Contig 007269:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF001E05Sequence560007269 (7)ref|XP_009625296.1|7e-18PREDICTED: scarecrow-like protein 13 [Nicotiana tomentosiformis]714011212 (3)ref|XP_010312439.1|1e-106PREDICTED: GRAS1 protein isoform X1 [Solanum lycopersicum]
JMFF031N14Sequence590007269 (7)ref|XP_009625296.1|1e-24PREDICTED: scarecrow-like protein 13 [Nicotiana tomentosiformis]696011212 (3)ref|XP_010312439.1|4e-96PREDICTED: GRAS1 protein isoform X1 [Solanum lycopersicum]
JMFF049I02Sequence617007269 (7)ref|XP_009625296.1|9e-28PREDICTED: scarecrow-like protein 13 [Nicotiana tomentosiformis]713011212 (3)ref|XP_006365847.1|5e-37PREDICTED: scarecrow-like protein 13-like isoform X1 [Solanum tuberosum] ref|XP
JMFS061D01Sequence642007269 (7)ref|XP_009625296.1|1e-36PREDICTED: scarecrow-like protein 13 [Nicotiana tomentosiformis]
JMFS119B03Sequence626007269 (7)ref|XP_009625296.1|2e-31PREDICTED: scarecrow-like protein 13 [Nicotiana tomentosiformis]
JMFS160D11Sequence554007269 (7)ref|XP_009625296.1|3e-20PREDICTED: scarecrow-like protein 13 [Nicotiana tomentosiformis]
JMFS167D09Sequence627007269 (7)ref|XP_009625296.1|4e-40PREDICTED: scarecrow-like protein 13 [Nicotiana tomentosiformis]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS167D09+ CGCATCACTAAACGAGCAACTATAGTANTCGTCAA
                      ____________________________________________________________
consensus CGCATCACTAAACGAGCAACTATAGTANTCGTCAA
 
. : . : . : . : . : . :
JMFS167D09+ TTTCAGATTCGGGACCGAGCAATTTATTCTCCAATTCTCGCAACACATGCCTCAGTTCAT
JMFS119B03+ TTATTCTCCAATTCTCGCAACACATGCCTCAGTTCAT
JMFS061D01+ TTATTCTCCAATTCTCGCAACACATGCCTCAGTTCAT
JMFF049I02+ GCAACACATGCCTCAGTTCAT
                      ____________________________________________________________
consensus TTTCAGATTCGGGACCGAGCAATTTATTCTCCAATTCTCGCAACACATGCCTCAGTTCAT
 
. : . : . : . : . : . :
JMFS167D09+ TCCCATCAACAACGCCAGAACACCCGCTTAAAGGCGAACCACAAGTAGTATTATCCGACA
JMFS119B03+ TCCCATCAACAACGCCAGAACACCCGCTTAAAGGCGAACCACAAGTAGTATTATCCGACA
JMFS061D01+ TCCCATCAACAACGCCAGAACACCCGCTTAAAGGCGAACCACAAGTAGTATTATCCGACA
JMFF049I02+ TCCCATCAACAACGCCAGAACACCCGCTTAAAGGCGAACCACAAGTAGTATTATCCGACA
JMFS160D11+ TAAAGGCGAACCACAAGTAGTATTATCCGACA
JMFF031N14+ CAACAACGCCAGAACACCCGCTTAAAGGCGAACCACAAGTAGTATTATCCGACA
JMFF001E05+ ACAAGTAGTATTATCCGACA
                      ____________________________________________________________
consensus TCCCATCAACAACGCCAGAACACCCGCTTAAAGGCGAACCACAAGTAGTATTATCCGACA
 
. : . : . : . : . : . :
JMFS167D09+ TATACGACTGAGAGCATTGGGGAGAAAACGCGCTCCGATTGGAAGAAACACTGGCAGCAG
JMFS119B03+ TATACGACTGAGAGCATTGGGGAGAAAACGCGCTCCGATTGGAAGAAACACTGGCAGCAG
JMFS061D01+ TATACGACTGAGAGCATTGGGGAGAAAACGCGCTCCGATTGGAAGAAACACTGGCAGCAG
JMFF049I02+ TATACGACTGAGAGCATTGGGGAGAAAACGCGCTCCGATTGGAAGAAACACTGGCAGCAG
JMFS160D11+ TATACGACTGAGAGCATTGGGGAGAAAACGCGCTCCGATTGGAAGAAACACTGGCAGCAG
JMFF031N14+ TATACGACTGAGAGCATTGGGGAGAAAACGCGCTCCGATTGGAAGAAACACTGGCAGCAG
JMFF001E05+ TATACGACTGAGAGCATTGGGGAGAAAACGCGCTCCGATTGGAAGAAACACTGGCAGCAG
                      ____________________________________________________________
consensus TATACGACTGAGAGCATTGGGGAGAAAACGCGCTCCGATTGGAAGAAACACTGGCAGCAG
 
. : . : . : . : . : . :
JMFS167D09+ GGGGCGAATCATAATACACGGAATCAATTCCAGCAGGCGCTGAATCCAAAGTGAAGAACT
JMFS119B03+ GGGGCGAATCATAATACACGGAATCAATTCCAGCAGGCGCTGAATCCAAAGTGAAGAACT
JMFS061D01+ GGGGCGAATCATAATACACGGAATCAATTCCAGCAGGCGCTGAATCCAAAGTGAAGAACT
JMFF049I02+ GGGGCGAATCATAATACACGGAATCAATTCCAGCAGGCGCTGAATCCAAAGTGAAGAACT
JMFS160D11+ GGGGCGAATCATAATACACGGAATCAATTCCAGCAGGCGCTGAATCCAAAGTGAAGAACT
JMFF031N14+ GGGGCGAATCATAATACACGGAATCAATTCCAGCAGGCGCTGAATCCAAAGTGAAGAACT
JMFF001E05+ GGGGCGAATCATAATACACGGAATCAATTCCAGCAGGCGCTGAATCCAAAGTGAAGAACT
                      ____________________________________________________________
consensus GGGGCGAATCATAATACACGGAATCAATTCCAGCAGGCGCTGAATCCAAAGTGAAGAACT
 
. : . : . : . : . : . :
JMFS167D09+ GCTCGTTTTGGGCCTGGAAAAAGCCTTGTTCCCCTACACTACCACTCTCATTCGAAACAT
JMFS119B03+ GCTCGTTTTGGGCCTGGAAAAAGCCTTGTTCCCCTACACTACCACTCTCATTCGAAACAT
JMFS061D01+ GCTCGTTTTGGGCCTGGAAAAAGCCTTGTTCCCCTACACTACCACTCTCATTCGAAACAT
JMFF049I02+ GCTCGTTTTGGGCCTGGAAAAAGCCTTGTTCCCCTACACTACCACTCTCATTCGAAACAT
JMFS160D11+ GCTCGTTTTGGGCCTGGAAAAAGCCTTGTTCCCCTACACTACCACTCTCATTCGAAACAT
JMFF031N14+ GCTCGTTTTGGGCCTGGAAAAAGCCTTGTTCCCCTACACTACCACTCTCATTCGAAACAT
JMFF001E05+ GCTCGTTTTGGGCCTGGAAAAAGCCTTGTTCCCCTACACTACCACTCTCATTCGAAACAT
                      ____________________________________________________________
consensus GCTCGTTTTGGGCCTGGAAAAAGCCTTGTTCCCCTACACTACCACTCTCATTCGAAACAT
 
. : . : . : . : . : . :
JMFS167D09+ CGTTGTTCAAAACATGGAAAGCGGCATAATACTGCTGAGGCTGATGGTAAAACCTCTGTA
JMFS119B03+ CGTTGTTCAAAACATGGAAAGCGGCATAATACTGCTGAGGCTGATGGTAAAACCTCTGTA
JMFS061D01+ CGTTGTTCAAAACATGGAAAGCGGCATAATACTGCTGAGGCTGATGGTAAAACCTCTGTA
JMFF049I02+ CGTTGTTCAAAACATGGAAAGCGGCATAATACTGCTGAGGCTGATGGTAAAACCTCTGTA
JMFS160D11+ CGTTGTTCAAAACATGGAAAGCGGCATAATACTGCTGAGGCTGATGGTAAAACCTCTGTA
JMFF031N14+ CGTTGTTCAAAACATGGAAAGCGGCATAATACTGCTGAGGCTGATGGTAAAACCTCTGTA
JMFF001E05+ CGTTGTTCAAAACATGGAAAGCGGCATAATACTGCTGAGGCTGATGGTAAAACCTCTGTA
                      ____________________________________________________________
consensus CGTTGTTCAAAACATGGAAAGCGGCATAATACTGCTGAGGCTGATGGTAAAACCTCTGTA
 
. : . : . : . : . : . :
JMFS167D09+ CACTGCTAGACGACGATTGAGGTCCCTGGGAGGCCTGCATTTGTAGTTGCGGAATAACCC
JMFS119B03+ CACTGCTAGACGACGATTGAGGTCCCTGGGAGGCCTGCATTTGTAGTTGCGGAATAACCC
JMFS061D01+ CACTGCTAGACGACGATTGAGGTCCCTGGGAGGCCTGCATTTGTAGTTGCGGAATAACCC
JMFF049I02+ CACTGCTAGACGACGATTGAGGTCCCTGGGAGGCCTGCATTTGTAGTTGCGGAATAACCC
JMFS160D11+ CACTGCTAGACGACGATTGAGGTCCCTGGGAGGCCTGCATTTGTAGTTGCGGAATAACCC
JMFF031N14+ CACTGCTAGACGACGATTGAGGTCCCTGGGAGGCCTGCATTTGTAGTTGCGGAATAACCC
JMFF001E05+ CACTGCTAGACGACGATTGAGGTCCCTGGGAGGCCTGCATTTGTAGTTGCGGAATAACCC
                      ____________________________________________________________
consensus CACTGCTAGACGACGATTGAGGTCCCTGGGAGGCCTGCATTTGTAGTTGCGGAATAACCC
 
. : . : . : . : . : . :
JMFS167D09+ TTCTTCACTCGCTCAAAAATGGGTGAATACTACTTCACTTCAGGTACGTTTCTTCGATCG
JMFS119B03+ TTCTTCACTCGCTCAAAAATGGGTGAATACTACTTCACTTCAGGTACGTTTCTTCGATCG
JMFS061D01+ TTCTTCACTCGCTCAAAAATGGGTGAATACTACTTCACTTCAGGTACGTTTCTTCGATCG
JMFF049I02+ TTCTTCACTCGCTCAAAAATGGGTGAATACTACTTCACTTCAGGTACGTTTCTTCGATCG
JMFS160D11+ TTCTTCACTCGCTCAAAAATGGGTGAATACTACTTCACTTCAGGTACGTTTCTTCGATCG
JMFF031N14+ TTCTTCACTCGCTCAAAAATGGGTGAATACTACTTCACTTCAGGTACGTTTCTTCGATCG
JMFF001E05+ TTCTTCACTCGCTCAAAAATGGGTGAATACTACTTCACTTCAGGTACGTTTCTTCGATCG
                      ____________________________________________________________
consensus TTCTTCACTCGCTCAAAAATGGGTGAATACTACTTCACTTCAGGTACGTTTCTTCGATCG
 
. : . : . : . : . : . :
JMFS167D09+ AAACGAGTCCATTGATCACAAAAGGGAGTGTAACCAACAAAATCTGAACAAGTACTTCTC
JMFS119B03+ AAACGAGTCCATTGATCACAAAAGGGAGTGTAACCAACAAAATCTGAACAAGTACTTCTC
JMFS061D01+ AAACGAGTCCATTGATCACAAAAGGGAGTGTAACCAACAAAATCTGAACAAGTACTTCTC
JMFF049I02+ AAACGAGTCCATTGATCACAAAAGGGAGTGTAACCAACAAAATCTGAACAAGTACTTCTC
JMFS160D11+ AAACGAGTCCATTGATCACAAAAGGGAGTGTAACCAACAAAATCTGAACAAGTACTTCTC
JMFF031N14+ AAACGAGTCCATTGATCACAAAAGGGAGTGTAACCAACAAAATCTGAACAAGTACTTCTC
JMFF001E05+ AAACGAGTCCATTGATCACAAAAGGGAGTGTAACCAACAAAATCTGAACAAGTACTTCTC
                      ____________________________________________________________
consensus AAACGAGTCCATTGATCACAAAAGGGAGTGTAACCAACAAAATCTGAACAAGTACTTCTC
 
. : . : . : . : . : . :
JMFS167D09+ TGATGAATTTAAGTTTTCAGGATTTTTCTTTTCCTTCCGAGGGGAGAGACGA
JMFS119B03+ TGATGAATTTAAGTTTTCAGGATTTTTCTTTTCCTTCCGAGGGGAGAGACGATTGGTGGT
JMFS061D01+ TGATGAATTTAAGTTTTCAGGATTTTTCTTTTCCTTCCGAGGGGAGAGACGATTGGTGGT
JMFF049I02+ TGATGAATTTAAGTTTTCAGGATTTTTCTTTTCCTTCCGAGGGGAGAGACGATTGGTGGT
JMFS160D11+ TGATGAATTTAAGTTTTCAGGATTTTTCTTTTCCTTCCGAGGGGAGAGACGATTGGTGGT
JMFF031N14+ TGATGAATTTAAGTTTTCAGGATTTTTCTTTTCCTTCCGAGGGGAGAGACGATTGGTGGT
JMFF001E05+ TGATGAATTTAAGTTTTCAGGATTTTTCTTTTCCTTCCGAGGGGAGAGACGATTGGTGGT
                      ____________________________________________________________
consensus TGATGAATTTAAGTTTTCAGGATTTTTCTTTTCCTTCCGAGGGGAGAGACGATTGGTGGT
 
. : . : . : . : . : . :
JMFS119B03+ CCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTG
JMFS061D01+ CCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTGTCTTCTGCAACAAG
JMFF049I02+ CCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTGTCTTCTGCAACAAGCCGATTGCTT
JMFS160D11+ CCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTGTCTTCTGCAA
JMFF031N14+ CCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTGTCTTCTGCAACAAGCCGATTGCTT
JMFF001E05+ CCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTGTCTTCTGCAACAAGCCGATTGCTTAAAC
                      ____________________________________________________________
consensus CCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTGTCTTCTGCAACAAGCCGATTGCTTAAAC