Contig 007281:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF003B11Sequence581007281 (8)ref|XP_009782891.1|1e-112PREDICTED: eukaryotic translation initiation factor 3 subunit E [Nicotiana sylv748004710 (9)ref|XP_003519090.1|6e-117PREDICTED: eukaryotic translation initiation factor 3 subunit E-like [Glycine m
JMFF011J13Sequence544007281 (8)ref|XP_009782891.1|2e-103PREDICTED: eukaryotic translation initiation factor 3 subunit E [Nicotiana sylv734004710 (9)ref|XP_007145575.1|4e-97hypothetical protein PHAVU_007G250100g [Phaseolus vulgaris] gb|ESW17569.1| hypot
JMFF016G24Sequence300007281 (8)gb|KJB67152.1|8e-56hypothetical protein B456_010G177900 [Gossypium raimondii]705004710 (9)ref|XP_003519090.1|2e-75PREDICTED: eukaryotic translation initiation factor 3 subunit E-like [Glycine m
JMFF034L22Sequence536007281 (8)ref|XP_009782891.1|1e-101PREDICTED: eukaryotic translation initiation factor 3 subunit E [Nicotiana sylv733004710 (9)ref|XP_003519090.1|2e-116PREDICTED: eukaryotic translation initiation factor 3 subunit E-like [Glycine m
JMSF030O21Sequence645007281 (8)ref|XP_009782891.1|4e-134PREDICTED: eukaryotic translation initiation factor 3 subunit E [Nicotiana sylv698004710 (9)ref|XP_003519090.1|5e-110PREDICTED: eukaryotic translation initiation factor 3 subunit E-like [Glycine m
JMSF033G15Sequence670007281 (8)ref|XP_009782891.1|7e-133PREDICTED: eukaryotic translation initiation factor 3 subunit E [Nicotiana sylv770004710 (9)ref|XP_003519090.1|5e-132PREDICTED: eukaryotic translation initiation factor 3 subunit E-like [Glycine m
JMSF035A06Sequence649007281 (8)ref|XP_009782891.1|9e-135PREDICTED: eukaryotic translation initiation factor 3 subunit E [Nicotiana sylv758004710 (9)ref|XP_003519090.1|3e-119PREDICTED: eukaryotic translation initiation factor 3 subunit E-like [Glycine m
JMSF048E01Sequence707007281 (8)ref|XP_009782891.1|8e-147PREDICTED: eukaryotic translation initiation factor 3 subunit E [Nicotiana sylv711004710 (9)ref|XP_003519090.1|1e-118PREDICTED: eukaryotic translation initiation factor 3 subunit E-like [Glycine m

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF048E01+ TCCAT
                      ____________________________________________________________
consensus TCCAT
 
. : . : . : . : . : . :
JMSF048E01+ TGTCATGGTGANGAAGATAAACAGACTCCAATGCATTAACCAAATTCTGCTTTGAACTTG
                      ____________________________________________________________
consensus TGTCATGGTGANGAAGATAAACAGACTCCAATGCATTAACCAAATTCTGCTTTGAACTTG
 
. : . : . : . : . : . :
JMSF030O21+ ATGTAGCGGTGTTGAGAAACTCTTTGAGTCAATAATTTCCTTCAAGCGATTTAGTTCCTC
JMSF035A06+ ATGTAGCGGTGTTGAGAAACTCTTTGAGTCAATAATTTCCTTCAAGCGATTTAGTTCCTC
JMSF033G15+ ATGTAGCGGTGTTGAGAAACTCTTTGAGTCAATAATTTCCTTCAAGCGATTTAGTTCCTC
JMSF048E01+ ATGTAGCGGTGTTGAGAAACTCTTTGAGTCAATAATTTCCTTCAAGCGATTTAGTTCCTC
                      ____________________________________________________________
consensus ATGTAGCGGTGTTGAGAAACTCTTTGAGTCAATAATTTCCTTCAAGCGATTTAGTTCCTC
 
. : . : . : . : . : . :
JMSF030O21+ AAGGGCAATATCCCAATTCTGCATTAATATCTCAGCAGCTAACTTTCCCCACAATGCACT
JMSF035A06+ AAGGGCAATATCCCAATTCTGCATTAATATCTCAGCAGCTAACTTTCCCCACAATGCACT
JMSF033G15+ AAGGGCAATATCCCAATTCTGCATTAATATCTCAGCAGCTAACTTTCCCCACAATGCACT
JMFF016G24+ ACAATGCACT
JMSF048E01+ AAGGGCAATATCCCAATTCTGCATTAATATCTCAGCAGCTAACTTTCCCCACAATGCACT
JMFF011J13+ CACT
JMFF003B11+ TGCATTAATATCTCAGCAGCTAACTTTCCCCACAATGCACT
                      ____________________________________________________________
consensus AAGGGCAATATCCCAATTCTGCATTAATATCTCAGCAGCTAACTTTCCCCACAATGCACT
 
. : . : . : . : . : . :
JMSF030O21+ CAGGCTTCTGTCACTGTTTGTGCAAAGAGCCCGGTATTGATACAGATAATCAGCAGCACC
JMSF035A06+ CAGGCTTCTGTCACTGTTTGTGCAAAGAGCCCGGTATTGATACAGATAATCAGCAGCACC
JMSF033G15+ CAGGCTTCTGTCACTGTTTGTGCAAAGAGCCCGGTATTGATACAGATAATCAGCAGCACC
JMFF016G24+ CAGGCTTCTGTCACTGTTTGTGCAAAGAGCCCGGTATTGATACAGATAATCAGCAGCACC
JMSF048E01+ CAGGCTTCTGTCACTGTTTGTGCAAAGAGCCCGGTATTGATACAGATAATCAGCAGCACC
JMFF011J13+ CAGGCTTCTGTCACTGTTTGTGCAAAGAGCCCGGTATTGATACAGATAATCAGCAGCACC
JMFF034L22+ CTTCTGTCACTGTTTGTGCAAAGAGCCCGGTATTGATACAGATAATCAGCAGCACC
JMFF003B11+ CAGGCTTCTGTCACTGTTTGTGCAAAGAGCCCGGTATTGATACAGATAATCAGCAGCACC
                      ____________________________________________________________
consensus CAGGCTTCTGTCACTGTTTGTGCAAAGAGCCCGGTATTGATACAGATAATCAGCAGCACC
 
. : . : . : . : . : . :
JMSF030O21+ AGAATAATTACCACATTCAAACTGAAATTTGGCATACTGATACAATGCCTCTATCTGCTC
JMSF035A06+ AGAATAATTACCACATTCAAACTGAAATTTGGCATACTGATACAATGCCTCTATCTGCTC
JMSF033G15+ AGAATAATTACCACATTCAAACTGAAATTTGGCATACTGATACAATGCCTCTATCTGCTC
JMFF016G24+ AGAATAATTACCACATTCAAACTGAAATTTGGCATACTGATACAATGCCTCTATCTGCTC
JMSF048E01+ AGAATAATTACCACATTCAAACTGAAATTTGGCATACTGATACAATGCCTCTATCTGCTC
JMFF011J13+ AGAATAATTACCACATTCAAACTGAAATTTGGCATACTGATACAATGCCTCTATCTGCTC
JMFF034L22+ AGAATAATTACCACATTCAAACTGAAATTTGGCATACTGATACAATGCCTCTATCTGCTC
JMFF003B11+ AGAATAATTACCACATTCAAACTGAAATTTGGCATACTGATACAATGCCTCTATCTGCTC
                      ____________________________________________________________
consensus AGAATAATTACCACATTCAAACTGAAATTTGGCATACTGATACAATGCCTCTATCTGCTC
 
. : . : . : . : . : . :
JMSF030O21+ TGGACCAATCTGATACCGATCATTGAGTAATTGAAGATTGTGCTGTTTGTCAGCTCTTAA
JMSF035A06+ TGGACCAATCTGATACCGATCATTGAGTAATTGAAGATTGTGCTGTTTGTCAGCTCTTAA
JMSF033G15+ TGGACCAATCTGATACCGATCATTGAGTAATTGAAGATTGTGCTGTTTGTCAGCTCTTAA
JMFF016G24+ TGGACCAATCTGATACCGATCATTGAGTAATTGAAGATTGTGCTGTTTGTCAGCTCTTAA
JMSF048E01+ TGGACCAATCTGATACCGATCATTGAGTAATTGAAGATTGTGCTGTTTGTCAGCTCTTAA
JMFF011J13+ TGGACCAATCTGATACCGATCATTGAGTAATTGAAGATTGTGCTGTTTGTCAGCTCTTAA
JMFF034L22+ TGGACCAATCTGATACCGATCATTGAGTAATTGAAGATTGTGCTGTTTGTCAGCTCTTAA
JMFF003B11+ TGGACCAATCTGATACCGATCATTGAGTAATTGAAGATTGTGCTGTTTGTCAGCTCTTAA
                      ____________________________________________________________
consensus TGGACCAATCTGATACCGATCATTGAGTAATTGAAGATTGTGCTGTTTGTCAGCTCTTAA
 
. : . : . : . : . : . :
JMSF030O21+ CTCTTGAACTGCATTTGCATTCTGCAAAAATTGAACCAATGGGGCAGCGGCCTCCTCTAG
JMSF035A06+ CTCTTGAACTGCATTTGCATTCTGCAAAAATTGAACCAATGGGGCAGCGGCCTCCTCTAG
JMSF033G15+ CTCTTGAACTGCATTTGCATTCTGCAAAAATTGAACCAATGGGGCAGCGGCCTCCTCTAG
JMFF016G24+ CTCTTGAACTGCATTTGCATTCTGCAAAAATTGAACCAATGGGGCAGCGGCCTCCTCTAG
JMSF048E01+ CTCTTGAACTGCATTTGCATTCTGCAAAAATTGAACCAATGGGGCAGCGGCCTCCTCTAG
JMFF011J13+ CTCTTGAACTGCATTTGCATTCTGCAAAAATTGAACCAATGGGGCAGCGGCCTCCTCTAG
JMFF034L22+ CTCTTGAACTGCATTTGCATTCTGCAAAAATTGAACCAATGGGGCAGCGGCCTCCTCTAG
JMFF003B11+ CTCTTGAACTGCATTTGCATTCTGCAAAAATTGAACCAATGGGGCAGCGGCCTCCTCTAG
                      ____________________________________________________________
consensus CTCTTGAACTGCATTTGCATTCTGCAAAAATTGAACCAATGGGGCAGCGGCCTCCTCTAG
 
. : . : . : . : . : . :
JMSF030O21+ TGCCTTCAACCTTGCAACAACCTCAACTCTTCGATCCACCATTTCTTGTGGGACATCTTC
JMSF035A06+ TGCCTTCAACCTTGCAACAACCTCAACTCTTCGATCCACCATTTCTTGTGGGACATCTTC
JMSF033G15+ TGCCTTCAACCTTGCAACAACCTCAACTCTTCGATCCACCATTTCTTGTGGGACATCTTC
JMFF016G24+ TGCCTTCAACCTTGCAACAACCTCAACTCTTCGATCCACCATTTCTTGTG
JMSF048E01+ TGCCTTCAACCTTGCAACAACCTCAACTCTTCGATCCACCATTTCTTGTGGGACATCTTC
JMFF011J13+ TGCCTTCAACCTTGCAACAACCTCAACTCTTCGATCCACCATTTCTTGTGGGACATCTTC
JMFF034L22+ TGCCTTCAACCTTGCAACAACCTCAACTCTTCGATCCACCATTTCTTGTGGGACATCTTC
JMFF003B11+ TGCCTTCAACCTTGCAACAACCTCAACTCTTCGATCCACCATTTCTTGTGGGACATCTTC
                      ____________________________________________________________
consensus TGCCTTCAACCTTGCAACAACCTCAACTCTTCGATCCACCATTTCTTGTGGGACATCTTC
 
. : . : . : . : . : . :
JMSF030O21+ AGTGTGATAGAGGGATTTGTGTATGTCCATAGCATAATCAACCATGTTGGTATCGTTGAG
JMSF035A06+ AGTGTGATAGAGGGATTTGTGTATGTCCATAGCATAATCAACCATGTTGGTATCGTTGAG
JMSF033G15+ AGTGTGATAGAGGGATTTGTGTATGTCCATAGCATAATCAACC
JMSF048E01+ AGTGTGATAGAGGGATTTGTGTATGTCCATAGCATAATCAACCATGTTGGTATCGTTGAG
JMFF011J13+ AGTGTGATAGAGGGATTTGTGTATGTCCATAGCATAATCAACCATGTTGGTATCGTTGAG
JMFF034L22+ AGTGTGATAGAGGGATTTGTGTATGTCCATAGCATAATCAACCATGTTGGTATCGTTGAG
JMFF003B11+ AGTGTGATAGAGGGATTTGTGTATGTCCATAGCATAATCAACCATGTTGGTATCGTTGAG
                      ____________________________________________________________
consensus AGTGTGATAGAGGGATTTGTGTATGTCCATAGCATAATCAACCATGTTGGTATCGTTGAG
 
. : . : . : . : . : . :
JMSF030O21+ GAGCTCAATCTTAGCCTTGAGAATATCCTCATCGGCGTAGAGTTGACGCTCTTGCAGGAA
JMSF035A06+ GAGCTCAATCTTAGCCTTGAGAATATCCTCATCGGCGTAGAGTTGACGCTCTTGCAGGAA
JMSF048E01+ GAGCTCAATCTTAGCCTTGAGAATATCCTCATCGGCGTAGAGTTGACGCTCTTGCAGGAA
JMFF011J13+ GAGCTCAATCTTAGCCTTGAGAATATCCTCATCGGCGTAGAGTTGACGCTCTTGCAGGAA
JMFF034L22+ GAGCTCAATCTTAGCCTTGAGAATATCCTCATCGGCGTAGAGTTGACGCTCTTGCAGGAA
JMFF003B11+ GAGCTCAATCTTAGCCTTGAGAATATCCTCATCGGCGTAGAGTTGACGCTCTTGCAGGAA
                      ____________________________________________________________
consensus GAGCTCAATCTTAGCCTTGAGAATATCCTCATCGGCGTAGAGTTGACGCTCTTGCAGGAA
 
. : . : . : . : . : . :
JMSF030O21+ TTCCAGCAAGGGGAACACCAGGTGCCGATCGAGTTGCGGAGCTATGCGCGGCGTCAGATC
JMSF035A06+ TTCCAGCAAGGGGAACACCAGGTGCCGATCGAGTTGCGGAGCTATGCGCGGCGTCAGATC
JMSF048E01+ TTCCAGCAAGGGGAACACCAGGTGCCGATCGAGTTGCGGAGCTATGCGCGGCGTCAGATC
JMFF011J13+ TTCCAGCAAGGGGAACACCAGGTGCCGATCGAGTTGCGGAGCTATGCGCGGCGTCAGATC
JMFF034L22+ TTCCAGCAAGGGGAACACCAGGTGCCGATCGAGTTGCGGAGCTATGCGCGGCGTCAGATC
JMFF003B11+ TTCCAGCAAGGGGAACACCAGGTGCCGATCGAGTTGCGGAGCTATGCGCGGCGTCAGATC
                      ____________________________________________________________
consensus TTCCAGCAAGGGGAACACCAGGTGCCGATCGAGTTGCGGAGCTATGCGCGGCGTCAGATC
 
. : . : . : . : . : . :
JMSF030O21+ ATACTTCGCCGCCATACTTGCGCTCTGGAGATTGGCAGTTC
JMSF035A06+ ATACTTCGCCGCCATACTTGCGCTCTGGAGATTGGCAGT
JMSF048E01+ ATACTTCGCCGCCATACTTGCGCTCTGGAGATTGGCAGTTC
JMFF011J13+ ATACTTCGCCGCCATACTTGCGCTCTGGAGATTGGCAGTTCAGCTTTAGCGTTCAAGGAT
JMFF034L22+ ATACTTCGCCGCCATACTTGCGCTCTGGAGATTGGCAGTTCAGCTTTAGCGTTCAAGGAT
JMFF003B11+ ATACTTCGCCGCCATACTTGCGCTCTGGAGATTGGCAGTTCAGCTTTAGCGTTCAAGGAT
                      ____________________________________________________________
consensus ATACTTCGCCGCCATACTTGCGCTCTGGAGATTGGCAGTTCAGCTTTAGCGTTCAAGGAT