Contig 007252:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF004G14Sequence436013376 (5)ref|XP_009769939.1|5e-35PREDICTED: non-specific phospholipase C1 [Nicotiana sylvestris]570007252 (4)dbj|BAD26587.1|4e-50phospholipase [Citrullus lanatus]
JMSF004G16Sequence436002933 (9)ref|XP_009596714.1|8e-18PREDICTED: protein TIFY 10A-like isoform X2 [Nicotiana tomentosiformis]211007252 (4)gb|EMS45693.1|1e-17Phospholipase C 3 [Triticum urartu]
JMSF024P13Sequence664013376 (5)ref|XP_009611204.1|5e-51PREDICTED: non-specific phospholipase C1 isoform X2 [Nicotiana tomentosiformis]731007252 (4)gb|AFW67100.1|1e-91hypothetical protein ZEAMMB73_724533 [Zea mays]
JMSF051D03Sequence683013376 (5)ref|XP_009611204.1|9e-101PREDICTED: non-specific phospholipase C1 isoform X2 [Nicotiana tomentosiformis]756007252 (4)gb|AFW67100.1|2e-91hypothetical protein ZEAMMB73_724533 [Zea mays]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF024P13+ TTCTCCATGGATTGACAAGGCCACTGTGATCCATGA
rJMSF051D03+ TTCTCCATGGATTGACAAGGCCACTGTGATCCATGA
                      ____________________________________________________________
consensus TTCTCCATGGATTGACAAGGCCACTGTGATCCATGA
 
. : . : . : . : . : . :
rJMSF024P13+ ACCTAATGGTCCACAGTCATCTTCACAATTTGAACATTCTTCAATACCAGCAACAGTTAA
rJMSF051D03+ ACCTAATGGTCCACAGTCATCTTCACAATTTGAACATTCTTCAATACCAGCAACAGTTAA
                      ____________________________________________________________
consensus ACCTAATGGTCCACAGTCATCTTCACAATTTGAACATTCTTCAATACCAGCAACAGTTAA
 
. : . : . : . : . : . :
rJMSF024P13+ GCGGCTTTTTAATCTGGAATCAAGCTTCTTGACCAAAAGGGACGCGTGGGCTGGAAGCTT
rJMSF051D03+ GCGGCTTTTTAATCTGGAATCAAGCTTCTTGACCAAAAGGGACGCGTGGGCTGGAAGCTT
                      ____________________________________________________________
consensus GCGGCTTTTTAATCTGGAATCAAGCTTCTTGACCAAAAGGGACGCGTGGGCTGGAAGCTT
 
. : . : . : . : . : . :
rJMSF024P13+ TGACAGCTACTTTCATCTGCGCCAGACTCCCCGTGATGATTGTCCAGAAACACTCCCGGA
rJMSF004G14+ CTCCCCGTGATGATTGTCCAGAAACACTCCCGGA
rJMSF051D03+ TGACAGCTACTTTCATCTGCGCCAGACTCCCCGTGATGATTGTCCAGAAACACTCCCGGA
                      ____________________________________________________________
consensus TGACAGCTACTTTCATCTGCGCCAGACTCCCCGTGATGATTGTCCAGAAACACTCCCGGA
 
. : . : . : . : . : . :
rJMSF024P13+ GGTGACAAAATCATTGAGGCCACGGGGACCTCAAGAAGACGCCAAACTCTCTGAATTCCA
rJMSF004G14+ GGTGACAAAATCATTGAGGCCACGGGGACCTCAAGAAGACGCCAAACTCTCTGAATTCCA
rJMSF051D03+ GGTGACAAAATCATTGAGGCCACGGGGACCTCAAGAAGACGCCAAACTCTCTGAATTCCA
                      ____________________________________________________________
consensus GGTGACAAAATCATTGAGGCCACGGGGACCTCAAGAAGACGCCAAACTCTCTGAATTCCA
 
. : . : . : . : . : . :
rJMSF004G16+ TATCC
rJMSF024P13+ ACTCGAGCTGATCCAGCTTGCATCTCAGCTTTGTGGCGATCACGTTCTAAATACTTATCC
rJMSF004G14+ ACTCGAGCTGATCCAGCNTGCATCTCAGCTTNGTGGCGATCACGTTNTAAATACTTATCC
rJMSF051D03+ ACTCGAGCTGATCCAGCTTGCATCTCAGCTTTGTGGCGATCACGTTCTAAATACTTATCC
                      ____________________________________________________________
consensus ACTCGAGCTGATCCAGCTTGCATCTCAGCTTTGTGGCGATCACGTTCTAAATACTTATCC
 
. : . : . : . : . : . :
rJMSF004G16+ TGACATCGGGAAGGACATGAACATTGGGGAAGCCAACCGATACGTAGNGGATGCAGTCGA
rJMSF024P13+ TGACATCGGGAAGGACATGAACGTTGGGGAAGCCAACCGATACGTAGAGGATGCAGTCGA
rJMSF004G14+ TGACATCGGGAAGGACATGAACATTGGGGAAGCCAACCGATACGTAGAGGATGCAGTCGA
rJMSF051D03+ TGACATCGGGAAGGACATGAACGTTGGGGAAGCCAACCGATACGTAGAGGATGCAGTCGA
                      ____________________________________________________________
consensus TGACATCGGGAAGGACATGAACGTTGGGGAAGCCAACCGATACGTAGAGGATGCAGTCGA
 
. : . : . : . : . : . :
rJMSF004G16+ GAGGTTNTTGGAGGCTGGAAGGGNNGCCNTAATAGNCGGAGCAAATGAATCANCAATTGT
rJMSF024P13+ GAGGTTCTTGGAGGCTGGAAGGGCTGCCTTAATAGCCGGAGCAAATGAATCAGCAATTGT
rJMSF004G14+ GAGGTTCTTGGAGGCTGGAAGGGCTGCCTTAATAGCCGGAGCAAATGAATCAGCAATTGT
rJMSF051D03+ GAGGTTCTTGGAGGCTGGAAGGGCTGCCTTAATAGCCGGAGCAAATGAATCAGCAATTGT
                      ____________________________________________________________
consensus GAGGTTCTTGGAGGCTGGAAGGGCTGCCTTAATAGCCGGAGCAAATGAATCAGCAATTGT
 
. : . : . : . : . : . :
rJMSF004G16+ NACAATGAGACCAGCTCTGACTAGTCGAACATCAGTGGGATNGGGANCTGCCAGTNCTTN
rJMSF024P13+ CACAATGAGACCAGCTCTGACTAGTCGAACATCAGTGGGACTGGGAACTGCCAGTGCTTA
rJMSF004G14+ CACAATGAGACCAGCTCTGANTAGTCGAACATCAGTGGGACTGGGAACTGCCAGTGCTTA
rJMSF051D03+ CACAATGAGACCAGCTCTGACTAGTCGAACATCAGTGGGACTGGGAACTGCCAGTGCTTA
                      ____________________________________________________________
consensus CACAATGAGACCAGCTCTGACTAGTCGAACATCAGTGGGACTGGGAACTGCCAGTGCTTA
 
. : . : . : . : . : . :
rJMSF004G16+ ACATCATTNTAGNTTATCCAGTTA
rJMSF024P13+ ACATCATTCTAGTTTATCCAGTTATTGTACGTACATACCTTCTGCAATGTGGGCACACGT
rJMSF004G14+ ACATCATTNTAGTTTATCCAGTTATTGTACGTACATACCTTCTGCAATGTGGGCACACGT
rJMSF051D03+ ACATCATTCTAGTTTATCCAGTTATTGTACGTACATACCTTCTGCAATGTGGGCACACGT
                      ____________________________________________________________
consensus ACATCATTCTAGTTTATCCAGTTATTGTACGTACATACCTTCTGCAATGTGGGCACACGT
 
. : . : . : . : . : . :
rJMSF024P13+ GGTGTTGGAAGTCATCAACTCTCCTCAATGCATGTAAATAGTCGCTCAGAACCATTTCAA
rJMSF004G14+ GGTGTTGGAAGTCATCAACTCTCCTCAANGCATGTAAATAGTCGCTCAGAACCATTTCAA
rJMSF051D03+ GGTGTTGGAAGTCATCAACTCTCCTCAATGCATGTAAATAGTCGCTCAGAACCATTTCAA
                      ____________________________________________________________
consensus GGTGTTGGAAGTCATCAACTCTCCTCAATGCATGTAAATAGTCGCTCAGAACCATTTCAA
 
. : . : . : . : . : . :
rJMSF024P13+ TTGTCTCTATATTTGTATCCTGCTATATATCTCTATATGTATAAATTATTTTAGATACTG
rJMSF004G14+ TTGTCTCTATATTTGTATCCTGCTATATATCTCTATATGNATAAATTATTTTAGATACTG
rJMSF051D03+ TTGTCTCTATATTTGTATCCTGCTATATATCTCTATATGTATAAATTATTTTAGATACTG
                      ____________________________________________________________
consensus TTGTCTCTATATTTGTATCCTGCTATATATCTCTATATGTATAAATTATTTTAGATACTG
 
. : . : . : . : . : . :
rJMSF024P13+ TTCGAATCAAATTGTGATCATTCCTATGTATAATC
rJMSF004G14+ TTCGAATCAAATTGTGATCATTCCTATGTATAATCATTTGAATCTTAGAAGTCAAA
rJMSF051D03+ TTCGAATCAAATTGTGATCATTCCTATGTATAATCATTTGAATCTTAGAAGTCAAACATT
                      ____________________________________________________________
consensus TTCGAATCAAATTGTGATCATTCCTATGTATAATCATTTGAATCTTAGAAGTCAAACATT