Contig 007246:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF031L17Sequence599004675 (4)gb|EPS60280.1|1e-47hypothetical protein M569_14524, partial [Genlisea aurea]789007246 (2)ref|XP_008437663.1|1e-24PREDICTED: two-component response regulator-like PRR95 [Cucumis melo]
JMSF050J12Sequence691004675 (4)gb|EPS60280.1|2e-72hypothetical protein M569_14524, partial [Genlisea aurea]770007246 (2)ref|XP_008437663.1|9e-19PREDICTED: two-component response regulator-like PRR95 [Cucumis melo]

Alignment

This contig is upended


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rJMFF031L17+                   ATTGGAGCATTTGATGACTACNTCAATTGCAATCACATAAATCCAAGTTCA
rJMSF050J12+                    TTGGAGCATTTGATGACTACCTCAATTGCAATCACATAAATCCCAGTTCA
                      ____________________________________________________________
consensus                      ATTGGAGCATTTGATGACTACCTCAATTGCAATCACATAAATCCCAGTTCA
 
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rJMFF031L17+          AATACTAGTCCCAACAAGGTTGATTCTGCTGCACCCGAATTGGATCTTTCCTTGACAAGA
rJMSF050J12+          AATACTAGTCCCAACAAGGTTGATTCTGCTGCACCCGAATTGGATCTTTCCTTGACAAGA
                      ____________________________________________________________
consensus             AATACTAGTCCCAACAAGGTTGATTCTGCTGCACCCGAATTGGATCTTTCCTTGACAAGA
 
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rJMFF031L17+          ACACATCCTAGTTCCATGCTGAATCAATTTGTAGACAAGCATAGATTAAACCACTCAGAT
rJMSF050J12+          ACACATCCTAGTTCCATGCTGAATCAATTTGTAGACAAGCATAGATTAAACCACTCAGAT
                      ____________________________________________________________
consensus             ACACATCCTAGTTCCATGCTGAATCAATTTGTAGACAAGCATAGATTAAACCACTCAGAT
 
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rJMFF031L17+          GGATCAGCCTTTACACCATATGTTAACAAGGGCACTCAGAAGCACCAAGGATTAACCATC
rJMSF050J12+          GGATCAGCCTTTACACCATATGTTAACAAGGGCACTCAGAAGCACCAAGGATTAACCATC
                      ____________________________________________________________
consensus             GGATCAGCCTTTACACCATATGTTAACAAGGGCACTCAGAAGCACCAAGGATTAACCATC
 
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rJMFF031L17+          CCTATTGCTGAGAGAGGTGTGAGGTTTGAGGGTGTAAGCAGCCCTGTGATATCTCCAAGT
rJMSF050J12+          CCTATTGCTGAGAGAGGTGTGAGGTTTGAGGGTGTAAGCAGCCCTGTGATATCTCCAAGT
                      ____________________________________________________________
consensus             CCTATTGCTGAGAGAGGTGTGAGGTTTGAGGGTGTAAGCAGCCCTGTGATATCTCCAAGT
 
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rJMFF031L17+          GATTCCCCTCCTGGTTCTGGCAATGTAGATTCTCCTCCCCTTGAGCCAAATCCAGTTCAT
rJMSF050J12+          GATTCCCCTCCTGGTTCTGGCAATGTAGATTCTCCTCCCCTTGAGCCAAATCCAGTTCAT
                      ____________________________________________________________
consensus             GATTCCCCTCCTGGTTCTGGCAATGTAGATTCTCCTCCCCTTGAGCCAAATCCAGTTCAT
 
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rJMFF031L17+          CCTTCCACAGCTGAGTGTAGGAAGGAAGAAGTTTCCCCCGGTCAAGATGGAAACTCTCAT
rJMSF050J12+          CCTTCCACAGCTGAGTGTAGGAAGGAAGAAGTTTCCCCCGGTCAAGATGGAAACTCTCAT
                      ____________________________________________________________
consensus             CCTTCCACAGCTGAGTGTAGGAAGGAAGAAGTTTCCCCCGGTCAAGATGGAAACTCTCAT
 
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rJMFF031L17+          CGATCATCTCAAAGAGAAGCAGCTCTCACCAAATTCCGCTTGAAGAGGAAAGACAGATGT
rJMSF050J12+          CGATCATCTCAAAGAGAAGCAGCTCTCACCAAATTCCGCTTGAAGAGGAAAGACAGATGT
                      ____________________________________________________________
consensus             CGATCATCTCAAAGAGAAGCAGCTCTCACCAAATTCCGCTTGAAGAGGAAAGACAGATGT
 
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rJMFF031L17+          TACGAGAAGAAGGTAAGATACGA---GAGCAGGAAAAAACTTGCAGAGCAGCGGCCACGG
rJMSF050J12+          TACGAGAAGAAGGTAGTATTGGATTCATACTGGGAAGGGGAAACTGTTGGGCGGAGGCCG
                      ____________________________________________________________
consensus             TACGAGAAGAAGGTAGTATTGGATTCGTGCTGGGAAGGGGTTGCTGTTGGGCGGCGGCGG
 
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rJMFF031L17+          GTGAAGGGACAGTTTGTTCGC                                       
rJMSF050J12+          ATAAAAGCCAAGTCCAACACTATGTGACTAGCTAGGAGATTGCTAGACAGAGGTCGATAA
                      ____________________________________________________________
consensus             GTGAAGGGCCAGTTTGTTCGTATGTGACTAGCTAGGAGATTGCTAGACAGAGGTCGATAA
 
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rJMSF050J12+          AGGTAAGATACGAGAGCAGGAAAAAACTTGCAGAGCAGCGGCCACGGGTGAAGGGACAGT
                      ____________________________________________________________
consensus             AGGTAAGATACGAGAGCAGGAAAAAACTTGCAGAGCAGCGGCCACGGGTGAAGGGACAGT
 
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rJMSF050J12+          TTGTTCGCAGGCAGGCAACCGGCACGGGGGCGCCACCAGGTGACAATGTGATGATTAGTA
                      ____________________________________________________________
consensus             TTGTTCGCAGGCAGGCAACCGGCACGGGGGCGCCACCAGGTGACAATGTGATGATTAGTA
 
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rJMSF050J12+          CTGTAAATCAATAGCTGATATTTACAAGGAAAGCGCATACATATCCAGAATTTCTAAAAC
                      ____________________________________________________________
consensus             CTGTAAATCAATAGCTGATATTTACAAGGAAAGCGCATACATATCCAGAATTTCTAAAAC