clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF003B11 | Sequence | 581 | 007281 (8) | ref|XP_009782891.1| | 1e-112 | PREDICTED: eukaryotic translation initiation factor 3 subunit E [Nicotiana sylv | 748 | 004710 (9) | ref|XP_003519090.1| | 6e-117 | PREDICTED: eukaryotic translation initiation factor 3 subunit E-like [Glycine m |
JMFF011J13 | Sequence | 544 | 007281 (8) | ref|XP_009782891.1| | 2e-103 | PREDICTED: eukaryotic translation initiation factor 3 subunit E [Nicotiana sylv | 734 | 004710 (9) | ref|XP_007145575.1| | 4e-97 | hypothetical protein PHAVU_007G250100g [Phaseolus vulgaris] gb|ESW17569.1| hypot |
JMFF016G24 | Sequence | 300 | 007281 (8) | gb|KJB67152.1| | 8e-56 | hypothetical protein B456_010G177900 [Gossypium raimondii] | 705 | 004710 (9) | ref|XP_003519090.1| | 2e-75 | PREDICTED: eukaryotic translation initiation factor 3 subunit E-like [Glycine m |
JMFF034L22 | Sequence | 536 | 007281 (8) | ref|XP_009782891.1| | 1e-101 | PREDICTED: eukaryotic translation initiation factor 3 subunit E [Nicotiana sylv | 733 | 004710 (9) | ref|XP_003519090.1| | 2e-116 | PREDICTED: eukaryotic translation initiation factor 3 subunit E-like [Glycine m |
JMSF030O21 | Sequence | 645 | 007281 (8) | ref|XP_009782891.1| | 4e-134 | PREDICTED: eukaryotic translation initiation factor 3 subunit E [Nicotiana sylv | 698 | 004710 (9) | ref|XP_003519090.1| | 5e-110 | PREDICTED: eukaryotic translation initiation factor 3 subunit E-like [Glycine m |
JMSF033G15 | Sequence | 670 | 007281 (8) | ref|XP_009782891.1| | 7e-133 | PREDICTED: eukaryotic translation initiation factor 3 subunit E [Nicotiana sylv | 770 | 004710 (9) | ref|XP_003519090.1| | 5e-132 | PREDICTED: eukaryotic translation initiation factor 3 subunit E-like [Glycine m |
JMSF035A06 | Sequence | 649 | 007281 (8) | ref|XP_009782891.1| | 9e-135 | PREDICTED: eukaryotic translation initiation factor 3 subunit E [Nicotiana sylv | 758 | 004710 (9) | ref|XP_003519090.1| | 3e-119 | PREDICTED: eukaryotic translation initiation factor 3 subunit E-like [Glycine m |
JMSF048E01 | Sequence | 707 | 007281 (8) | ref|XP_009782891.1| | 8e-147 | PREDICTED: eukaryotic translation initiation factor 3 subunit E [Nicotiana sylv | 711 | 004710 (9) | ref|XP_003519090.1| | 1e-118 | PREDICTED: eukaryotic translation initiation factor 3 subunit E-like [Glycine m |
This contig is upended
. : . : . : . : . : . :
JMSF048E01+ TCCAT
____________________________________________________________
consensus TCCAT
. : . : . : . : . : . :
JMSF048E01+ TGTCATGGTGANGAAGATAAACAGACTCCAATGCATTAACCAAATTCTGCTTTGAACTTG
____________________________________________________________
consensus TGTCATGGTGANGAAGATAAACAGACTCCAATGCATTAACCAAATTCTGCTTTGAACTTG
. : . : . : . : . : . :
JMSF030O21+ ATGTAGCGGTGTTGAGAAACTCTTTGAGTCAATAATTTCCTTCAAGCGATTTAGTTCCTC
JMSF035A06+ ATGTAGCGGTGTTGAGAAACTCTTTGAGTCAATAATTTCCTTCAAGCGATTTAGTTCCTC
JMSF033G15+ ATGTAGCGGTGTTGAGAAACTCTTTGAGTCAATAATTTCCTTCAAGCGATTTAGTTCCTC
JMSF048E01+ ATGTAGCGGTGTTGAGAAACTCTTTGAGTCAATAATTTCCTTCAAGCGATTTAGTTCCTC
____________________________________________________________
consensus ATGTAGCGGTGTTGAGAAACTCTTTGAGTCAATAATTTCCTTCAAGCGATTTAGTTCCTC
. : . : . : . : . : . :
JMSF030O21+ AAGGGCAATATCCCAATTCTGCATTAATATCTCAGCAGCTAACTTTCCCCACAATGCACT
JMSF035A06+ AAGGGCAATATCCCAATTCTGCATTAATATCTCAGCAGCTAACTTTCCCCACAATGCACT
JMSF033G15+ AAGGGCAATATCCCAATTCTGCATTAATATCTCAGCAGCTAACTTTCCCCACAATGCACT
JMFF016G24+ ACAATGCACT
JMSF048E01+ AAGGGCAATATCCCAATTCTGCATTAATATCTCAGCAGCTAACTTTCCCCACAATGCACT
JMFF011J13+ CACT
JMFF003B11+ TGCATTAATATCTCAGCAGCTAACTTTCCCCACAATGCACT
____________________________________________________________
consensus AAGGGCAATATCCCAATTCTGCATTAATATCTCAGCAGCTAACTTTCCCCACAATGCACT
. : . : . : . : . : . :
JMSF030O21+ CAGGCTTCTGTCACTGTTTGTGCAAAGAGCCCGGTATTGATACAGATAATCAGCAGCACC
JMSF035A06+ CAGGCTTCTGTCACTGTTTGTGCAAAGAGCCCGGTATTGATACAGATAATCAGCAGCACC
JMSF033G15+ CAGGCTTCTGTCACTGTTTGTGCAAAGAGCCCGGTATTGATACAGATAATCAGCAGCACC
JMFF016G24+ CAGGCTTCTGTCACTGTTTGTGCAAAGAGCCCGGTATTGATACAGATAATCAGCAGCACC
JMSF048E01+ CAGGCTTCTGTCACTGTTTGTGCAAAGAGCCCGGTATTGATACAGATAATCAGCAGCACC
JMFF011J13+ CAGGCTTCTGTCACTGTTTGTGCAAAGAGCCCGGTATTGATACAGATAATCAGCAGCACC
JMFF034L22+ CTTCTGTCACTGTTTGTGCAAAGAGCCCGGTATTGATACAGATAATCAGCAGCACC
JMFF003B11+ CAGGCTTCTGTCACTGTTTGTGCAAAGAGCCCGGTATTGATACAGATAATCAGCAGCACC
____________________________________________________________
consensus CAGGCTTCTGTCACTGTTTGTGCAAAGAGCCCGGTATTGATACAGATAATCAGCAGCACC
. : . : . : . : . : . :
JMSF030O21+ AGAATAATTACCACATTCAAACTGAAATTTGGCATACTGATACAATGCCTCTATCTGCTC
JMSF035A06+ AGAATAATTACCACATTCAAACTGAAATTTGGCATACTGATACAATGCCTCTATCTGCTC
JMSF033G15+ AGAATAATTACCACATTCAAACTGAAATTTGGCATACTGATACAATGCCTCTATCTGCTC
JMFF016G24+ AGAATAATTACCACATTCAAACTGAAATTTGGCATACTGATACAATGCCTCTATCTGCTC
JMSF048E01+ AGAATAATTACCACATTCAAACTGAAATTTGGCATACTGATACAATGCCTCTATCTGCTC
JMFF011J13+ AGAATAATTACCACATTCAAACTGAAATTTGGCATACTGATACAATGCCTCTATCTGCTC
JMFF034L22+ AGAATAATTACCACATTCAAACTGAAATTTGGCATACTGATACAATGCCTCTATCTGCTC
JMFF003B11+ AGAATAATTACCACATTCAAACTGAAATTTGGCATACTGATACAATGCCTCTATCTGCTC
____________________________________________________________
consensus AGAATAATTACCACATTCAAACTGAAATTTGGCATACTGATACAATGCCTCTATCTGCTC
. : . : . : . : . : . :
JMSF030O21+ TGGACCAATCTGATACCGATCATTGAGTAATTGAAGATTGTGCTGTTTGTCAGCTCTTAA
JMSF035A06+ TGGACCAATCTGATACCGATCATTGAGTAATTGAAGATTGTGCTGTTTGTCAGCTCTTAA
JMSF033G15+ TGGACCAATCTGATACCGATCATTGAGTAATTGAAGATTGTGCTGTTTGTCAGCTCTTAA
JMFF016G24+ TGGACCAATCTGATACCGATCATTGAGTAATTGAAGATTGTGCTGTTTGTCAGCTCTTAA
JMSF048E01+ TGGACCAATCTGATACCGATCATTGAGTAATTGAAGATTGTGCTGTTTGTCAGCTCTTAA
JMFF011J13+ TGGACCAATCTGATACCGATCATTGAGTAATTGAAGATTGTGCTGTTTGTCAGCTCTTAA
JMFF034L22+ TGGACCAATCTGATACCGATCATTGAGTAATTGAAGATTGTGCTGTTTGTCAGCTCTTAA
JMFF003B11+ TGGACCAATCTGATACCGATCATTGAGTAATTGAAGATTGTGCTGTTTGTCAGCTCTTAA
____________________________________________________________
consensus TGGACCAATCTGATACCGATCATTGAGTAATTGAAGATTGTGCTGTTTGTCAGCTCTTAA
. : . : . : . : . : . :
JMSF030O21+ CTCTTGAACTGCATTTGCATTCTGCAAAAATTGAACCAATGGGGCAGCGGCCTCCTCTAG
JMSF035A06+ CTCTTGAACTGCATTTGCATTCTGCAAAAATTGAACCAATGGGGCAGCGGCCTCCTCTAG
JMSF033G15+ CTCTTGAACTGCATTTGCATTCTGCAAAAATTGAACCAATGGGGCAGCGGCCTCCTCTAG
JMFF016G24+ CTCTTGAACTGCATTTGCATTCTGCAAAAATTGAACCAATGGGGCAGCGGCCTCCTCTAG
JMSF048E01+ CTCTTGAACTGCATTTGCATTCTGCAAAAATTGAACCAATGGGGCAGCGGCCTCCTCTAG
JMFF011J13+ CTCTTGAACTGCATTTGCATTCTGCAAAAATTGAACCAATGGGGCAGCGGCCTCCTCTAG
JMFF034L22+ CTCTTGAACTGCATTTGCATTCTGCAAAAATTGAACCAATGGGGCAGCGGCCTCCTCTAG
JMFF003B11+ CTCTTGAACTGCATTTGCATTCTGCAAAAATTGAACCAATGGGGCAGCGGCCTCCTCTAG
____________________________________________________________
consensus CTCTTGAACTGCATTTGCATTCTGCAAAAATTGAACCAATGGGGCAGCGGCCTCCTCTAG
. : . : . : . : . : . :
JMSF030O21+ TGCCTTCAACCTTGCAACAACCTCAACTCTTCGATCCACCATTTCTTGTGGGACATCTTC
JMSF035A06+ TGCCTTCAACCTTGCAACAACCTCAACTCTTCGATCCACCATTTCTTGTGGGACATCTTC
JMSF033G15+ TGCCTTCAACCTTGCAACAACCTCAACTCTTCGATCCACCATTTCTTGTGGGACATCTTC
JMFF016G24+ TGCCTTCAACCTTGCAACAACCTCAACTCTTCGATCCACCATTTCTTGTG
JMSF048E01+ TGCCTTCAACCTTGCAACAACCTCAACTCTTCGATCCACCATTTCTTGTGGGACATCTTC
JMFF011J13+ TGCCTTCAACCTTGCAACAACCTCAACTCTTCGATCCACCATTTCTTGTGGGACATCTTC
JMFF034L22+ TGCCTTCAACCTTGCAACAACCTCAACTCTTCGATCCACCATTTCTTGTGGGACATCTTC
JMFF003B11+ TGCCTTCAACCTTGCAACAACCTCAACTCTTCGATCCACCATTTCTTGTGGGACATCTTC
____________________________________________________________
consensus TGCCTTCAACCTTGCAACAACCTCAACTCTTCGATCCACCATTTCTTGTGGGACATCTTC
. : . : . : . : . : . :
JMSF030O21+ AGTGTGATAGAGGGATTTGTGTATGTCCATAGCATAATCAACCATGTTGGTATCGTTGAG
JMSF035A06+ AGTGTGATAGAGGGATTTGTGTATGTCCATAGCATAATCAACCATGTTGGTATCGTTGAG
JMSF033G15+ AGTGTGATAGAGGGATTTGTGTATGTCCATAGCATAATCAACC
JMSF048E01+ AGTGTGATAGAGGGATTTGTGTATGTCCATAGCATAATCAACCATGTTGGTATCGTTGAG
JMFF011J13+ AGTGTGATAGAGGGATTTGTGTATGTCCATAGCATAATCAACCATGTTGGTATCGTTGAG
JMFF034L22+ AGTGTGATAGAGGGATTTGTGTATGTCCATAGCATAATCAACCATGTTGGTATCGTTGAG
JMFF003B11+ AGTGTGATAGAGGGATTTGTGTATGTCCATAGCATAATCAACCATGTTGGTATCGTTGAG
____________________________________________________________
consensus AGTGTGATAGAGGGATTTGTGTATGTCCATAGCATAATCAACCATGTTGGTATCGTTGAG
. : . : . : . : . : . :
JMSF030O21+ GAGCTCAATCTTAGCCTTGAGAATATCCTCATCGGCGTAGAGTTGACGCTCTTGCAGGAA
JMSF035A06+ GAGCTCAATCTTAGCCTTGAGAATATCCTCATCGGCGTAGAGTTGACGCTCTTGCAGGAA
JMSF048E01+ GAGCTCAATCTTAGCCTTGAGAATATCCTCATCGGCGTAGAGTTGACGCTCTTGCAGGAA
JMFF011J13+ GAGCTCAATCTTAGCCTTGAGAATATCCTCATCGGCGTAGAGTTGACGCTCTTGCAGGAA
JMFF034L22+ GAGCTCAATCTTAGCCTTGAGAATATCCTCATCGGCGTAGAGTTGACGCTCTTGCAGGAA
JMFF003B11+ GAGCTCAATCTTAGCCTTGAGAATATCCTCATCGGCGTAGAGTTGACGCTCTTGCAGGAA
____________________________________________________________
consensus GAGCTCAATCTTAGCCTTGAGAATATCCTCATCGGCGTAGAGTTGACGCTCTTGCAGGAA
. : . : . : . : . : . :
JMSF030O21+ TTCCAGCAAGGGGAACACCAGGTGCCGATCGAGTTGCGGAGCTATGCGCGGCGTCAGATC
JMSF035A06+ TTCCAGCAAGGGGAACACCAGGTGCCGATCGAGTTGCGGAGCTATGCGCGGCGTCAGATC
JMSF048E01+ TTCCAGCAAGGGGAACACCAGGTGCCGATCGAGTTGCGGAGCTATGCGCGGCGTCAGATC
JMFF011J13+ TTCCAGCAAGGGGAACACCAGGTGCCGATCGAGTTGCGGAGCTATGCGCGGCGTCAGATC
JMFF034L22+ TTCCAGCAAGGGGAACACCAGGTGCCGATCGAGTTGCGGAGCTATGCGCGGCGTCAGATC
JMFF003B11+ TTCCAGCAAGGGGAACACCAGGTGCCGATCGAGTTGCGGAGCTATGCGCGGCGTCAGATC
____________________________________________________________
consensus TTCCAGCAAGGGGAACACCAGGTGCCGATCGAGTTGCGGAGCTATGCGCGGCGTCAGATC
. : . : . : . : . : . :
JMSF030O21+ ATACTTCGCCGCCATACTTGCGCTCTGGAGATTGGCAGTTC
JMSF035A06+ ATACTTCGCCGCCATACTTGCGCTCTGGAGATTGGCAGT
JMSF048E01+ ATACTTCGCCGCCATACTTGCGCTCTGGAGATTGGCAGTTC
JMFF011J13+ ATACTTCGCCGCCATACTTGCGCTCTGGAGATTGGCAGTTCAGCTTTAGCGTTCAAGGAT
JMFF034L22+ ATACTTCGCCGCCATACTTGCGCTCTGGAGATTGGCAGTTCAGCTTTAGCGTTCAAGGAT
JMFF003B11+ ATACTTCGCCGCCATACTTGCGCTCTGGAGATTGGCAGTTCAGCTTTAGCGTTCAAGGAT
____________________________________________________________
consensus ATACTTCGCCGCCATACTTGCGCTCTGGAGATTGGCAGTTCAGCTTTAGCGTTCAAGGAT