Contig 007275:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF002J01Sequence159007275 (11)519022283ref|XP_009624257.1|5e-05PREDICTED: transcriptional corepressor LEUNIG isoform X1 [Nicotiana tomentosifo
JMFS036E01Sequence492007275 (11)ref|XP_006382069.1|5e-47hypothetical protein POPTR_0006s26420g [Populus trichocarpa] gb|ERP59866.1| hypo
JMFS038C12Sequence627007275 (11)ref|XP_006382069.1|1e-50hypothetical protein POPTR_0006s26420g [Populus trichocarpa] gb|ERP59866.1| hypo
JMFS042A07Sequence627007275 (11)ref|XP_006382069.1|3e-50hypothetical protein POPTR_0006s26420g [Populus trichocarpa] gb|ERP59866.1| hypo
JMFS074E07Sequence627007275 (11)ref|XP_006382069.1|2e-50hypothetical protein POPTR_0006s26420g [Populus trichocarpa] gb|ERP59866.1| hypo
JMFS077G03Sequence624007275 (11)ref|XP_006382069.1|2e-50hypothetical protein POPTR_0006s26420g [Populus trichocarpa] gb|ERP59866.1| hypo
JMFS138C03Sequence582007275 (11)emb|CBI20986.3|9e-48unnamed protein product [Vitis vinifera]
JMFS140F11Sequence626007275 (11)ref|XP_006382069.1|1e-49hypothetical protein POPTR_0006s26420g [Populus trichocarpa] gb|ERP59866.1| hypo
JMFS151B01Sequence579007275 (11)emb|CBI20986.3|8e-48unnamed protein product [Vitis vinifera]
JMFS164C07Sequence607007275 (11)ref|XP_006382069.1|1e-50hypothetical protein POPTR_0006s26420g [Populus trichocarpa] gb|ERP59866.1| hypo
JMSF046B07Sequence779007275 (11)emb|CAF18245.1|3e-66STYLOSA protein [Antirrhinum majus]652016196ref|XP_009787198.1|2e-84PREDICTED: transcriptional corepressor LEUNIG isoform X3 [Nicotiana sylvestris]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF046B07+ CATAGAAGCATCAT
                      ____________________________________________________________
consensus CATAGAAGCATCAT
 
. : . : . : . : . : . :
JMFS038C12+ GGTAGTTTCAATCTTTCNTCGTACGCTTTTGCAGACAATG
JMSF046B07+ CTGAAGAATCTCTTTGAACAGGTAGTTTCAATCTTTCCTCGTACGCTTTTGCAGACAATG
                      ____________________________________________________________
consensus CTGAAGAATCTCTTTGAACAGGTAGTTTCAATCTTTCCTCGTACGCTTTTGCAGACAATG
 
. : . : . : . : . : . :
JMFS038C12+ CATNTGCACCAGGATTCTGCCTAATAAGAGAATCATTTCCTACAACCCCATTGACTGTGC
JMSF046B07+ CATTTGCACCAGGATTCTGCCTAATAAGAGAATCATTTCCTACAACCCCATTGACTGTGC
                      ____________________________________________________________
consensus CATTTGCACCAGGATTCTGCCTAATAAGAGAATCATTTCCTACAACCCCATTGACTGTGC
 
. : . : . : . : . : . :
JMFS038C12+ CATTCAATAGGTTGCTGCCATCTCTCCGTTGTTGTGTATGTTGTTGTTGGTGGTGCTGTT
JMSF046B07+ CATTCAATAGGTTGCTGCCATCTCTCCGTTGTTGTGTATGTTGTTGTTGGTGGTGCTGTT
                      ____________________________________________________________
consensus CATTCAATAGGTTGCTGCCATCTCTCCGTTGTTGTGTATGTTGTTGTTGGTGGTGCTGTT
 
. : . : . : . : . : . :
JMFS038C12+ GCTGTTGCTGTTGTTGAGCTTGCCTCTGCAACAGGAGCTGCTGCATCTGTAATTGCTGCT
JMSF046B07+ GCTGTTGCTGTTGTTGAGCTTGCCTCTGCAACAGGAGCTGCTGCATCTGTAATTGCTGCT
                      ____________________________________________________________
consensus GCTGTTGCTGTTGTTGAGCTTGCCTCTGCAACAGGAGCTGCTGCATCTGTAATTGCTGCT
 
. : . : . : . : . : . :
JMFS038C12+ GGTGCTGCTGCTGTTGCTGCTGTTGTTGCTGCTGTTGTTGCTGCTGCTGAGGATGCTGCG
JMSF046B07+ GGTGCTGCTGCTGTTGCTGCTGTTGTTGCTGCTGTTGTTGCTGCTGCTGAGGATGCTGCG
                      ____________________________________________________________
consensus GGTGCTGCTGCTGTTGCTGCTGTTGTTGCTGCTGTTGTTGCTGCTGCTGAGGATGCTGCG
 
. : . : . : . : . : . :
JMFS038C12+ GTTGTTGGGATTGCTGTTGTTGCTGTTGCTGTTGCTGCTGCTCCCCCCTTACTTTCATCA
JMSF046B07+ GTTGTTGGGATTGCTGTTGTTGCTGTTGCTGTTGCTGCTGCTCCCCCCTTACTTTCATCA
JMFS077G03+ ATTGCTGTTGTTGCTGTTGCTGTTGCTGCTGCTCCCCCCTTACTTTCATCA
JMFS140F11+ ATTGCTGTTGTTGCTGTTGCTGTTGCTGCTGCTCCCCCCTTATTTTCATCA
JMFS164C07+ TGCTGCTGCTCCCCCCTTACTTTCATCA
JMFS074E07+ TGTTGTTGCTGTTGCTGTTGCTGCTGCTCCCCCCTTACTTTCATCA
JMFS042A07+ TGTTGTTGCTGTTGCTGTTGCTGCTGCTCCCCCCTTACTTTCATCA
                      ____________________________________________________________
consensus GTTGTTGGGATTGCTGTTGTTGCTGTTGCTGTTGCTGCTGCTCCCCCCTTACTTTCATCA
 
. : . : . : . : . : . :
JMFS038C12+ ACTGAGTCTCAATGTAGGATGCAGCAACATCAGAGTGCTTGTCATTGGTCCGGGCAATGA
JMSF046B07+ ACTGAGTCTCAATGTAGGATGCAGCAACATCAGAGTGCTTGTCATTGGTCCGGGCAATGA
JMFS036E01+ AGTCTCAATGTAGGATGCAACAACATCAGAGTGCTTGTCATTGGTCCGGGCAATGA
JMFS077G03+ ACTGAGTCTCAATGTAGGATGCAGCAACATCAGAGTGCTTGTCATTGGTCCGGGCAATGA
JMFS140F11+ ACTGAGTCTCAATGTAGGATGCAGCAACATCAGAGTGCTGGTCATTGGTCCGGGCAATGA
JMFS164C07+ ACTGAGTCTCAATGTAGGATGCAGCAACATCAGAGTGCTTGTCATTGGTCCGGGCAATGA
JMFS074E07+ ACTGAGTCTCAATGTAGGATGCAGCAACATCAGAGTGCTTGTCATTGGTCCGGGCAATGA
JMFS042A07+ ACTGAGTCTCAATGTAGGATGCAGCAACATCAGAGTGCTTGTCATTGGTCCGGGCAATGA
JMFS151B01+ CAATGTAGGATGCAGCAACATCAGAGTGCTTGTCATTGGTCCGGGCAATGA
JMFS138C03+ CAATGTAGGATGCAGCAACATCAGAGTGCTTGTCATTGGTCCGGGCAATGA
                      ____________________________________________________________
consensus ACTGAGTCTCAATGTAGGATGCAGCAACATCAGAGTGCTTGTCATTGGTCCGGGCAATGA
 
. : . : . : . : . : . :
JMFS038C12+ ATATATCCCAAAATACCGACCACCATTCAAAAAGAAAACCGCCAGGAGCATCAATAGCAA
JMSF046B07+ ATATATCCCAAAATACCGACCACCATTCAAAAAGAAAACCGCCAGGAGCATCAATAGCAA
JMFS036E01+ ATATATCCCAAAATACCGGCCACCATTCGAAAAGAAAACCGCCAGGAGCATCAATAGCAA
JMFS077G03+ ATATATCCCAAAATACCGACCACCATTCAAAAAGAAAACCGCCAGGAGCATCAATAGCAA
JMFS140F11+ ATATATCCCAAAATACCGACCACCATTCAAAAAGAAAACCGCCAGGAGCATCAATAGCAA
JMFS164C07+ ATATATCCCAAAATACCGACCACCATTCAAAAAGAAAACCGCCAGGAGCATCAATAGCAA
JMFS074E07+ ATATATCCCAAAATACCGACCACCATTCAAAAAGAAAACCGCCAGGAGCATCAATAGCAA
JMFS042A07+ ATATATCCCAAAATACCGACCACCATTCAAAAAGAAAACCGCCAGGAGCATCAATAGCAA
JMFS151B01+ ATATATCCCAAAATACCGACCACCATTCAAAAAGAAAACCGCCAGGAGCATCAATAGCAA
JMFS138C03+ ATATATCCCAAAATACCGACCACCATTCAAAAAGAAAACCGCCAGGAGCATCAATAGCAA
                      ____________________________________________________________
consensus ATATATCCCAAAATACCGACCACCATTCAAAAAGAAAACCGCCAGGAGCATCAATAGCAA
 
. : . : . : . : . : . :
JMFS038C12+ CAGGGTCAGATGAAACTTTCCCTTCAGCTTGAAAAGCCTGAGCAGAAGCCTTTAAATCCC
JMSF046B07+ CAGGGTCAGATGAAACTTTCCCTTCAGCTTGAAAAGCCTGAGCAGAAGCCTTTAAATCCC
JMFS036E01+ CAGGGTCAGATGAAACTTTCCCTTCAGCTTGAAAAGCCTGAGCAAGAGCCTTTAAATCCC
JMFS077G03+ CAGGGTCAGATGAAACTTTCCCTTCAGCTTGAAAAGCCTGAGCAGAAGCCTTTAAATCCC
JMFS140F11+ CAGGGTCAGATGAAACTTTCCCTTCAGCTTGAAAAGCCTGAGCAGAAGCCTTTAAATCCC
JMFS164C07+ CAGGGTCAGATGAAACTTTCCCTTCAGCTTGAAAAGCCTGAGCAGAAGCCTTTAAATCCC
JMFS074E07+ CAGGGTCAGATGAAACTTTCCCTTCAGCTTGAAAAGCCTGAGCAGAAGCCTTTAAATCCC
JMFS042A07+ CAGGGTCAGATGAAACTTTCCCTTCAGCTTGAAAAGCCTGAGCAGAAGCCTTTAAATCCC
JMFS151B01+ CAGGGTCAGATGAAACTTTCCCTTCAGCTTGAAAAGCCTGAGCAGAAGCCTTTAAATCCC
JMFS138C03+ CAGGGTCAGATGAAACTTTCCCTTCAGCTTGAAAAGCCTGAGCAGAAGCCTTTAAATCCC
                      ____________________________________________________________
consensus CAGGGTCAGATGAAACTTTCCCTTCAGCTTGAAAAGCCTGAGCAGAAGCCTTTAAATCCC
 
. : . : . : . : . : . :
JMFS038C12+ TCTTCACCAAATAATCATGAATATAAACATCTAGCATTTTATCAGCTTCCCAGTTGGTCT
JMSF046B07+ TCTTCACCAAATAATCATGAATATAAACATCTAGCATTTTATCAGCTTCCCAGTTGGTCT
JMFS036E01+ TCTTCACCAAATAATCATGAATATAAACATCTAGCATTTTATCAGCTTCCCAGTTGGTAT
JMFS077G03+ TCTTCACCAAATAATCATGAATATAAACATCTAGCATTTTATCAGCTTCCCAGTTGGTCT
JMFS140F11+ TCTTCACCAAATAATCATGAATATAAACATCTAGCATTTTATCAGCTTCCCAGTTGGTCT
JMFS164C07+ TCTTCACCAAATAATCATGAATATAAACATCTAGCATTTTATCAGCTTCCCAGTTGGTCT
JMFS074E07+ TCTTCACCAAATAATCATGAATATAAACATCTAGCATTTTATCAGCTTCCCAGTTGGTCT
JMFS042A07+ TCTTCACCAAATAATCATGAATATAAACATCTAGCATTTTATCAGCTTCCCAGTTGGTCT
JMFS151B01+ TCTTCACCAAATAATCATGAATATAAACATCTAGCATTTTATCAGCTTCCCAGTTGGTCT
JMFS138C03+ TCTTCACCAAATAATCATGAATATAAACATCTAGCATTTTATCAGCTTCCCAGTTGGTCT
                      ____________________________________________________________
consensus TCTTCACCAAATAATCATGAATATAAACATCTAGCATTTTATCAGCTTCCCAGTTGGTCT
 
. : . : . : . : . : . :
JMFS038C12+ GAGACATGTTTGCTCAATCCAATTCACCCCAACCAAACAATCCCTAC
JMSF046B07+ GAGACATGTTTGCTCAATCCAATTCACCCCAACCAAACAATCCCTACTACTGTCGGATAA
JMFS036E01+ GAGACATGTTTGCTCAATCCAATTCACCCCAACCAAACAATCCCTACTACTGTCGGATAA
JMFS077G03+ GAGACATGTTTGCTCAATCCAATTCACCCCAACCAAACAATCCCTACTACTGTCGGATAA
JMFS140F11+ GAGACATGTTTGCTCAATCCAATTCACCCCAACCAAACAATCCCTACTACTGTCGGATAA
JMFS164C07+ GAGACATGTTTGCTCAATCCAATTCACCCCAACCAAACAATCCCTACTACTGTCGGATAA
JMFS074E07+ GAGACATGTTTGCTCAATCCAATTCACCCCAACCAAACAATCCCTACTACTGTCGGATAA
JMFS042A07+ GAGACATGTTTGCTCAATCCAATTCACCCCAACCAAACAATCCCTACTACTGTCGGATAA
JMFS151B01+ GAGACATGTTTGCTCAATCCAATTCACCCCAACCAAACAATCCCTACTACTGTCGGATAA
JMFS138C03+ GAGACATGTTTGCTCAATCCAATTCACCCCAACCAAACAATCCCTACTACTGTAGGATAA
                      ____________________________________________________________
consensus GAGACATGTTTGCTCAATCCAATTCACCCCAACCAAACAATCCCTACTACTGTCGGATAA
 
. : . : . : . : . : . :
JMSF046B07+ AGCTATCAGCTCCTTTTTCTCTTCTGCTTTTACTTCTTCTTCTTCAGTTGCTTTCTCCCA
JMFS036E01+ AGCTATCAGCTCCTTTTTCTCTTCTGCTTTAACTTATTATTCTTCAGTTGCTTTCTCCCA
JMFS077G03+ AGCTATCAGCTCCTTTTTCTCTTCTGCTTTTACTTCTTCTTCTTCAGTTGCTTTCTCCCA
JMFS140F11+ AGCTATCAGCTCCTTTTTCTCTTCTGCTTTTACTTCTTCTTCTTCAGTTGCTTTCTCCCA
JMFS164C07+ AGCTATCAGCTCCTTTTTCTCTTCTGCTTTTACTTCTTCTTCTTCAGTTGCTTTCTCCCA
JMFS074E07+ AGCTATCAGCTCCTTTTTCTCTTCTGCTTTTACTTCTTCTTCTTCAGTTGCTTTCTCCCA
JMFS042A07+ AGCTATCAGCTCCTTTTTCTCTTCTGCTTTTACTTCTTCTTCTTCAGTTGCTTTCTCCCA
JMFS151B01+ AGCTATCAGCTCCTTTTTCTCTTCTGCTTTTACTTCTTCTTCTTCAGTTGCTTTCTCCCA
JMFS138C03+ AGCTATCAGCTCCTTTTTCTCTTCTGCTTTTACTTCTTCTTCTTCAGTTGCTTTCTCCCA
                      ____________________________________________________________
consensus AGCTATCAGCTCCTTTTTCTCTTCTGCTTTTACTTCTTCTTCTTCAGTTGCTTTCTCCCA
 
. : . : . : . : . : . :
JMSF046B07+ CAGCCAATTTGCTTATTAATTGGATAACCAAAAAACAAAACCC
JMFS036E01+ CAGCCAATTTG
JMFS077G03+ CAGCCAATTTGCTTATTAATTGGATAACCAAAAAACAAAACCCAAATTTACACCGCCAGA
JMFS140F11+ CAGCCAATTTGCTTATTAATTGGATAACCAAAAAACAAAACCCAAATTTACACCGCCAGA
JMFS164C07+ CAGCCAATTTGCTTATTAATTGGATAACCAAAAAACAAAACCCAAATTTACACCGCCAGA
JMFS074E07+ CAGCCAATTTGCTTATTAATTGGATAACCAAAAAACAAAACCCAAATTTACACCGCCAGA
JMFS042A07+ CAGCCAATTTGCTTATTAATTGGATAACCAAAAAACAAAACCCAAATTTACACCGCCAGA
JMFS151B01+ CAGCCAATTTGCTTATTAATTGGATAACCAAAAAACAAAACCCAAATTTACACCGCCAGA
JMFS138C03+ CAGCCAATTTGCTTATTAATTGGATAACCAAAAAACAAAACCCAAATTTACACCGCCAGA
                      ____________________________________________________________
consensus CAGCCAATTTGCTTATTAATTGGATAACCAAAAAACAAAACCCAAATTTACACCGCCAGA
 
. : . : . : . : . : . :
JMFS077G03+ AAGAAAGTACAAATTCAAG--XXXXXXXXXXXXXXXXXXXXCGAAAATCAAAGAAAAAGA
JMFS140F11+ AAGAAAGTACAAATTCAAG-XXXXXXXXXXXXXXXXXXXXXCGAAAATCAAAGAAAAAGA
JMFS164C07+ AAGAAAGTACAAATTCAAGXXXXXXXXXXXXXXXXXXXXXXCGAAAATCAAAGAAAAAGA
JMFS074E07+ AAGAAAGTACAAATTCAAG--XXXXXXXXXXXXXXXXXXXXCGAAAATCAAAGAAAAAGA
JMFS042A07+ AAGAAAGTACAAATTCAAG---AAAAAAAAAAAAAAAAAAACGAAAATCAAAGAAAAAGA
JMFS151B01+ AAGAAAGTACAAATTCAAG-XXXXXXXXXXXXXXXXXXXXXCGAAAATCAAAGAAAAAGA
JMFS138C03+ AAGAAAGTACAAATTCAAG-XXXXXXXXXXXXXXXXXXXXXCGAAAATCAAAGAAAAAGA
JMFF002J01+ CGAAAATCAAAGAAAAAGA
                      ____________________________________________________________
consensus AAGAAAGTACAAATTCAAG-NNAAAAAAAAAAAAAAAAAAACGAAAATCAAAGAAAAAGA
 
. : . : . : . : . : . :
JMFS077G03+ GACCAACTTCTCTTTTCTTTAATATTTATATTTTAGGGTTTTTTGTATTTTCCAATGTGT
JMFS140F11+ GACCAACTTCTCTTTTCTTTAATATTTATATTTTAGGGTTTTTTGTATTTTCCAATGTGT
JMFS164C07+ GACCAACTTCTCTTTTCTTTAATATTTATATTTTAGGGTTTTTTGTATTTTCCAATGTGT
JMFS074E07+ GACCAACTTCTCTTTTCTTTAATATTTATATTTTAGGGTTTTTTGTATTTTCCAATGTGT
JMFS042A07+ GACCAACTTCTCTTTTCTTTAATATTTATATTTTAGGGTTTTTTGTATTTTCCAATGTGT
JMFS151B01+ GACCAACTTCTCTTTTCTTTAATATTTATATTTTAGGGTTTTTTGTATTTTCCAATGTGT
JMFS138C03+ GACCAACTTCTCTTTTCTTTAATATTTATATTTTAGGGTTTTTTGTATTTTCCAATGTGT
JMFF002J01+ GACCAACTTCTCTTTTCTTTAATATTTATATTTTAGGGTTTTTTGTATTTTCCAATGTGT
                      ____________________________________________________________
consensus GACCAACTTCTCTTTTCTTTAATATTTATATTTTAGGGTTTTTTGTATTTTCCAATGTGT
 
. : . : . : . : . : . :
JMFS077G03+ TTTTCATGGAAGTTCAATTTGCTTCCTCTCTT
JMFS140F11+ TTTTCATGGAAGTTCAATTTGCTTCCTCTCTTTATT
JMFS164C07+ TTTTCATGGAAGTTCAATTTGCTTCCTCTCTTTATTTTC
JMFS074E07+ TTTTCATGGAAGTTCAATTTGCTTCCTCTCTTTATTTTCTGCT
JMFS042A07+ TTTTCATGGAAGTTCAATTTGCTTCCTCTCTTTATTTTCTGCT
JMFS151B01+ TTTTCATGGAAGTTCAATTTGCTTCCTCTCTTTATTTTCTGCT
JMFS138C03+ TTTTCATGGAAGTTCAATTTGCTTCCTCTCTTTATTTTCTGCTGCACAT
JMFF002J01+ TTTTCATGGAAGTTCAATTTGCTTCCTCTCTTTATTTTCTGCTGCACATTGTGGACGGTG
                      ____________________________________________________________
consensus TTTTCATGGAAGTTCAATTTGCTTCCTCTCTTTATTTTCTGCTGCACATTGTGGACGGTG