGAAGGGTTTCCCGGGCTGCACGATCTGTCGTTGCTGCAC
JMSF030A12+ TTTGTAGCGGTGACGAAGATGGAAGGGTTTCCCGGGCTGCACGATCTGTCGTTGCTGCAC
JMFN004O15+ TTTGTAGCGGTGACGAAGATGGAAGGGTTTCCCGGGCTGCACGATCTGTCGTTGCTGCAC
JMFN013A04+ TTTGTAGCGGTGACGAAGATGGAAGGGTTTCCCGGGCTGCACGATCTGTCGTTGCTGCAC
JMFF005A23+ TTTGTAGCGGTGACGAAGATGGAAGGGTTTCCCGGGCTGCACGATCTGTCGTTGCTGCAC
JMFF023L14+ TTTGTAGCGGTGACGAAGATGGAAGGGTTTCCCGGGCTGCACGATCTGTCGTTGCTGCAC
JMFF023C17+ TTTGTAGCGGTGACGAAGATGGAAGGGTTTCCCGGGCTGCACGATCTGTCGTTGCTGCAC
JMFF040G17+ TTTGTAGCGGTGACGAAGATGGAAGGGTTTCCCGGGCTGCACGATCTGTCGTTGCTGCAC
JMFF048L23+ TTTGTAGCGGTGACGAAGATGGAAGGGTTTCCCGGGCTGCACGATCTGTCGTTGCTGCAC
JMSF047G24+ TTTGTAGCGGTGACGAAGATGGAAGGGTTTCCCGGGCTGCACGATCTGTCGTTGCTGCAC
JMFF013B16+ TTTGTAGCGGTGACGAAGATGGAAGGGTTTCCCGGGCTGCACGATCTGTCGTTGCTGCAC
                      ____________________________________________________________
consensus TTTGTAGCGGTGACGAAGATGGAAGGGTTTCCCGGGCTGCACGATCTGTCGTTGCTGCAC
 
. : . : . : . : . : . :
rJMFF023C17- TTGATCTCAAAGCAGGCTCCGCAGCTCAGCCCATTGTTGAACAGCGCAGTGCTCAGTGCG
rJMFF023L14- TTGATCTCAAAGCAGGCTCCGCAGCTCAGCCCATTGTTGAACAGCGCAGTGCTCAGTGCG
rJMFF005A23- TTGATCTCAAAGCAGGCTCCGCAGCTCAGCCCATTGTTGAACAGCGCAGTGCTCAGTGCG
rJMFF040G17- TTGATCTCAAAGCAGGCTCCGCAGCTCAGCCCATTGTTGAACAGCGCAGTGCTCAGTGCG
rJMSF030A24- TTGATCTCAAAGCAGGCTCCGCAGCTCAGCCCATTGTTGAACAGCGCAGTGCTCAGTGCG
rJMSF047G24- TTGATCTCAAAGCAGGCTCCGCAGCTCAGCCCATTGTTGAACAGCGCAGTGCTCAGTGCG
JMSF030A12+ TTGATCTCAAAGCAGGCTCCGCAGCTCAGCCCATTGTTGAACAGCGCAGTGCTCAGTGCG
JMFN004O15+ TTGATCTCAAAGCAGGCTCCGCAGCTCAGCCCATTGTTGAACAGCGCAGTGCTCAGTGCG
JMFN013A04+ TTGATCTCAAAGCAGGCTCCGCAGCTCAGCCCATTGTTGAACAGCGCAGTGCTCAGTGCG
JMFF005A23+ TTGATCTCAAAGCAGGCTCCGCAGCTCAGCCCATTGTTGAACAGCGCAGTGCTCAGTGCG
JMFF023L14+ TTGATCTCAAAGCAGGCTCCGCAGCTCAGCCCATTGTTGAACAGCGCAGTGCTCAGTGCG
JMFF023C17+ TTGATCTCAAAGCAGGCTCCGCAGCTCAGCCCATTGTTGAACAGCGCAGTGCTCAGTGCG
JMFF040G17+ TTGATCTCAAAGCAGGCTCCGCAGCTCAGCCCATTGTTGAACAGCGCAGTGCTCAGTGCG
JMFF048L23+ TTGATCTCAAAGCAGGCTCCGCAGCTCAGCCCATTGTTGAACAGCGCAGTGCTCAGTGCG
JMSF047G24+ TTGATCTCAAAGCAGGCTCCGCAGCTCAGCCCATTGTTGAACAGCGCAGTGCTCAGTGCG
JMFF013B16+ TTGATCTCAAAGCAGGCTCCGCAGCTCAGCCCATTGTTGAACAGCGCAGTGCTCAGTGCG
                      ____________________________________________________________
consensus TTGATCTCAAAGCAGGCTCCGCAGCTCAGCCCATTGTTGAACAGCGCAGTGCTCAGTGCG
 
. : . : . : . : . : . :
rJMFF023C17- GCATTGTTAACTCCGTAGCCCTGGCTATACAGATTCCCGTAACCACACGCGCCGCCCATA
rJMFF023L14- GCATTGTTAACTCCGTAGCCCTGGCTATACAGATTCCCGTAACCACACGCGCCGCCCATA
rJMFF005A23- GCATTGTTAACTCCGTAGCCCTGGCTATACAGATTCCCGTAACCACACGCGCCGCCCATA
rJMFF040G17- GCATTGTTAACTCCGTAGCCCTGGCTATACAGATTCCCGTAACCACACGCGCCGCCCATA
rJMSF030A24- GCATTGTTAACTCCGTAGCCCTGGCTATACAGATTCCCGTAACCACACGCGCCGCCCATA
rJMSF047G24- GCATTGTTAACTCCGTAGCCCTGGCTATACAGATTCCCGTAACCACACGCGCCGCCCATA
JMSF030A12+ GCATTGTTAACTCCGTAGCCCTGGCTATACAGATTCCCGTAACCACACGCGCCGCCCATA
JMFN004O15+ GCATTGTTAACTCCGTAGCCCTGGCTATACAGATTCCCGTAACCACACGCGCCGCCCATA
JMFN013A04+ GCATTGTTAACTCCGTAGCCCTGGCTATACAGATTCCCGTAACCACACGCGCCGCCCATA
JMFF005A23+ GCATTGTTAACTCCGTAGCCCTGGCTATACAGATTCCCGTAACCACACGCGCCGCCCATA
JMFF023L14+ GCATTGTTAACTCCGTAGCCCTGGCTATACAGATTCCCGTAACCACACGCGCCGCCCATA
JMFF023C17+ GCATTGTTAACTCCGTAGCCCTGGCTATACAGATTCCCGTAACCACACGCGCCGCCCATA
JMFF040G17+ GCATTGTTAACTCCGTAGCCCTGGCTATACAGATTCCCGTAACCACACGCGCCGCCCATA
JMFF048L23+ GCATTGTTAACTCCGTAGCCCTGGCTATACAGATTCCCGTAACCCCACGCGCCGCCCATA
JMSF047G24+ GCATTGTTAACTCCGTAGCCCTGGCTATACAGATTCCCGTAACCACACGCGCCGCCCATA
JMFF013B16+ GCATTGTTAACTCCGTAGCCCTGGCTATACAGATTCCCGTAACCACACGCGCCGCCCATA
                      ____________________________________________________________
consensus GCATTGTTAACTCCGTAGCCCTGGCTATACAGATTCCCGTAACCACACGCGCCGCCCATA
 
. : . : . : . : . : . :
rJMFF023C17- GTGCCAGAAGCGTCAGCGCCGCCGTAAAAGGTAGCGTGGGCGGTCTGCCAGGCGCCGCCG
rJMFF023L14- GTGCCAGAAGCGTCAGCGCCGCCGTAAAAGGTAGCGTGGGCGGTCTGCCAGGC
rJMFF005A23- GTGCCAG
rJMFF040G17- GTGCCAGAAGCGTCAGCGCCGCCGTAAAAGGTAGCGTGGGCGGTCTGCCAGGCGCCGCCG
rJMSF030A24- GTGCCAGAAGCGTCAGCGCCGCCGTAAAAGGTAGCGTGGGCGGTCTGCCAGGCGCCGCCG
rJMSF047G24- GTGCCAGAAGCGTCAGCGCCGCCGTAAAAGGTAGCGTGGGCGGTCTGCCAGGCGCCGCCG
JMSF030A12+ GTGCCAGAAGCGTCAGCGCCGCCGTAAAAGGTAGCGTGGGCGGTCTGCCAGGCGCCGCCG
JMFN004O15+ GTGCCAGAAGCGTCAGCGCCGCCGTAAAAGGTAGCGTGGGCGGTCTGCCAGGCGCCGCCG
JMFN013A04+ GTGCCAGAAGCGTCAGCGCCGCCGTAAAAGGTAGCGTGGGCGGTCTGCCAGGCGCCGCCG
JMFF005A23+ GTGCCAGAAGCGTCAGCGCCGCCGTAAAAGGTAGCGTGGGCGGTCTGCCAGGCGCCGCCG
JMFF023L14+ GTGCCAGAAGCGTCAGCGCCGCCGTAAAAGGTAGCGTGGGCGGTCTGCCAGGCGCCGCCG
JMFF023C17+ GTGCCAGAAGCGTCAGCGCCGCCGTAAAAGGTAGCGTGGGCGGTCTGCCAGGCGCCGCCG
JMFF040G17+ GTGCCAGAAGCGTCAGCGCCGCCGTAAAAGGTAGCGTGGGCGGTCTGCCAGGCGCCGCCG
JMFF048L23+ GTGCCAGAAGCGTCAGCGCCGCCGTAAAAGGTAGCGTGGGCGGTCTGCCAGGCGCCGCCG
JMSF047G24+ GTGCCAGAAGCGTCAGCGCCGCCGTAAAAGGTAGCGTGGGCGGTCTGCCAGGCGCCGCCG
JMFF013B16+ GTGCCAGAAGCGTCAGCGCCGCCGTAAAAGGTAGCGTGGGCGGTCTGCCAGGCGCCGCCG
                      ____________________________________________________________
consensus GTGCCAGAAGCGTCAGCGCCGCCGTAAAAGGTAGCGTGGGCGGTCTGCCAGGCGCCGCCG
 
. : . : . : . : . : . :
rJMFF023C17- GAGTAAACGCCGGGG-ATTCTAGCATGAACAGCAGTGA
rJMFF040G17- GAGTAAACGCCGGGG-ATTCTAGCATGAACAGCAGTGAG
rJMSF030A24- GAGTAAACGCCGGGGAATTCTAGCATGAACAGCAGTGAGAGA
rJMSF047G24- GAGTAAACGCCGGGGAATTCTAGCATGAACAGCAGTGAGAGA
JMSF030A12+ GAGTAAACGCCGGGG-ATTCTAGCATGAACAGCAGTGAGAGAACAGAGGAGAAGAGCAAT
JMFN004O15+ GAGTAAACGCCGGGG-ATTCTAGCATGAACAGCAGTGAGAGAACAGAGGAGAAGAGCAAT
JMFN013A04+ GAGTAAACGCCGGGG-ATTCTAGCATGAACAGCAGTGAGAGAACAGAGGAGAAGAGCAAT
JMFF005A23+ GAGTAAACGCCGGGG-ATTCTAGCATGAACAGCAGTGAGAGAACAGAGGAGAAGAGCAAT
JMFF023L14+ GAGTAAACGCCGGGG-ATTCTAGCATGAACAGCAGTGAGAGAACAGAGGAGAAGAGCAAT
JMFF023C17+ GAGTAAACGCCGGGG-ATTCTAGCATGAACAGCAGTGAGAGAACAGAGGAGAAGAGCAAT
JMFF040G17+ GAGTAAACGCCGGGG-ATTCTAGCATGAACAGCAGTGAGAGAACAGAGGAGAAGAGCAAT
JMFF048L23+ GAGTAAACGCCGGGG-ATTCTAGCATGAACAGCAGTGAGAGAACAGAGGAGAAGAGCAAT
JMSF047G24+ GAGTAAACGCCGGGG-ATTCTAGCATGAACAGCAGTGAGAGAACAGAGGAGAAGAGCAAT
JMFF013B16+ GAGTAAACGCCGGGG-ATTCTAGCATGAACAGCAGTGAGAGAACAGAGGAGAAGAGCAAT
                      ____________________________________________________________
consensus GAGTAAACGCCGGGG-ATTCTAGCATGAACAGCAGTGAGAGAACAGAGGAGAAGAGCAAT
 
. : . : . : . : . : . :
JMSF030A12+ GCAGAGGACTCGAACCGCTGCCATTTTCCCAGAATCACAAAAGTATTCAAATTCTGCGCG
JMFN004O15+ GCAGAGGACTCGAACCGCTGCCATTTTCCCAGAATCACAAAAGTATTCAATTTCTGCGCG
JMFN013A04+ GCAGAGGACTCGAACCGCTGCCATTTTCCCAGAATCACAAAAGTATTCAAATTCTGCGCG
JMFF005A23+ GCAGAGGACTCGAACCGCTGCCATTTTCCCAGAATCACAAAAGTATTCAAATTCTGCGCG
JMFF023L14+ GCAGAGGACTCGAACCGCTGCCATTTTCCCAGAATCACAAAAGTATTCAAATTCTGCGCG
JMFF023C17+ GCAGAGGACTCGAACCGCTGCCATTTTCCCAGAATCACAAAAGTATTCAAATTCTGCGCG
JMFF040G17+ GCAGAGGACTCGAACCGCTGCCATTTTCCCAGAATCACAAAAGTATTCAAATTCTGCGCG
JMFF048L23+ GCAGAGGACTCGAACCGCTGCCATTTTCCCAGAATCACAAAAGTATTCAAATTCTGCGCG
JMSF047G24+ GCAGAGGACTCGAACCGCTGCCATTTTCCCAGAATCACAAAAGTATTCAAATTCTGCGCG
JMFF013B16+ GCAGAGGACTCGAACCGCTGCCATTTTCCCAGAATCACAAAAGTATTCAAATTCTGCGCG
                      ____________________________________________________________
consensus GCAGAGGACTCGAACCGCTGCCATTTTCCCAGAATCACAAAAGTATTCAAATTCTGCGCG
 
. : . : . : . : . : . :
JMSF030A12+ TATGAGAGAGCGAAAGGGGTTTTGGAAGAAAGTATAGGAATGTGGGTTTGGGAG
JMFN004O15+ TATGAGAGAGCGAAAGGGGTTTTGGAAGAAA
JMFN013A04+ TATGAGAGAGCGAAAGGGGTTTTGGAAGAAAG
JMFF005A23+ TATGAGAGAGCGAAAGGGGTTTTGGAAGAAAGTATAGGAATGTGGGTTTGGGAGGC
JMFF023L14+ TATGAGAGAGCGAAAGGGGTTTTGGAAGAAAGTATAGGAATGTGGGTTTGGGAGGC
JMFF023C17+ TATGAGAGAGCGAAAGGGGTTTTGGAAGAAAGTATAGGAATATGGGTTTAGGAGG
JMFF040G17+ TATGAGAGAGCGAAAGGGGTTTTGGAAGAAAGTATAGGAATATGGGTTTAGGAGG
JMFF048L23+ TATGAGAGAGCGAAAGGGG-TTTGGAAGAAAGTATAGGAATGTGGGTTTGGGAGGC
JMSF047G24+ TATGAGAGAGCGAAAGGGGTTTTGGAAGAAAGTATAGGAATGTGGGTTTGGGAGGC
JMFF013B16+ TATGAGAGAGCGAAAGGGGTTTTGGAAGAAAGTATAGGAATGTGGGTTTGGGAGGCGAAT
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consensus TATGAGAGAGCGAAAGGGGTTTTGGAAGAAAGTATAGGAATGTGGGTTTGGGAGGCGAAT