Contig 007280:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFF024K18+                                                          GAACTAGAGATCT
                      ____________________________________________________________
consensus                                                            GAACTAGAGATCT
 
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JMFF024K18+           AAAGCTTTGGTTCAACAAGGCAATTGAGCCATAATCTGACCTTGGACAGTGAAGTAGGCA
                      ____________________________________________________________
consensus             AAAGCTTTGGTTCAACAAGGCAATTGAGCCATAATCTGACCTTGGACAGTGAAGTAGGCA
 
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JMFF024K18+           ATTTACTGAAAGGTCTCGGCCAATTTGATGGATTAGATCGTTTCTATCAGAATGATTTGC
                      ____________________________________________________________
consensus             ATTTACTGAAAGGTCTCGGCCAATTTGATGGATTAGATCGTTTCTATCAGAATGATTTGC
 
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JMFF024K18+           ATCTTCTTGTCCATTACTAGTTAGCTCTCGTTGCGACAATGAAAGATCATGAAAACCCTG
                      ____________________________________________________________
consensus             ATCTTCTTGTCCATTACTAGTTAGCTCTCGTTGCGACAATGAAAGATCATGAAAACCCTG
 
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JMFF024K18+           CACCGTTTCCTCTTTCTCTAGGCAATCAGCCAGCTTCAAGGACTTCCTCAGTGCAATGTC
                      ____________________________________________________________
consensus             CACCGTTTCCTCTTTCTCTAGGCAATCAGCCAGCTTCAAGGACTTCCTCAGTGCAATGTC
 
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JMFF024K18+           TTCTTCCTCTTCCAAACGGCGTTTCTCCTTTGAATTTTCTATGACAAGGGAAGCAGTATA
                      ____________________________________________________________
consensus             TTCTTCCTCTTCCAAACGGCGTTTCTCCTTTGAATTTTCTATGACAAGGGAAGCAGTATA
 
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JMFF024K18+           AACCCATGTGCTCTCTTGCTCACAGGCTCTAGGCAGGTCTCGAGATACAAGATATGATGG
                      ____________________________________________________________
consensus             AACCCATGTGCTCTCTTGCTCACAGGCTCTAGGCAGGTCTCGAGATACAAGATATGATGG
 
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JMFF024K18+           ACCCTCCAACATGGTGGCAAACTAGCAAAGTCACTTGCTATAATGCCTCATTGGAAGCAG
JMFF003B05+                               ACTAGCAAAGTCACTNGCTATAATGCCTCANTGGAAGCAG
                      ____________________________________________________________
consensus             ACCCTCCAACATGGTGGCAAACTAGCAAAGTCACTTGCTATAATGCCTCATTGGAAGCAG
 
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JMFF024K18+           GAAGAAAGAACTCAGCTCTTGTGAGGTTGTTGAAGGAGCAGCCTTTGGTTGAAATTATCA
JMFF003B05+           AAAGAAAGANCTCAGCTCTTGTGAGGTTGTTGAAGGAGCANCCNNTGGTNGAAATTATCA
                      ____________________________________________________________
consensus             GAAGAAAGAACTCAGCTCTTGTGAGGTTGTTGAAGGAGCAGCCTTTGGTTGAAATTATCA
 
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JMFF024K18+           CC                                                          
JMFF003B05+           CCNTTATTTATGGGAATAGGAACACATATGCATATNTATACACANGAAAACACTGCAAAA
                      ____________________________________________________________
consensus             CCNTTATTTATGGGAATAGGAACACATATGCATATNTATACACANGAAAACACTGCAAAA
 
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JMFF006E08+                                    TTTCGATTTTAACTTATCACTTTTGANTACTACTC
JMFF003B05+           GTGAGTGTCCNTCANGTNTGGCCANTTTCGATTTTAACTTATCACTTTTGANTACTACTC
                      ____________________________________________________________
consensus             GTGAGTGTCCNTCANGTNTGGCCANTTTCGATTTTAACTTATCACTTTTGANTACTACTC
 
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JMFF006E08+           TCAAATTCCAGAGAAGATAGCTCTCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTAA
JMFF003B05+           TCAAATTCCAGAGAAGANAGCTCTCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTAA
                      ____________________________________________________________
consensus             TCAAATTCCAGAGAAGATAGCTCTCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTAA
 
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JMFF006E08+           GTGTTTATAT                                                  
JMFF003B05+           GTGTTTATATTTCTGGTTCTATCTCTCTTACTGTGGTGTTTTTCTTGTGTATGAAATGGA
                      ____________________________________________________________
consensus             GTGTTTATATTTCTGGTTCTATCTCTCTTACTGTGGTGTTTTTCTTGTGTATGAAATGGA