Contig 007260:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMCP007G05Sequence623007260 (5)ref|XP_011470186.1|4e-49PREDICTED: cytochrome b5 isoform E [Fragaria vesca subsp. vesca]
JMFF002P01Sequence598007260 (5)gb|KJB46878.1|7e-14hypothetical protein B456_008G127700 [Gossypium raimondii]
JMFF042N20Sequence615007260 (5)ref|XP_011470186.1|4e-49PREDICTED: cytochrome b5 isoform E [Fragaria vesca subsp. vesca]609007260 (5)
JMFS152C03Sequence627007260 (5)ref|XP_011470186.1|4e-49PREDICTED: cytochrome b5 isoform E [Fragaria vesca subsp. vesca]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF042N20- ACTACAAATGAAC
                      ____________________________________________________________
consensus ACTACAAATGAAC
 
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rJMFF042N20- CTACACGTACATAATATGAATGTCGTTTTGAATCAAGATCCCCGATGCAGCGTGGACTAT
                      ____________________________________________________________
consensus CTACACGTACATAATATGAATGTCGTTTTGAATCAAGATCCCCGATGCAGCGTGGACTAT
 
. : . : . : . : . : . :
rJMFF042N20- ATAATTTGGCCACAAGGTCTGAGACATGTAAAGAAAAGTGTCTTAAAGTATTGGACATTA
rJMFF002P01- ATTGGACATTA
                      ____________________________________________________________
consensus ATAATTTGGCCACAAGGTCTGAGACATGTAAAGAAAAGTGTCTTAAAGTATTGGACATTA
 
. : . : . : . : . : . :
rJMFF042N20- TTGGCTAAAGGCCCAAAAGCAGCAGCAATATCACCAACAAGAATCTAAGGCTTAAATAAG
rJMFF002P01- TTGGCTAAGGGCCCAAAAGCAGCAGCAATATCACCAACAAGAATCTAAGGCTTAAATAAG
                      ____________________________________________________________
consensus TTGGCTAAGGGCCCAAAAGCAGCAGCAATATCACCAACAAGAATCTAAGGCTTAAATAAG
 
. : . : . : . : . : . :
rJMFF042N20- GGACTAGAACACCTGCATATTTAGGGATTGCAATAATGTAACAACACAATAAAACATAAA
rJMFF002P01- GGACTAGAACACCTGCATATTTAGGGATTGCAATAATGTAACAACACAATAAAACATAAA
                      ____________________________________________________________
consensus GGACTAGAACACCTGCATATTTAGGGATTGCAATAATGTAACAACACAATAAAACATAAA
 
. : . : . : . : . : . :
rJMFF042N20- TGGCAAACCTTATTTTTCTTCCCTCTAAAGTCTAAACACAAAACAATTAGACAACTACTC
rJMFF002P01- TGGCAAACCTTATTTTTCTTCCCTCTAAAGTCTAAACACAAAACAATTAGACAACTACTC
JMFF042N20+ CAAAACAATTAGACAACTACTC
JMFS152C03+ TC
                      ____________________________________________________________
consensus TGGCAAACCTTATTTTTCTTCCCTCTAAAGTCTAAACACAAAACAATTAGACAACTACTC
 
. : . : . : . : . : . :
rJMFF042N20- CAATAATACCACTTACCAAAATCTAACCTTATTGGCAAACCCCATTTTTATTCCCTCTTA
rJMFF002P01- CAATAATACCACTTACCAAAATCTAACCTTATTGGCAAACCCCATTTTTATTCCCTCTTA
JMFF042N20+ CAATAATACCACTTACCAAAATCTAACCTTATTGGCAAACCCCATTTTTATTCCCTCTTA
JMFS152C03+ CAATAATACCACTTACCAAAATCTAACCTTATTGGCAAACCCCATTTTTATTCCCTCTTA
JMCP007G05+ AACCCCATTTTTATTCCCTCTTA
                      ____________________________________________________________
consensus CAATAATACCACTTACCAAAATCTAACCTTATTGGCAAACCCCATTTTTATTCCCTCTTA
 
. : . : . : . : . : . :
rJMFF042N20- CCAACACTAGGAAATTTTAGTTTACTTCACTTTGACACATAAACTAATGAGAAAACACTA
rJMFF002P01- CCAACACTAGGAAATTTTAGTTTACTTCACTTTGACACATAAACTAATGAGAAAACACTA
JMFF042N20+ CCAACACTAGGAAATTTTAGTNTACTTCACTTTGACACATAAACTAATGAGAAAACACTA
JMFS152C03+ CCAACACTAGGAAATTTTAGTTTACTTCACTTTGACACATAAACTAATGAGAAAACACTA
JMCP007G05+ CCAACACTAGGAAATTTTAGTTTACTTCACTTTGACACATAAACTAATGAGAAAACACTA
                      ____________________________________________________________
consensus CCAACACTAGGAAATTTTAGTTTACTTCACTTTGACACATAAACTAATGAGAAAACACTA
 
. : . : . : . : . : . :
rJMFF042N20- ACATATCGCCACATCATCATCGTCATCGTCGTCTCTATTCCTTCTTGTTGAAGTACCGGA
rJMFF002P01- ACATATCGCCACATCATCATCGTCATCGTCGTCTCTATTCCTTCTTGTTGAAGTACCGGA
JMFF042N20+ ACATATCGCCACATCATCATCGTCATCGTCGTCTCTATTCCTTCTTGTTGAAGTACCGGA
JMFS152C03+ ACATATCGCCACATCATCATCGTCATCGTCGTCTCTATTCCTTCTTGTTGAAGTACCGGA
JMCP007G05+ ACATATCGCCACATCATCATCGTCATCGTCGTCTCTATTCCTTCTTGTTGAAGTACCGGA
                      ____________________________________________________________
consensus ACATATCGCCACATCATCATCGTCATCGTCGTCTCTATTCCTTCTTGTTGAAGTACCGGA
 
. : . : . : . : . : . :
rJMFF042N20- ATCCAACCGCAAACCCCAATATCAGTAAAGGCAGCAAGAATTGCAATAGTGTCATCATAC
rJMFF002P01- ATCCAACCGCAAACCCCAATATCAGTAAAGGCAGCAAGAATTGCAATAGTGTCATCATAC
JMFF042N20+ ATCCAACCGCAAACCCCAATATCAGTAAAGGCAGCAAGAATTGCAATAGTGTCATCATAC
JMFS152C03+ ATCCAACCGCAAACCCCAATATCAGTAAAGGCAGCAAGAATTGCAATAGTGTCATCATAC
JMCP007G05+ ATCCAACCGCAAACCCCAATATCAGTAAAGGCAGCAAGAATTGCAATAGTGTCATCATAC
                      ____________________________________________________________
consensus ATCCAACCGCAAACCCCAATATCAGTAAAGGCAGCAAGAATTGCAATAGTGTCATCATAC
 
. : . : . : . : . : . :
rJMFF042N20- CTCCCGATTTTTGCTTGGGTGCAAAGGATGTCGGAGGTGAAGTGTATATGGGTTTC
rJMFF002P01- CTCCCGATTTTTGCTTGGGTGCAGAGGATGTCGGAGGTGGAGTGTATATGGGTTTCTCCG
JMFF042N20+ CTCCCGATTTTTGCTTGGGTGCAGAGGATGTCGGAGGTGGAGTGTATATGGGTTTCTCCG
JMFS152C03+ CTCCCGATTTTTGCTTGGGTGCAGAGGATGTCGGAGGTGGAGTGTATATGGGTTTCTCCG
JMCP007G05+ CTCCCGATTTTTGCTTGGGTGCAGAGGATGTCGGAGGTGGAGTGTATATGGGTTTCTCCG
                      ____________________________________________________________
consensus CTCCCGATTTTTGCTTGGGTGCAGAGGATGTCGGAGGTGGAGTGTATATGGGTTTCTCCG
 
. : . : . : . : . : . :
rJMFF002P01- GCACAGTGTTGCTGTCAATATCACCAATATAGNATTTCTTCATCGNCTCTCTCGCATCAT
JMFF042N20+ GCACAGTGTTGCTGTCAATATCACCAATATAGTATTTCTTCATCGTCTCTCTCGCATCAT
JMFS152C03+ GCACAGTGTTGCTGTCAATATCACCAATATAGTATTTCTTCATCGTCTCTCTCGCATCAT
JMCP007G05+ GCACAGTGTTGCTGTCAATATCACCAATATAGTATTTCTTCATCGTCTCTCTCGCATCAT
                      ____________________________________________________________
consensus GCACAGTGTTGCTGTCAATATCACCAATATAGTATTTCTTCATCGTCTCTCTCGCATCAT
 
. : . : . : . : . : . :
rJMFF002P01- CGCTGTGCCCAATATCTTCAGAGNCATTGGTTGCATCCTTTCCCG
JMFF042N20+ CGCTGTGCCCAATATCTTCAAAGTCATTGGTTGCATCCTTTCCCGTTGCAGTTAGGAGGA
JMFS152C03+ CGCTGTGCCCAATATCTTCAAAGTCATTGGTTGCATCCTTTCCCGTTGCAGTTAGGAGGA
JMCP007G05+ CGCTGTGCCCAATATCTTCAAAGTCATTGGTTGCATCCTTTCCCGTTGCAGTTAGGAGGA
                      ____________________________________________________________
consensus CGCTGTGCCCAATATCTTCAAAGTCATTGGTTGCATCCTTTCCCGTTGCAGTTAGGAGGA
 
. : . : . : . : . : . :
JMFF042N20+ CATCGTCACCTCCAGGATGATCATCCAGATATGGAGTTACATTGTACACCTTTCCAGAGA
JMFS152C03+ CATCGTCACCTCCAGGATGATCATCCAGATATGGAGTTACATTGTACACCTTTCCAGAGA
JMCP007G05+ CATCGTCACCTCCAGGATGATCATCCAGATATGGAGTTACATTGTACACCTTTCCAGAGA
                      ____________________________________________________________
consensus CATCGTCACCTCCAGGATGATCATCCAGATATGGAGTTACATTGTACACCTTTCCAGAGA
 
. : . : . : . : . : . :
JMFF042N20+ TTATAATCCAGCAATCATCTTTCTTATTGTGCTTAGAAACCTCCTCAAAGGAATGAACTT
JMFS152C03+ TTATAATCCAGCAATCATCTTTCTTATTGTGCTTAGAAACCTCCTCAAAGGAATGAACTT
JMCP007G05+ TTATAATCCAGCAATCATCTTTCTTATTGTGCTTAGAAACCTCCTCAAAGGAATGAACTT
                      ____________________________________________________________
consensus TTATAATCCAGCAATCATCTTTCTTATTGTGCTTAGAAACCTCCTCAAAGGAATGAACTT
 
. : . : . : . : . : . :
JMFF042N20+ TGGCGTCGGAACTCATCTT
JMFS152C03+ TGGCGTCGGAACTCATCTT----TTGAAGAGACGGGAATGGGGCTCTGGCTCTCGCTCGC
JMCP007G05+ TGGCGTCGGAACTCATCTTCAACTTGAAGAGACGGGAATGGGGCTCTGGCTCTCGCTCGC
                      ____________________________________________________________
consensus TGGCGTCGGAACTCATCTTCAACTTGAAGAGACGGGAATGGGGCTCTGGCTCTCGCTCGC
 
. : . : . : . : . : . :
JMFS152C03+ AGGAAAGGCAACAGAATTCGCTAAAACTC
JMCP007G05+ AGGAAAGGCAACAGAATTCGCTAAAACTCCCAAGAATTTGGGTTTGTGAATCCCGAGGTG
                      ____________________________________________________________
consensus AGGAAAGGCAACAGAATTCGCTAAAACTCCCAAGAATTTGGGTTTGTGAATCCCGAGGTG