Contig 007242:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF046K19Sequence644000590 (6)ref|XP_009777968.1|3e-89PREDICTED: putative chloride channel-like protein CLC-g isoform X1 [Nicotiana s537007242 (5)ref|XP_009777969.1|1e-57PREDICTED: putative chloride channel-like protein CLC-g isoform X2 [Nicotiana s
JMSF017O08Sequence483000590 (6)ref|XP_009777968.1|2e-53PREDICTED: putative chloride channel-like protein CLC-g isoform X1 [Nicotiana s613007242 (5)ref|XP_009777969.1|1e-85PREDICTED: putative chloride channel-like protein CLC-g isoform X2 [Nicotiana s
JMSF036K07Sequence717000590 (6)ref|XP_010050093.1|2e-70PREDICTED: putative chloride channel-like protein CLC-g [Eucalyptus grandis] gb746007242 (5)ref|XP_009777969.1|2e-115PREDICTED: putative chloride channel-like protein CLC-g isoform X2 [Nicotiana s
JMSF049P22Sequence688007242 (5)ref|XP_007204268.1|9e-102hypothetical protein PRUPE_ppa001699mg [Prunus persica] gb|EMJ05467.1| hypotheti769007242 (5)ref|XP_010050093.1|3e-69PREDICTED: putative chloride channel-like protein CLC-g [Eucalyptus grandis] gb

Alignment

This contig is upended


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JMSF049P22-                     TAGATTCTGAATTCCATCTCTTATCAATGCTAATTTTCTTTGTCACCTGC
                      ____________________________________________________________
consensus                       TAGATTCTGAATTCCATCTCTTATCAATGCTAATTTTCTTTGTCACCTGC
 
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JMSF049P22-           TTCTTCCTCAGTATCTTTAGTTACGGAATTGTAGCTCCTACGGGTCTTTTTGTACCTGTG
                      ____________________________________________________________
consensus             TTCTTCCTCAGTATCTTTAGTTACGGAATTGTAGCTCCTACGGGTCTTTTTGTACCTGTG
 
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JMSF049P22-           ATTGTAACAGGTGCGGCTTATGGAAGATTTGTTGGGATGATAGTTAGTGGACGGTCAAAT
                      ____________________________________________________________
consensus             ATTGTAACAGGTGCGGCTTATGGAAGATTTGTTGGGATGATAGTTAGTGGACGGTCAAAT
 
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JMSF049P22-           CTAAACCATGGTCTCTTTGCAGTTCTAGGTTCTGCTTCTCTTCTTGGAGGATCTATGAGG
                      ____________________________________________________________
consensus             CTAAACCATGGTCTCTTTGCAGTTCTAGGTTCTGCTTCTCTTCTTGGAGGATCTATGAGG
 
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JMSF049P22-           GCAACTGTTTCTTTATGTATAATTATCCTTGAACTGACCAATAACCTATTATTACTACCA
                      ____________________________________________________________
consensus             GCAACTGTTTCTTTATGTATAATTATCCTTGAACTGACCAATAACCTATTATTACTACCA
 
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JMSF049P22-           CTCATAATGCTAGTTCTTCTTGTATCTAAAACAGTGGCAGATTCATTTAATGGAAATATT
rJMSF036K07+                                    TAAANCAGTGGCAGATTCATTTAATGGAAATATT
                      ____________________________________________________________
consensus             CTCATAATGCTAGTTCTTCTTGTATCTAAAACAGTGGCAGATTCATTTAATGGAAATATT
 
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JMSF049P22-           TACGACCTGTTAGTGCAAGCAAAGGGTTTTCCATATCTAGAAGCTCATGCAGAGCCATAT
rJMSF036K07+          TACGACCTGTTAGTGCAAGCAAAGGGTTTTCCATATCTAGAAGCTCATGCAGAGCCATAT
                      ____________________________________________________________
consensus             TACGACCTGTTAGTGCAAGCAAAGGGTTTTCCATATCTAGAAGCTCATGCAGAGCCATAT
 
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JMSF049P22-           ATGAGGCAACTTACTGTCAGTGATGTGGTCACAGGGCCACTTCAATTTTTCCATGGCATT
rJMSF036K07+          ATGAGGCAACTTACTGTCAGTGATGTGGTCACAGGGCCACTTCAATTTTTCCATGGCATT
rJMSF017O08+                                                  TTCAATTTTTCCATGGCATT
rJMSF049P22+                     TACTGTCAGTGATGTGGTCACAGGGCCACTTCAATTTTTCCATGGCATT
                      ____________________________________________________________
consensus             ATGAGGCAACTTACTGTCAGTGATGTGGTCACAGGGCCACTTCAATTTTTCCATGGCATT
 
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JMSF049P22-           GAGAAGGTCAGTAATATAGTTCATGTCCTAAGAACCACAGGGCATAATGGGTTTCCTGTG
rJMSF036K07+          GAGAAGGTCAGTAATATAGTTCATGTCCTAAGAACCACAGGGCATAATGGGTTTCCTGTG
rJMSF017O08+          GAGAAGGTCAGTAATATAGTTCATGTCCTAAGAACCACAGGGCATAATGGGTTTCCTGTG
rJMSF049P22+          GAGAAGGTCAGTAATATAGTTCATGTCCTNAGAACCACAGGGCATAATGGGTTTCCTGTG
                      ____________________________________________________________
consensus             GAGAAGGTCAGTAATATAGTTCATGTCCTAAGAACCACAGGGCATAATGGGTTTCCTGTG
 
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JMSF049P22-           CTGGATGAGCTTCCACTATCTGAATCCCCAATTTTGTCTGGTTTGATCCTTCGTGCCCAT
rJMSF036K07+          CTGGATGAGCTTCCACTATCTGAATCCCCAATTTTGTCTGGTTTGATCCTTCGTGCCCAT
rJMSF017O08+          CTGGATGAGCTTCCACTATCTGAATCCCCAATTTTGTCTGGTTTGATCCTTCGTGCCCAT
rJMSF049P22+          CTGGATGAGCTTCCACTATCTGAATCCCCAATTTTGTCTGGTTTGATCCTTCGTGCCCAT
                      ____________________________________________________________
consensus             CTGGATGAGCTTCCACTATCTGAATCCCCAATTTTGTCTGGTTTGATCCTTCGTGCCCAT
 
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JMSF049P22-           CTTATTACATTGTTAAAGCAGAAAGCCTTTTTGCATGATCCTGTGTGTATTAGCGAGTTT
rJMSF036K07+          CTTATTACATTGTTAAAGCAGAAAGCCTTTTTGCATGATCCTGTGTGTATTAGCGAGTTT
rJMSF017O08+          CTTATTACATTGTTAAAGCAGAAAGCCTTTTTGCATGATCCTGTGTGTATTAGCGAGTNT
rJMFF046K19+                       TAAAGCAGAAAGCCTTTTTGCATGATCCTGTGTGTATTAGCGAGTTT
rJMSF049P22+          CTTATTACATTGTTAAAGCAGAAAGCCTTTTTGCATGATCCTGTGTGTATTAGCGAGTTT
                      ____________________________________________________________
consensus             CTTATTACATTGTTAAAGCAGAAAGCCTTTTTGCATGATCCTGTGTGTATTAGCGAGTTT
 
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JMSF049P22-           GCCGTTGATGAGTTCTCTCCAGATGATTTTGCAAAGAA                      
rJMSF036K07+          GCCGTTGATGAGTTCTCTCCAGATGATTTTGCAAAGAAGGGTTTGGGCCATGGAGACAGA
rJMSF017O08+          GCCGTTGATGAGTTCTCTCCAGATGATTTTGCAAAGAAGGGTTTGGGCCATGGAGACAGA
rJMFF046K19+          GCCGTTGATGAGTTCTCTCCAGATGATTTTGCAAAGAAGGGTTTGGGCCATGGAGACAGA
rJMSF049P22+          GCCGTTGATGAGTTCTCTCCAGATGATTTTGCAAAGAAGGGTTTGAGCCATGGAGACAGA
                      ____________________________________________________________
consensus             GCCGTTGATGAGTTCTCTCCAGATGATTTTGCAAAGAAGGGTTTGGGCCATGGAGACAGA
 
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rJMSF036K07+          ATTGAAGACATTATATTGACAGATGAAGAAATGGAAATGTATATAGATCTGCATCATTTT
rJMSF017O08+          ATTGAAGACATTATATTGACAGATGAAGAAATGGAAATGTATATAGATCTGCATCATTTT
rJMFF046K19+          ATTGAAGACATTATATTGACAGATGAAGAAATGGAAATGTATATAGATCTGCATCATTTT
rJMSF049P22+          ATTGAAGACATTATATTGACAGATGAAGAAATGGAAATGTATATAGATCTGCATCATTTT
                      ____________________________________________________________
consensus             ATTGAAGACATTATATTGACAGATGAAGAAATGGAAATGTATATAGATCTGCATCATTTT
 
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rJMSF036K07+          ACCAATGCTTCACCATATACTGTTCTTGAGACGATGTCCTTATCAAAGGCTCGCACACTC
rJMSF017O08+          ACCAATGCTTCACCATATACTGTTCTTGAGACGATGTCCTTATCAAAGGCTCGCACACTC
rJMFF046K19+          ACCAATGCTTCACCATATACTGTTCTTGAGACGATGTCCTTATCAAAGGCTCGCACACTC
rJMSF049P22+          ACCAATGCTTCACCATATACTGTTCTTGAGACGATGTCCTTATCAAAGGCTCGCACACTC
                      ____________________________________________________________
consensus             ACCAATGCTTCACCATATACTGTTCTTGAGACGATGTCCTTATCAAAGGCTCGCACACTC
 
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rJMSF036K07+          TTCAGGCAACTTGGTTTAAGGCACTTGCTGGTGGTTCCACAGATTCCCGGT         
rJMSF017O08+          TTCAGGCAACTTGGTTTAAGGCACTTGCTGGTGGTTCCACAGATTCCCGGT         
rJMFF046K19+          TTCAGGCAACTTGGTTTAAGGCACTTGCTGGTGGTTCCACAGATTCCCGGT         
rJMSF049P22+          TTCAGGCAACTTGGTTTAAGGCACTTGCTGGTGGTTCCACAGATTCCCGGTGTAAGTACT
                      ____________________________________________________________
consensus             TTCAGGCAACTTGGTTTAAGGCACTTGCTGGTGGTTCCACAGATTCCCGGTGTAAGTACT
 
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rJMSF049P22+          TTACCCTGCCACCCCCGAGGCCCTGAGCTGTTCTTTTCTATGTTGTTAATGTTTTATGCG
                      ____________________________________________________________
consensus             TTACCCTGCCACCCCCGAGGCCCTGAGCTGTTCTTTTCTATGTTGTTAATGTTTTATGCG
 
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rJMSF049P22+          AGAAACATTTTAGTCTTCATCAAGTATGCGTTTACACTATCGTTTTGCTTATTTCCAGAG
                      ____________________________________________________________
consensus             AGAAACATTTTAGTCTTCATCAAGTATGCGTTTACACTATCGTTTTGCTTATTTCCAGAG
 
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rJMSF049P22+          ATTACCAGTAGTGGGTATCATGACAAGGCACGACTTCATGCCAGAACATGTGCTGAATCT
                      ____________________________________________________________
consensus             ATTACCAGTAGTGGGTATCATGACAAGGCACGACTTCATGCCAGAACATGTGCTGAATCT
 
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rJMSF049P22+          TCATCCATCCATGGCACTAAGCAGGTGGAAAAGGTTGAGATTCCAGATGCCTCGCTGGAA
                      ____________________________________________________________
consensus             TCATCCATCCATGGCACTAAGCAGGTGGAAAAGGTTGAGATTCCAGATGCCTCGCTGGAA
 
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rJMSF049P22+          TAAGCTGTTCTAACAAAGGAAGGTTAACGAGATTGTTTCATAGTTTGTCACTTGAGAGTG
                      ____________________________________________________________
consensus             TAAGCTGTTCTAACAAAGGAAGGTTAACGAGATTGTTTCATAGTTTGTCACTTGAGAGTG