clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF005O05 | Sequence | 479 | 007295 (2) | ref|XP_006359745.1| | 7e-25 | PREDICTED: peptidyl-tRNA hydrolase 2, mitochondrial-like [Solanum tuberosum] | 733 | 007295 (2) | ref|XP_006359745.1| | 8e-70 | PREDICTED: peptidyl-tRNA hydrolase 2, mitochondrial-like [Solanum tuberosum] |
This contig is upended
. : . : . : . : . : . :
rJMFF005O05- TGGGCAAACATGACATCAAGACAAGTTCCATAAACATTAAAATGAATGTCTCTAATCCGT
____________________________________________________________
consensus TGGGCAAACATGACATCAAGACAAGTTCCATAAACATTAAAATGAATGTCTCTAATCCGT
. : . : . : . : . : . :
rJMFF005O05- TTCCTAAAATGAACCAATAAACTAGACTAGGACATAGAGGATCTTTCTAACACTACATAT
____________________________________________________________
consensus TTCCTAAAATGAACCAATAAACTAGACTAGGACATAGAGGATCTTTCTAACACTACATAT
. : . : . : . : . : . :
rJMFF005O05- CGGACCATTCTGCCATAAGAATCTGTTTTCGAGAAGCAGAACTGCCATCCATGAAGAACG
____________________________________________________________
consensus CGGACCATTCTGCCATAAGAATCTGTTTTCGAGAAGCAGAACTGCCATCCATGAAGAACG
. : . : . : . : . : . :
rJMFF005O05- ACGACATCTCTTCTGTGAGCTCATATGTCTGATCTCGAGAGAATTGAGAAGAAACTACCC
____________________________________________________________
consensus ACGACATCTCTTCTGTGAGCTCATATGTCTGATCTCGAGAGAATTGAGAAGAAACTACCC
. : . : . : . : . : . :
rJMFF005O05- TAGTACTCAACCGCCATCAAAGCAAATTCAGTTTCCCGGTTATAGAATCCACCGCTGCTT
____________________________________________________________
consensus TAGTACTCAACCGCCATCAAAGCAAATTCAGTTTCCCGGTTATAGAATCCACCGCTGCTT
. : . : . : . : . : . :
rJMFF005O05- TACTTCCAGGCCCCACAGCAAGAACTGTTTTCGAACCAGAAGCAACCTGTGTACGTCCCG
____________________________________________________________
consensus TACTTCCAGGCCCCACAGCAAGAACTGTTTTCGAACCAGAAGCAACCTGTGTACGTCCCG
. : . : . : . : . : . :
rJMFF005O05- CATCTGCAACCACAAAAGTTGGGAGGCCTATGCTGTCAGCTGCTTCCTTCAAGTTGTTCA
____________________________________________________________
consensus CATCTGCAACCACAAAAGTTGGGAGGCCTATGCTGTCAGCTGCTTCCTTCAAGTTGTTCA
. : . : . : . : . : . :
rJMFF005O05- TTTCTTGCTGATTCTTGCAGGTAACAACTATTTTGGGCTGTCCACAAAGCTCCCACTGCC
____________________________________________________________
consensus TTTCTTGCTGATTCTTGCAGGTAACAACTATTTTGGGCTGTCCACAAAGCTCCCACTGCC
. : . : . : . : . : . :
rJMFF005O05- TCAACAGAGACCTATCACTGGACATTAGCTCTGAATACATGCCAGTCGCAGCATGTGCAC
JMFF005O05+ CAACAGAGACCTATCACTGGACATTAGCTCTGAATACATGCCAGTCGCAGCATGTGCAC
____________________________________________________________
consensus TCAACAGAGACCTATCACTGGACATTAGCTCTGAATACATGCCAGTCGCAGCATGTGCAC
. : . : . : . : . : . :
rJMFF005O05- ATTGGGATGCAATTTTTCCTTGCCCCATCTTCAAGTCCCGCCTTACCACCAAAACCATTT
JMFF005O05+ ATTGGGATGCAATTTTTCCTTGCCCCATCTTCAAGTCCCGCCTTACCACCAAAACCATTT
____________________________________________________________
consensus ATTGGGATGCAATTTTTCCTTGCCCCATCTTCAAGTCCCGCCTTACCACCAAAACCATTT
. : . : . : . : . : . :
rJMFF005O05- TGAGCTCGTCATCAGAGCTAGCTGCTCCAGGGGACATTATCTTCTCCTGTTGGTATTTGG
JMFF005O05+ TGAGCTCGTCATCAGAGCTAGCTGCTCCAGGGGACATTATCTTCTCCTGTTGGTATTTGG
____________________________________________________________
consensus TGAGCTCGTCATCAGAGCTAGCTGCTCCAGGGGACATTATCTTCTCCTGTTGGTATTTGG
. : . : . : . : . : . :
rJMFF005O05- ACAACAAGCGACTCTTCCTAGTTAGAGAGCTGCTGGTGCTTTTGTTATTGCTGGGGG
JMFF005O05+ ACAACAAGCGACTCTTCCTAGTTAGAGAGCTGCTGGTGCTTTTGTTATTGCTGGGGGTGG
____________________________________________________________
consensus ACAACAAGCGACTCTTCCTAGTTAGAGAGCTGCTGGTGCTTTTGTTATTGCTGGGGGTGG
. : . : . : . : . : . :
JMFF005O05+ GTGGCTTCGACCAATCCAATAACAGTCCAAGAATGAACCCAATTACTACCCCGGGTATAA
____________________________________________________________
consensus GTGGCTTCGACCAATCCAATAACAGTCCAAGAATGAACCCAATTACTACCCCGGGTATAA
. : . : . : . : . : . :
JMFF005O05+ AGTTCTCTGGCTTGAAACTCGCTCCTACCCATTCTTTCTGCTCTTTCGGCTTCTTTGAAG
____________________________________________________________
consensus AGTTCTCTGGCTTGAAACTCGCTCCTACCCATTCTTTCTGCTCTTTCGGCTTCTTTGAAG
. : . : . : . : . : . :
JMFF005O05+ TTTGAGAATAACGCTGCATTGGGTTTCTGGTAGAAGAAGAACTACCTGCTTATGATAGGG
____________________________________________________________
consensus TTTGAGAATAACGCTGCATTGGGTTTCTGGTAGAAGAAGAACTACCTGCTTATGATAGGG
. : . : . : . : . : . :
JMFF005O05+ GCCTCAAAGTTTCAGCGGTGGAGCTGCAGTTACATTAGAGTGGCACCATCCGACTGATAC
____________________________________________________________
consensus GCCTCAAAGTTTCAGCGGTGGAGCTGCAGTTACATTAGAGTGGCACCATCCGACTGATAC