Contig 007284:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF004E14Sequence334007284 (4)gb|AHL44983.1|9e-284-coumarate:coenzyme A ligase 4 [Fraxinus mandshurica]805001294 (4)ref|XP_009603383.1|6e-134PREDICTED: 4-coumarate--CoA ligase-like 7 [Nicotiana tomentosiformis]
JMFF035B02Sequence540007284 (4)ref|XP_009786809.1|2e-64PREDICTED: 4-coumarate--CoA ligase-like 7 [Nicotiana sylvestris]728001294 (4)ref|XP_009603383.1|2e-108PREDICTED: 4-coumarate--CoA ligase-like 7 [Nicotiana tomentosiformis]
JMSF001K20Sequence294007284 (4)ref|XP_007016850.1|4e-26AMP-dependent synthetase and ligase family protein isoform 2, partial [Theobrom711001294 (4)ref|XP_009603383.1|3e-111PREDICTED: 4-coumarate--CoA ligase-like 7 [Nicotiana tomentosiformis]
JMSF009E02Sequence425007284 (4)ref|XP_009603383.1|2e-47PREDICTED: 4-coumarate--CoA ligase-like 7 [Nicotiana tomentosiformis]752001294 (4)ref|XP_009603383.1|2e-112PREDICTED: 4-coumarate--CoA ligase-like 7 [Nicotiana tomentosiformis]

Alignment

This contig is upended


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JMFF035B02+ CTTTGACTTTGTCGAGCAAT
                      ____________________________________________________________
consensus CTTTGACTTTGTCGAGCAAT
 
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JMFF035B02+ TGGGGAACGGTGACGATGAGCTTTGGGCTACAATCCTTGATTTGTTTGGAAAGCTCTGGA
                      ____________________________________________________________
consensus TGGGGAACGGTGACGATGAGCTTTGGGCTACAATCCTTGATTTGTTTGGAAAGCTCTGGA
 
. : . : . : . : . : . :
JMFF035B02+ ACTGTATACATTGGATTCACGGTCGTGGCAATGGCCCCGGCGGCGATGGCGCCCAAGAAG
JMSF009E02+ CGGCGGCGATGGCGCCCAAGAAG
                      ____________________________________________________________
consensus ACTGTATACATTGGATTCACGGTCGTGGCAATGGCCCCGGCGGCGATGGCGCCCAAGAAG
 
. : . : . : . : . : . :
JMFF035B02+ CAGAGTGGGAAGTCGATGGAGTTGGGAGAGAAGATAAGAACGACATCGTTTTTCCTAACA
JMSF009E02+ CAGAGTGGGAAGTCGATGGAGTTGGGAGAGAAGATAAGAACGACATCGTTTTTCCTAACA
                      ____________________________________________________________
consensus CAGAGTGGGAAGTCGATGGAGTTGGGAGAGAAGATAAGAACGACATCGTTTTTCCTAACA
 
. : . : . : . : . : . :
JMFF035B02+ CCCAGTTGATGCTTCAAGCCATGAGCGACTCTTGAGACCTGGGATTTCAACTGGGAGAAA
JMSF009E02+ CCCAGTTGATGCTTCAAGCCATGAGCGACTCTTGAGACCTGGGATTTCAACTGGGAGAAA
JMSF001K20+ AACTGGGAGAAA
JMFF004E14+ GACTCTTGAGACCTGGGATTTCAACTGGGAGAAA
                      ____________________________________________________________
consensus CCCAGTTGATGCTTCAAGCCATGAGCGACTCTTGAGACCTGGGATTTCAACTGGGAGAAA
 
. : . : . : . : . : . :
JMFF035B02+ GTCAATGTCCGGCCGGTGTCGGCGTCATGGATGGCCGGTTGGTCCGGGTACTGAGAAATG
JMSF009E02+ GTCAATGTCCGGCCGGTGTCGGCGTCATGGATGGCCGGTTGGTCCGGGTACTGAGAAATG
JMSF001K20+ GTCAATGTCCGGCCGGTGTCGGCGTCATGGATGGCCGGTTGGTCCGGGTACTGAGAAATG
JMFF004E14+ GTCAATGTCCGGCCGGTGTCGGCGTCATGGATGGCCGGTTGGTCCGGGTACTGAGAAATG
                      ____________________________________________________________
consensus GTCAATGTCCGGCCGGTGTCGGCGTCATGGATGGCCGGTTGGTCCGGGTACTGAGAAATG
 
. : . : . : . : . : . :
JMFF035B02+ TTCCGGAAGAGGAAGGAGACCATTGAGAGGTTGGGGTCCCGCGGGAGGACAATCGGCGGC
JMSF009E02+ TTCCGGAAGAGGAAGGAGACCATTGAGAGGTTGGGGTCCCGCGGGAGGACAATCGGCGGC
JMSF001K20+ TTCCGGAAGAGGAAGGAGACCATTGAGAGGTTGGGGTCCCGCGGGAGGACAATCGGCGGC
JMFF004E14+ TTCCGGAAGAGGAAGGAGACCATTGAGAGGTTGGGGTCCCGCGGGAGGACAATCGGCGGC
                      ____________________________________________________________
consensus TTCCGGAAGAGGAAGGAGACCATTGAGAGGTTGGGGTCCCGCGGGAGGACAATCGGCGGC
 
. : . : . : . : . : . :
JMFF035B02+ CGGAGAGATCTGTAGATTCCATCGCGGCCGTACCCAGACTTTTCCATAGCTAAGATTCGG
JMSF009E02+ CGGAGAGATCTGTAGATTCCATCGCGGCCGTACCCAGACTTTTCCATAGCTAAGATTCGG
JMSF001K20+ CGGAGAGATCTGTAGATTCCATCGCGGCCGTACCCAGACTTTTCCATAGCTAAGATTCGG
JMFF004E14+ CGGAGAGATCTGTAGATTCCATCGCGGCCGTACCCAGACTTTTCCATAGCTAAGATTCGG
                      ____________________________________________________________
consensus CGGAGAGATCTGTAGATTCCATCGCGGCCGTACCCAGACTTTTCCATAGCTAAGATTCGG
 
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JMFF035B02+ AGAAAATGGAAATTTGTGAAATTCGCCGGAGAGAGCAAGTACTTATCGGATTGCTGACGC
JMSF009E02+ AGAAAATGGAAATTTGTGAAATTCGCCGGAGAGAGCAAGTACTTATCGGATTGCTGACGC
JMSF001K20+ AGAAAATGGAAATTTGTGAAATTCGCCGGAGAGAGCAAGTACTTATCGGATTGCTGACGC
JMFF004E14+ AGAAAATGGAAATTTGTGAAATTCGCCGGAGAGAGCAAGTACTTATCGGATTGCTGACGC
                      ____________________________________________________________
consensus AGAAAATGGAAATTTGTGAAATTCGCCGGAGAGAGCAAGTACTTATCGGATTGCTGACGC
 
. : . : . : . : . : . :
JMFF035B02+ AGAATGACGAGAGCGTTTCCGAGAGTGTGGGCAAAACAC
JMSF009E02+ AGAATGACGAGAGCGTTTCCGAGAGTGTGGGCAAAACAC
JMSF001K20+ AGAATGACGAGAGCGTTTCCGAGAGTGTGGGCAAAACAC
JMFF004E14+ AGAATGACGAGAGCGTTTCCGAGAGTGTGGGCAAAACACGCAAATACATAAACAGCACTC
                      ____________________________________________________________
consensus AGAATGACGAGAGCGTTTCCGAGAGTGTGGGCAAAACACGCAAATACATAAACAGCACTC