Contig 007285:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF004H08Sequence551007285 (2)ref|XP_006438229.1|2e-57hypothetical protein CICLE_v10031037mg [Citrus clementina] gb|ESR51469.1| hypoth743008262 (2)gb|AAM67369.1|1e-71unknown [Arabidopsis thaliana]
JMFF033A22Sequence592007285 (2)ref|XP_006438229.1|1e-66hypothetical protein CICLE_v10031037mg [Citrus clementina] gb|ESR51469.1| hypoth534008262 (2)ref|XP_010932070.1|2e-15PREDICTED: uncharacterized protein At1g04910 [Elaeis guineensis]

Alignment

This contig is upended


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JMFF033A22+                                           GTAAAATAAGAGTGGCATTCATTATTTT
                      ____________________________________________________________
consensus                                             GTAAAATAAGAGTGGCATTCATTATTTT
 
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JMFF033A22+           GGCCACTGCAACAGCANTGCAGATAGCAATTCTTTGCTGGTTTAGACCACCCTCAGCATG
                      ____________________________________________________________
consensus             GGCCACTGCAACAGCANTGCAGATAGCAATTCTTTGCTGGTTTAGACCACCCTCAGCATG
 
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JMFF033A22+           AATAAATATGTATCCATTTGTTTCATTCATAGGTGGAAGATCCTTTCGCCTTTCAGCACA
JMFF004H08+                                                    CCTTTCGCCTTTCAGCACA
                      ____________________________________________________________
consensus             AATAAATATGTATCCATTTGTTTCATTCATAGGTGGAAGATCCTTTCGCCTTTCAGCACA
 
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JMFF033A22+           AGCCTTCCATGAGGTCGTGGCAGAATAAGGATTCTCCCAGAGTGAAGGAGGCTCTTTAAC
JMFF004H08+           AGCCTTCCATGAGGTCGTGGCAGAATAAGGATTCTCCCAGAGTGAAGGAGGCTCTTTAAC
                      ____________________________________________________________
consensus             AGCCTTCCATGAGGTCGTGGCAGAATAAGGATTCTCCCAGAGTGAAGGAGGCTCTTTAAC
 
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JMFF033A22+           CCGTGGACAATGAAGAGTTATGCCCTCCTTGATGCATAAATATGGTGCATTCAATCTGTT
JMFF004H08+           CCGTGGACAATGAAGAGTTATGCCCTCCTTGATGCATAAATATGGTGCATTCAATCTGTT
                      ____________________________________________________________
consensus             CCGTGGACAATGAAGAGTTATGCCCTCCTTGATGCATAAATATGGTGCATTCAATCTGTT
 
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JMFF033A22+           GAAAATTGAAAAGGCCGAAATCATTACAGCGATGACGATAACGGCGCCGAAGAGAAAGAA
JMFF004H08+           GAAAATTGAAAAGGCCGAAATCATTACAGCGATGACGATAACGGCGCCGAAGAGAAAGAA
                      ____________________________________________________________
consensus             GAAAATTGAAAAGGCCGAAATCATTACAGCGATGACGATAACGGCGCCGAAGAGAAAGAA
 
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JMFF033A22+           GATCTTGGAATTGTGAAGGTGAGACCTGTCGGCGAACAAGAAGGGGAACATCGACCGCAG
JMFF004H08+           GATCTTGGAATTGTGAAGGTGAGACCTGTCGGCGAACAAGAAGGGGAACATCGACCGCAG
                      ____________________________________________________________
consensus             GATCTTGGAATTGTGAAGGTGAGACCTGTCGGCGAACAAGAAGGGGAACATCGACCGCAG
 
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JMFF033A22+           ATTGGTGGATAACAGGGAGCGGATGCGATCTCGCGGATGACGGCCACGGTAGTTGTCTCC
JMFF004H08+           ATTGGTGGATAACAGGGAGCGGATGCGATCTCGCGGATGACGGCCACGGTAGTTGTCTCC
                      ____________________________________________________________
consensus             ATTGGTGGATAACAGGGAGCGGATGCGATCTCGCGGATGACGGCCACGGTAGTTGTCTCC
 
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JMFF033A22+           GTCGGCGTTGGGACTTCCCGGCAACGAGGGAGAGAAACCGACGTCGTCACGCTTCCCCTG
JMFF004H08+           GTCGGCGTTGGGACTTCCCGGCAACGAGGGAGAGAAACCGACGTCGTCACGCTTCCTCGG
                      ____________________________________________________________
consensus             GTCGGCGTTGGGACTTCCCGGCAACGAGGGAGAGAAACCGACGTCGTCACGCTTCCTCTG
 
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JMFF033A22+           AGACTGCGACGCTCGGGTACCCATGGAGCTGGAGTGGCGGAGTTCCGCCATAGCTCGCTT
JMFF004H08+           AGACTGCGACGCTCGGGTACCCATGGAGCTGGAGTGGCGGAGTTCCGCCATAGCTCGCTT
                      ____________________________________________________________
consensus             AGACTGCGACGCTCGGGTACCCATGGAGCTGGAGTGGCGGAGTTCCGCCATAGCTCGCTT
 
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JMFF033A22+           CGGACTGAAAGCCATCTTGAATTC                                    
JMFF004H08+           CGGACTGAAAGCCATCTTGAATTCTTCGGTAAACCCCCACTGCCTCTCTCTCTCTGTACT
                      ____________________________________________________________
consensus             CGGACTGAAAGCCATCTTGAATTCTTCGGTAAACCCCCACTGCCTCTCTCTCTCTGTACT