Contig 007271:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF001H22Sequence534007271 (9)ref|XP_004953107.1|2e-06PREDICTED: uncharacterized protein At4g06744-like [Setaria italica]783003929 (9)ref|XP_006360245.1|8e-17PREDICTED: uncharacterized protein At4g06744-like, partial [Solanum tuberosum]
JMSF008N24Sequence350007271 (9)730003929 (9)ref|XP_006360245.1|4e-25PREDICTED: uncharacterized protein At4g06744-like, partial [Solanum tuberosum]
JMSF017F04Sequence243007271 (9)709003929 (9)ref|XP_006360245.1|2e-38PREDICTED: uncharacterized protein At4g06744-like, partial [Solanum tuberosum]
JMSF017N19Sequence520007271 (9)ref|XP_009588943.1|4e-10PREDICTED: uncharacterized protein At4g06744-like [Nicotiana tomentosiformis]715003929 (9)ref|XP_006360245.1|1e-54PREDICTED: uncharacterized protein At4g06744-like, partial [Solanum tuberosum]
JMSF036O16Sequence677007271 (9)ref|XP_009588943.1|6e-34PREDICTED: uncharacterized protein At4g06744-like [Nicotiana tomentosiformis]709003929 (9)ref|XP_006360245.1|4e-51PREDICTED: uncharacterized protein At4g06744-like, partial [Solanum tuberosum]
JMSF037C16Sequence673007271 (9)ref|XP_009588943.1|5e-34PREDICTED: uncharacterized protein At4g06744-like [Nicotiana tomentosiformis]695003929 (9)ref|XP_006360245.1|6e-52PREDICTED: uncharacterized protein At4g06744-like, partial [Solanum tuberosum]
JMSF042F11Sequence780007271 (9)ref|XP_009588943.1|2e-38PREDICTED: uncharacterized protein At4g06744-like [Nicotiana tomentosiformis]753003929 (9)ref|XP_006360245.1|8e-57PREDICTED: uncharacterized protein At4g06744-like, partial [Solanum tuberosum]
JMSF044I16Sequence746007271 (9)ref|XP_009588943.1|6e-36PREDICTED: uncharacterized protein At4g06744-like [Nicotiana tomentosiformis]698003929 (9)ref|XP_006360245.1|6e-52PREDICTED: uncharacterized protein At4g06744-like, partial [Solanum tuberosum]
JMSF046P03Sequence720007271 (9)ref|XP_009588943.1|7e-43PREDICTED: uncharacterized protein At4g06744-like [Nicotiana tomentosiformis]681003929 (9)ref|XP_006360245.1|1e-52PREDICTED: uncharacterized protein At4g06744-like, partial [Solanum tuberosum]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF042F11+ AGGTGAGGAAGAAAACCGGCGTGGATCCGAGG
                      ____________________________________________________________
consensus AGGTGAGGAAGAAAACCGGCGTGGATCCGAGG
 
. : . : . : . : . : . :
JMSF042F11+ TTGTCGGGGAGCGGGCCGGAGAAGAAATTGTTGTTGAGGAACAGAGCGTCGAGGTCTAAC
JMSF044I16+ CGGGGAGCGGGCCGGAGAAGAAATTGTTGTTGAGGAACAGAGCGTCGAGGTCTAAC
JMSF046P03+ TTGTTGAGGAACAGAGCGTCGAGGTCTAAC
                      ____________________________________________________________
consensus TTGTCGGGGAGCGGGCCGGAGAAGAAATTGTTGTTGAGGAACAGAGCGTCGAGGTCTAAC
 
. : . : . : . : . : . :
JMSF042F11+ GTGAAAACCTGCGGGTGGACCGGGCCGGTCAGCATGTTGAACCGGAGATCCAAATACGTT
JMSF044I16+ GTGAAAACCTGCGGGTGGACCGGGCCGGTCAGCATGTTGAACCGGAGATCCAAATACGTT
JMSF036O16+ GGTGGACCGGGCCGGTCAGCATGTTGAACCGGAGATCCAAATACGTT
JMSF046P03+ GTGAAAACCTGCGGGTGGACCGGGCCGGTCAGCATGTTGAACCGGAGATCCAAATACGTT
JMSF037C16+ GACCGGGCCGGTCAGCATGTTGAACCGGAGATCCAAATACGTT
                      ____________________________________________________________
consensus GTGAAAACCTGCGGGTGGACCGGGCCGGTCAGCATGTTGAACCGGAGATCCAAATACGTT
 
. : . : . : . : . : . :
JMSF042F11+ AAGTTGGTGGCTTCAAGGACGGCGGTGGGGAACGCGCCGGCGAGCTTGTTGTTGCTGAGG
JMSF044I16+ AAGTTGGTGGCTTCAAGGACGGCGGTGGGGAACGCGCCGGCGAGCTTGTTGTTGCTGAGG
JMSF036O16+ AAGTTGGTGGCTTCAAGGACGGCGGTGGGGAACGCGCCGGCGAGCTTGTTGTTGCTGAGG
JMSF046P03+ AAGTTGGTGGCTTCAAGGACGGCGGTGGGGAACGCGCCGGCGAGCTTGTTGTTGCTGAGG
JMSF037C16+ AAGTTGGTGGCTTCAAGGACGGCGGTGGGGAACGCGCCGGCGAGCTTGTTGTTGCTGAGG
                      ____________________________________________________________
consensus AAGTTGGTGGCTTCAAGGACGGCGGTGGGGAACGCGCCGGCGAGCTTGTTGTTGCTGAGG
 
. : . : . : . : . : . :
JMSF042F11+ TCAAGCTCGAAGAGCGTGGGGAATTTCTGGACGGGGATTCCCGGAGCTCCGGTGAAGTTA
JMSF044I16+ TCAAGCTCGAAGAGCGTGGGGAATTTCTGGACGGGGATTCCCGGAGCTCCGGTGAAGTTA
JMSF036O16+ TCAAGCTCGAAGAGCGTGGGGAATTTCTGGACGGGGATTCCCGGAGCTCCGGTGAAGTTA
JMSF046P03+ TCAAGCTCGAAGAGCGTGGGGAATTTCTGGACGGGGATTCCCGGAGCTCCGGTGAAGTTA
JMSF017N19+ GGTGAAGTTA
JMSF037C16+ TCAAGCTCGAAGAGCGTGGGGAATTTCTGGACGGGGATTCCCGGAGCTCCGGTGAAGTTA
                      ____________________________________________________________
consensus TCAAGCTCGAAGAGCGTGGGGAATTTCTGGACGGGGATTCCCGGAGCTCCGGTGAAGTTA
 
. : . : . : . : . : . :
JMSF042F11+ TTGGAATTCACGTGGATGACGACCAAGTCGTTGAAGGATTCCACGAAGCTGTTAAGCGAC
JMSF044I16+ TTGGAATTCACGTGGATGACGACCAAGTCGTTGAAGGATTCCACGAAGCTGTTAAGCGAC
JMSF036O16+ TTGGAATTCACGTGGATGACGACCAAGTCGTTGAAGGATTCCACGAAGCTGTTAAGCGAC
JMSF046P03+ TTGGAATTCACGTGGATGACGACCAAGTCGTTGAAGGATTCCACGAAGCTGTTAAGCGAC
JMSF017N19+ TTGGAATTCACGTGGATGACGACCAAGTCGTTGAAGGATTCCACGAAGCTGTTAAGCGAC
JMSF037C16+ TTGGAATTCACGTGGATGACGACCAAGTCGTTGAAGGATTCCACGAAGCTGTTAAGCGAC
JMFF001H22+ TTCACGTGGATGACGACCAAGTCGTTGAAGGATTCCACGAAGCTGTTAAGCGAC
                      ____________________________________________________________
consensus TTGGAATTCACGTGGATGACGACCAAGTCGTTGAAGGATTCCACGAAGCTGTTAAGCGAC
 
. : . : . : . : . : . :
JMSF042F11+ AGGCCGTTACCGTTGAAGTTGTAGCCGTTGAAGTAAATCCCACCGACCCTTTTCTTGTCG
JMSF044I16+ AGGCCGTTACCGTTGAAGTTGTAGCCGTTGAAGTAAATCCCACCGACCCTTTTCTTGTCG
JMSF036O16+ AGGCCGTTACCGTTGAAGTTGTAGCCGTTGAAGTAAATCCCACCGACCCTTTTCTTGTCG
JMSF046P03+ AGGCCGTTACCGTTGAAGTNGTAGCCGTTGAAGTAAATCCCACCGACCCTTTTCTTGTCG
JMSF017N19+ AGGCCGTTACCGTTGAAGTTGTAGCCGTTGAAGTAAATCCCACCGACCCTTTTCTTGTCG
JMSF037C16+ AGGCCGTTACCGTTGAAGTTGTAGCCGTTGAAGTAAATCCCACCGACCCTTTTCTTGTCG
JMFF001H22+ AGGCCGTTACCGTTGAAGTTGTAGCCGTTGAAGTAAATCCCACCGACCCTTTTCTTGTCG
                      ____________________________________________________________
consensus AGGCCGTTACCGTTGAAGTTGTAGCCGTTGAAGTAAATCCCACCGACCCTTTTCTTGTCG
 
. : . : . : . : . : . :
JMSF042F11+ CCGCCTCTGGGCACGTAGCAGAAGAACCCTTGGTACTTCTTCTTATTTATGCACAGCTCA
JMSF044I16+ CCGCCTCTGGGCACGTAGCAGAAGAACCCTTGGTACTTCTTCTTATTTATGCACAGCTCA
JMSF036O16+ CCGCCTCTGGGCACGTAGCAGAAGAACCCTTGGTACTTCTTCTTATTTATGCACAGCTCA
JMSF046P03+ CCGCCTCTGGGCACGTAGCAGAAGAACCCTTGGTACTTCTTCTTATTTATGCACAGCTCA
JMSF017N19+ CCGCCTCTGGGCACGTAGCAGAAGAACCCTTGGTACTTCTTCTTATTTATGCACAGCTCA
JMSF008N24+ TCTTATTTATGCACAGCTCA
JMSF037C16+ CCGCCTCTGGGCACGTAGCAGAAGAACCCTTGGTACTTCTTCTTATTTATGCACAGCTCA
JMFF001H22+ CCGCCTCTGGGCACGTAGCAGAAGAACCCTTGGTACTTCTTCTTATTTATGCACAGCTCA
                      ____________________________________________________________
consensus CCGCCTCTGGGCACGTAGCAGAAGAACCCTTGGTACTTCTTCTTATTTATGCACAGCTCA
 
. : . : . : . : . : . :
JMSF042F11+ TTGCCTTCCCAGCTTTGGGTGATGTTTTGTGGGTCATATGTTATCGATTTCTTGAAAGTC
JMSF044I16+ TTGCCTTCCCAGCTTTGGGTGACGTTTTGTGGGTCATATGTTATCGATTTCTTGAAAGTC
JMSF036O16+ TTGCCTTCCCAGCTTTGGGTGATGTTTTGTGGGTCATATGTTATCGATTTCTTGAAAGTC
JMSF046P03+ TTGCCTTCCCAGCTTTGGGTGATGTTTTGTGGGTCATATGTTATCGATTTCTTGAAAGTC
JMSF017N19+ TTGCCTTCCCAGCTTTGGGTGATGTTTTGTGGGTCATATGTTATCGATTTCTTGAAAGTC
JMSF008N24+ TTGCCTTCCCAGCTTTGGGTGATGTTTTGTGGGTCATATGTTATCGATTTCTTGAAAGTC
JMSF037C16+ TTGCCTTCCCAGCTTTGGGTGATGTTTTGTGGGTCATATGTTATCGATTTCTTGAAAGTC
JMFF001H22+ TTGCCTTCCCAGCTTTGGGTGATGTTTTGTGGGTCATATGTTATCGATTTCTTGAAAGTC
                      ____________________________________________________________
consensus TTGCCTTCCCAGCTTTGGGTGATGTTTTGTGGGTCATATGTTATCGATTTCTTGAAAGTC
 
. : . : . : . : . : . :
JMSF042F11+ CTTATGGCTTTAATCGACTTCCGTATCACCGGATCCAGCGGCGGCGGGCATGGGGGCGGC
JMSF044I16+ CTTATGGCTTTAATCGACTTCCGTATCACCGGATCCAGCGGCGGCGGGCATGGGGGCGGC
JMSF036O16+ CTTATGGCTTTAATCGACTTCCGTATCACCGGATCCAGCGGCGGCGGGCATGGGGGCGGC
JMSF046P03+ CTTATGGCTTTAATCGACTTCCGTATCACCGGATCCAGCGGCGGCGGGCATGGGGGCGGC
JMSF017N19+ CTTATGGCTTTAATCGACTTCCGTATCACCGGATCCAGCGGCGGCGGGCATGGGGGCGGC
JMSF008N24+ CTTATGGCTTTAATCGACTTCCGTATCACCGGATCCAGCGGCGGCGGGCATGGGGGCGGC
JMSF017F04+ ACCGGATCCAGCGGCGGCGGGCATGGGGGCGGC
JMSF037C16+ CTTATGGCTTTAATCGACTTCCGTATCACCGGATCCAGCGGCGGCGGGCATGGGGGCGGC
JMFF001H22+ CTTATGGCTTTAATCGACTTCCGTATCACCGGATCCAGCGGCGGCGGGCATGGGGGCGGC
                      ____________________________________________________________
consensus CTTATGGCTTTAATCGACTTCCGTATCACCGGATCCAGCGGCGGCGGGCATGGGGGCGGC
 
. : . : . : . : . : . :
JMSF042F11+ GGGGGTGGAGGTACATAACAACCACAGTCGACATTATAAACAAGGGAGACAGGAGGGGAG
JMSF044I16+ GGGGGTGGAGGTACATAACAACCACAGTCGACATTATAAACAAGGGAGGCAGGAGGGGAG
JMSF036O16+ GGGGGTGGAGGTACATAACAACCACAGTCGACATTATAAACAAGGGAGGCAGGAGGGGAG
JMSF046P03+ GGGGGTGGAGGTACATAACAACCACAGTCGACATTATAAACAAGGGAGGCAGGAGGGGAG
JMSF017N19+ GGGGGTGGAGGTACATAACAACCACAGTCGACATTATAAACAAGGGAGGCAGGAGGGGAG
JMSF008N24+ GGGGGTGGAGGTACATAACAACCACAGTCGACATTATAAACAAGGGAGGCAGGAGGGGAG
JMSF017F04+ GGGGGTGGAGGTACATAACAACCACAGTCGACATTATAAACAAGGGAGGCAGGAGGGGAG
JMSF037C16+ GGGGGTGGAGGTACATAACAACCACAGTCGACATTATAAACAAGGGAGGCAGGAGGGGAG
JMFF001H22+ GGGGGTGGAGGTACATAACAACCACAGTCGACATTATAAACAAGGGAGGCAGGAGGGGAG
                      ____________________________________________________________
consensus GGGGGTGGAGGTACATAACAACCACAGTCGACATTATAAACAAGGGAGGCAGGAGGGGAG
 
. : . : . : . : . : . :
JMSF042F11+ GTTTCTTTACTTTCTTCTTCCCCAGGCATGATTTCTGATGGAATGGCAGTGGGGAGAAGA
JMSF044I16+ GTTTCTTTACTTTCTTCTTCCCCAGGCATGATTTCTGATGGAATGGCAGTGGGGAGAAGA
JMSF036O16+ GTTTCTTTACTTTCTTCTTCCCCAGGCATGATTTCTGATGGAATGGCAGTGGGGAGAAGA
JMSF046P03+ GTTTCTTTACTTTCTTCTTCCCCAGGCATGATTTCTGATGGAATGGCAGTGGGGAGAAGA
JMSF017N19+ GTTTCTTTACTTTCTTCTTCCCCAGGCATGATTTCTGATGGAATGGCAGTGGGGAGAAGA
JMSF008N24+ GTTTCTTTACTTTCTTCTTCCCCAGGCATGATTTCTGATGGAATGGCAGTGGGGAGAAGA
JMSF017F04+ GTTTCTTTACTTTCTTCTTCCCCAGGCATGATTTCTGATGGAATGGCAGTGGGGAGAAGA
JMSF037C16+ GTTTCTTTACTTTCTTCTTCCCCAGGCATGATTTCTGATGGAATGGCAGTGGGGAGAAGA
JMFF001H22+ GTTTCTTTACTTTCTTCTTCCCCAGGCATGATTTCTGATGGAATGGCAGTGGGGAGAAGA
                      ____________________________________________________________
consensus GTTTCTTTACTTTCTTCTTCCCCAGGCATGATTTCTGATGGAATGGCAGTGGGGAGAAGA
 
. : . : . : . : . : . :
JMSF042F11+ GAGAAGAAGACAAGGAGACATTTTGCTGCTCCAAATGGGGTGAAACTGAAACTGGGTGCC
JMSF044I16+ GAGAAGAAGACAAGGAGACATTTTGCTGCTCCAAATGGGGTGAAACTGAAACTGGGTGCC
JMSF036O16+ GAGAAGAAGACAAGGAGACATTTTGCTGCTCCAAATGGGGTGAAACTGAAACTGGGTGCC
JMSF046P03+ GAGAAGAAGACAAGGAGACATTTTGCTGCTCCAAATGGGGTGAAACTGAAACTGGGTGCC
JMSF017N19+ GAGAAGAAGACAAGGAGACATTTTGCTGCTCCAAATGGGGTGAAACTGAAACTGGGTGCC
JMSF008N24+ GAGAAGAAGACAAGGAGACATTTTGCTGCTCCAAATGGGGTGAAACTGAAACTGGGTGCC
JMSF017F04+ GAGAAGAAGACAAGGAGACATTTTGCTGCTCCAAATGGGGTGAAACTGAAACTGGGTGCC
JMSF037C16+ GAGAAGAAGACAAGGAGACATTTTGCTGCTCCAAATGGGGTGAAACTGAAACTGGGTGCC
JMFF001H22+ GAGAAGAAGACAAGGAGACATTTTGCTGCTCCAAATGGGGTGAAACTGAAACTGGGTGCC
                      ____________________________________________________________
consensus GAGAAGAAGACAAGGAGACATTTTGCTGCTCCAAATGGGGTGAAACTGAAACTGGGTGCC
 
. : . : . : . : . : . :
JMSF042F11+ ATTCTCATTATGAGTGGGATTTTTTT
JMSF044I16+ ATTCTCATTATGAGTGGGATTTTTTTTG
JMSF036O16+ ATTCTCATTATGAGTGGGATTTTTTTTGCC
JMSF046P03+ ATTCTCATTATGAGTGGGATTTTTTTTGCC
JMSF017N19+ ATTCTCATTATGAGTGGGATTTTTTTTGCC
JMSF008N24+ ATTCTCATTATGAGTGGGATTTTTTTTGCC
JMSF017F04+ ATTCTCATTATGAGTGGGATTTTTTTTG
JMSF037C16+ ATTCTCATTATGAGTGGGATTTTTTTTGCC
JMFF001H22+ ATTCTCATTATGAGTGGGATTTTTTTTGCAGGAATGGAGATGGAGGTAGCCCATACATGT
                      ____________________________________________________________
consensus ATTCTCATTATGAGTGGGATTTTTTTTGCCGGAATGGAGATGGAGGTAGCCCATACATGT