| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF012B21 | Sequence | 532 | 007325 (4) | ref|XP_006356916.1| | 1e-28 | PREDICTED: glutamate receptor 3.4-like isoform X1 [Solanum tuberosum] ref|XP_006 | 736 | 013653 (2) | ref|XP_006367285.1| | 2e-29 | PREDICTED: glutamate receptor 3.4-like isoform X1 [Solanum tuberosum] ref|XP_006 |
| JMFF013A05 | Sequence | 488 | 007325 (4) | ref|XP_006356916.1| | 7e-21 | PREDICTED: glutamate receptor 3.4-like isoform X1 [Solanum tuberosum] ref|XP_006 | 799 | 013653 (2) | ref|XP_006367285.1| | 2e-45 | PREDICTED: glutamate receptor 3.4-like isoform X1 [Solanum tuberosum] ref|XP_006 |
| JMFS054C07 | Sequence | 606 | 007325 (4) | ref|XP_006356916.1| | 1e-71 | PREDICTED: glutamate receptor 3.4-like isoform X1 [Solanum tuberosum] ref|XP_006 | |||||
| JMFS165C01 | Sequence | 617 | 007325 (4) | ref|XP_006356916.1| | 1e-55 | PREDICTED: glutamate receptor 3.4-like isoform X1 [Solanum tuberosum] ref|XP_006 | |||||
This contig is upended
. : . : . : . : . : . :
JMFS054C07+ TATGAGATCAGCCACAGCCAGCATTTGGAAGCGATCATTCGTGA
____________________________________________________________
consensus TATGAGATCAGCCACAGCCAGCATTTGGAAGCGATCATTCGTGA
. : . : . : . : . : . :
JMFS054C07+ CAGTGCGCAGAAAGAAAGGGTTCTGCAGAGAATTGAGGCTCGGGTCTGTTGCCCCAAATG
JMFS165C01+ TGCCCCAAATG
____________________________________________________________
consensus CAGTGCGCAGAAAGAAAGGGTTCTGCAGAGAATTGAGGCTCGGGTCTGTTGCCCCAAATG
. : . : . : . : . : . :
JMFS054C07+ ATAAAAGCGGGACTTGAAGCTCATTCACTATATGCGATATTACATGCGCTATTCCTGAGG
JMFS165C01+ ATAAAAGCGGGACTTGAAGCTCATTCACTATATGCGATATTACATGCGCTATTCCTGAGG
____________________________________________________________
consensus ATAAAAGCGGGACTTGAAGCTCATTCACTATATGCGATATTACATGCGCTATTCCTGAGG
. : . : . : . : . : . :
JMFS054C07+ ATTGCGGCCCAATTGCAGCAACTATGTTGCTTTCCATCACCTGCAGAGCATCAATCATTC
JMFS165C01+ ATTGCGGCCCAATTGCAGCAACTATGTTGCTTTCCATCACCTGCAGAGCATCAATCATTC
____________________________________________________________
consensus ATTGCGGCCCAATTGCAGCAACTATGTTGCTTTCCATCACCTGCAGAGCATCAATCATTC
. : . : . : . : . : . :
JMFS054C07+ CAATGAATCCACTGCAATTAGTATCATGCATTATGACGTTCAGCTTAGTGCCATTGAGAA
JMFS165C01+ CAATGAATCCACTGCAATTAGTATCATGCATTATGACGTTCAGCTTAGTGCCATTGAGAA
JMFF012B21+ CTGCAATTAGTATCATGCATTATGACGTTCAGCTTAGTGCCATTGAGAA
JMFF013A05+ ATTGAGAA
____________________________________________________________
consensus CAATGAATCCACTGCAATTAGTATCATGCATTATGACGTTCAGCTTAGTGCCATTGAGAA
. : . : . : . : . : . :
JMFS054C07+ TGGTCGAATCAGAATTGACATCATCCACTGCAGCTTCCAGGGCAGGCTTCACAGACTCGC
JMFS165C01+ TGGTCGAATCAGAATTGACATCATCCACTGCAGCTTCCAGGGCAGGCTTCACAGACTCGC
JMFF012B21+ TGGTCGAATCAGAATTGACATCATCCACTGCAGCTTCCAGGGCAGGCTTCACAGACTCGC
JMFF013A05+ TGGTCGAATCAGAATTGACATCATCCACTGCAGCTTCCAGGGCAGGCTTCACAGACTCGC
____________________________________________________________
consensus TGGTCGAATCAGAATTGACATCATCCACTGCAGCTTCCAGGGCAGGCTTCACAGACTCGC
. : . : . : . : . : . :
JMFS054C07+ CAATAACCGAATGGACTGTGAACATAACCCCAACGTTCACCTCCTTCGGCCTAGAAGACG
JMFS165C01+ CAATAACCGAATGGACTGTGAACATAACCCCAACGTTCACCTCCTTCGGCCTAGAAGACG
JMFF012B21+ CAATAACCGAATGGACTGTGAACATAACCCCAACGTTCACCTCCTTCGGCCTAGAAGACG
JMFF013A05+ CAATAACNGAATGGACTGTGAACATAACCCCAACGTTCACCTCCTTCGGCCTAGAAGACG
____________________________________________________________
consensus CAATAACCGAATGGACTGTGAACATAACCCCAACGTTCACCTCCTTCGGCCTAGAAGACG
. : . : . : . : . : . :
JMFS054C07+ AAGGAACAGTGTCGTTTTCATTCCCTCCAAGGACTGCCAGAGGCACCCATATGCAAGAAA
JMFS165C01+ AAGGAACAGTGTCGTTTTCATTCCCTCCAAGGACTGCCAGAGGCACCCATATGCAAGAAA
JMFF012B21+ AAGGAACAGTGTCGTTTTCATTCCCTCCAAGGACTGCCAGAGGCACCCATATGCAAGAAA
JMFF013A05+ AAGGAACAGTGTCGTTTTCATTCCCTCCAAGGACTGCCAGAGGCACCCATATGCAAGAAA
____________________________________________________________
consensus AAGGAACAGTGTCGTTTTCATTCCCTCCAAGGACTGCCAGAGGCACCCATATGCAAGAAA
. : . : . : . : . : . :
JMFS054C07+ TGGCCAACAGAAAGGCTCTCCTCAGCCATACATGGACCCCCATCTCTCTACTAGCTAGCA
JMFS165C01+ TGGCCAACAGAAAGGCTCTCCTCAGCCATACATGGACCCCCATCTCTCTACTAGCTAGCA
JMFF012B21+ TGGCCAACAGAAAGGCTCTCCTCAGCCATACATGGACCCCCATCTCCCTACTAGCTAGCA
JMFF013A05+ TGGCCAACAGAAAGGCTCTCCTCAGCCATACATGGACCCCCATCTCCCTACTAGCTAGCA
____________________________________________________________
consensus TGGCCAACAGAAAGGCTCTCCTCAGCCATACATGGACCCCCATCTCTCTACTAGCTAGCA
. : . : . : . : . : . :
JMFS054C07+ GCCAACTACTGGCCTTTTTGAGGAGAAATCCACATCACCATATCTTCAAGAAATCAAGCC
JMFS165C01+ GCCAACTACTGGCCTTTTTGAGGAGAAATCCACATCACCATATCTTCAAGAAATCAAGCC
JMFF012B21+ GCCAACTACTGGCCTTTTTGAGGAGAAATCCACATCACCATATCTTCAAGAAATCAAGCC
JMFF013A05+ GCCAACTACTGGCCTTTTTGAGGAGAAATCCACATCACCATATCTTCAAGAAATCAAGCC
____________________________________________________________
consensus GCCAACTACTGGCCTTTTTGAGGAGAAATCCACATCACCATATCTTCAAGAAATCAAGCC
. : . : . : . : . : . :
JMFS054C07+ CATCACCATGTCTGCAAGAAAA
JMFS165C01+ CATCACCATGTCTGCAAGAAAACAAGCTCCACCTAACAAACAGATGAAGAAGATAAAAGC
JMFF012B21+ CATCACCATGTCTGCAAGAAAACAAGCTCCACCTAACAAACAGATGAAGAAGATAAAAGC
JMFF013A05+ CATCACCATGTCTGCAAGAAAACAAGCTCCACCTAACAAACAGATGAAGAAGATAAAAGC
____________________________________________________________
consensus CATCACCATGTCTGCAAGAAAACAAGCTCCACCTAACAAACAGATGAAGAAGATAAAAGC
. : . : . : . : . : . :
JMFS165C01+ TTAAAGCTGAAATTCAAGTTTAAAATTTCAACACTAGCTGAGCCCACCCAAAGAATCTTG
JMFF012B21+ TTAAAGCTGAAATTCAAGTTTAAAATTTCAACACTAGCTGAGCCCACCCAAAGAATCTTG
JMFF013A05+ TTAAAGCTGAAATTCAAGTTTAAAATTTCAACACTAGCTGAGCCCACCCAAAGAATCTTG
____________________________________________________________
consensus TTAAAGCTGAAATTCAAGTTTAAAATTTCAACACTAGCTGAGCCCACCCAAAGAATCTTG
. : . : . : . : . : . :
JMFS165C01+ AATGAA
JMFF012B21+ AATGAAGAGAGAGTTTTCATGACTTTCACATGTTATGAATAGGGCAGTTTTCTATCCCTC
JMFF013A05+ AATGAAGAGAGAGTTTTCATGACTTTCACATGTTATGAATAGGGCAGTTTTCTATCCCTC
____________________________________________________________
consensus AATGAAGAGAGAGTTTTCATGACTTTCACATGTTATGAATAGGGCAGTTTTCTATCCCTC