Contig 007220:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFN003H24+                                                     ATGTAGAAGTCAAACTAA
                      ____________________________________________________________
consensus                                                       ATGTAGAAGTCAAACTAA
 
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JMFN003H24+           TTATAATTGAGGTTTAAATGAATATATACACAAATTATATTAAATGAATATATACACACT
                      ____________________________________________________________
consensus             TTATAATTGAGGTTTAAATGAATATATACACAAATTATATTAAATGAATATATACACACT
 
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JMFN003H24+           TCTCCAATCAAGACGTGTCGTCTTCATTTTGTACTAATAATATAATATAATAATATAATA
                      ____________________________________________________________
consensus             TCTCCAATCAAGACGTGTCGTCTTCATTTTGTACTAATAATATAATATAATAATATAATA
 
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JMFN003H24+           ATATAATAATAATAAATGAGAGGTCAACAGCTAAACATGTCGAGAAGCTTCTTCAGAAAC
JMSF045D12-                                                                  GAAAC
                      ____________________________________________________________
consensus             ATATAATAATAATAAATGAGAGGTCAACAGCTAAACATGTCGAGAAGCTTCTTCAGAAAC
 
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JMFN003H24+           TCTGCCTCACTATCTCTCTCGTTCATTGCTCCAGCTGAGGTTTTGAATACGGCCAAGTGG
JMSF045D12-           TCTGCCTCACTATCTCTCTCGTTCATTGCTCCAGCTGAGGTTTTGAATACGGCCAAGTGG
                      ____________________________________________________________
consensus             TCTGCCTCACTATCTCTCTCGTTCATTGCTCCAGCTGAGGTTTTGAATACGGCCAAGTGG
 
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JMFN003H24+           CCGGAAACCTCAAATTACCGCGGATGAACTCCATCACCGTAAAGTCAACAACTAAAAATC
JMSF045D12-           CCGGAAACCTCAAATTACCGCGGATGAACTCCATCACCGTAAAGTCAACAACTAAAAATC
                      ____________________________________________________________
consensus             CCGGAAACCTCAAATTACCGCGGATGAACTCCATCACCGTAAAGTCAACAACTAAAAATC
 
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JMFN003H24+           TCGACCTCGGCAGGTTCCGCCGCCTACCGCCAGTCCCACGGTAAATAACCTCTACCCCTC
JMSF045D12-           TCGACCTCGGCAGGTTCCGCCGCCTACCGCCAGTCCCACGGTAAATAACCTCTACCCCTC
                      ____________________________________________________________
consensus             TCGACCTCGGCAGGTTCCGCCGCCTACCGCCAGTCCCACGGTAAATAACCTCTACCCCTC
 
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JMFN003H24+           TCTCACTCGTCCATTGCTCCACCGGAGGTTTTGACTACGGCCTTTCATCGCTGAAGTTTT
JMSF045D12-           TCTCACTCGTCCATTGCTCCACCGGAGGTTTTGACTACGGCCTTTCATCGCTGAAGTTTT
                      ____________________________________________________________
consensus             TCTCACTCGTCCATTGCTCCACCGGAGGTTTTGACTACGGCCTTTCATCGCTGAAGTTTT
 
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JMFN003H24+           GACTATGGAGGGGTGGTATTCTGATTTCGCTGGCCTTTCAT                   
JMSF045D12-           GACTATGGAGGGGTGGTATTCTGATTTCGCTGGCCTTTCATGGCTGAAGAATTAAGCACA
                      ____________________________________________________________
consensus             GACTATGGAGGGGTGGTATTCTGATTTCGCTGGCCTTTCATGGCTGAAGAATTAAGCACA
 
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JMSF045D12-           TGAGCTCGCATTGGCAAAACTGGGGTCAAGGAAGTCTCATTCTCTGCCATATAAATATCG
                      ____________________________________________________________
consensus             TGAGCTCGCATTGGCAAAACTGGGGTCAAGGAAGTCTCATTCTCTGCCATATAAATATCG
 
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JMSF045D12-           ATCTGTAAGTATTTTTCTATGGATTTTCAAGGGTTTTATTTGCACGCTCATCCATCTCAC
                      ____________________________________________________________
consensus             ATCTGTAAGTATTTTTCTATGGATTTTCAAGGGTTTTATTTGCACGCTCATCCATCTCAC
 
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JMSF045D12-           AACACCACACGACCAGACCACAACACCACACTGGCATGGTGACTCTTATTTTCAGACATA
                      ____________________________________________________________
consensus             AACACCACACGACCAGACCACAACACCACACTGGCATGGTGACTCTTATTTTCAGACATA
 
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JMSF045D12-           AATATGGTGCAGATCCACATTGTTTACAGATCACCTGTTTTTATAGGTCCTTCAGGGTCG
                      ____________________________________________________________
consensus             AATATGGTGCAGATCCACATTGTTTACAGATCACCTGTTTTTATAGGTCCTTCAGGGTCG
 
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JMSF045D12-           ATATGGTTATGAATTTCCACAGATCTTTGTGATCGGGACATGCATGTCTGATATATCAAC
                      ____________________________________________________________
consensus             ATATGGTTATGAATTTCCACAGATCTTTGTGATCGGGACATGCATGTCTGATATATCAAC
 
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JMSF045D12-           AGATCTGGGAATTTAACCACGATATGGTCAGATTTCAAACAGCATAATGAACAAATCTAA
                      ____________________________________________________________
consensus             AGATCTGGGAATTTAACCACGATATGGTCAGATTTCAAACAGCATAATGAACAAATCTAA
 
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JMSF045D12-           TGCCGTATTTGAAGTATATTCAAGATATCAGGATATATTATTATGGGTCTACATTTTAAT
rJMSF045D12+                                 GATATCAGGATATATTATTATGGGTCTACATTTTAAT
                      ____________________________________________________________
consensus             TGCCGTATTTGAAGTATATTCAAGATATCAGGATATATTATTATGGGTCTACATTTTAAT
 
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JMSF045D12-           AATTTTCGAATTTTTATTTTTAAAAATCTGGACTTAAAGTTCCAGACAACTTCTTTTTCC
rJMSF045D12+          AATTTTCGAATTTTTATTTTTAAAAATCTGGACTTAAAGTTCCAGACAACTTCTTTTTCC
                      ____________________________________________________________
consensus             AATTTTCGAATTTTTATTTTTAAAAATCTGGACTTAAAGTTCCAGACAACTTCTTTTTCC
 
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rJMSF045D12+          TCTCTTTTAAGAATTTACAGAGGTTCTGTCCTCAAACATGTTAGAACATTCAATCTAACA
                      ____________________________________________________________
consensus             TCTCTTTTAAGAATTTACAGAGGTTCTGTCCTCAAACATGTTAGAACATTCAATCTAACA
 
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rJMSF045D12+          TGTATTAGTGCAGCAAGCCGTATTAATGTCTATATGTATAATTTTTAACTAAATACAATT
                      ____________________________________________________________
consensus             TGTATTAGTGCAGCAAGCCGTATTAATGTCTATATGTATAATTTTTAACTAAATACAATT
 
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rJMSF045D12+          AAAAGGAATAAAAAGAGTACTATAATTACAGTTGGCATTTTCATGATTGGTTGATATACG
                      ____________________________________________________________
consensus             AAAAGGAATAAAAAGAGTACTATAATTACAGTTGGCATTTTCATGATTGGTTGATATACG
 
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rJMSF045D12+          GGTAAATATATATTCTTTCTCTAAATTTTAACTGTAACCACATGATAAAGAGATAGAGAA
                      ____________________________________________________________
consensus             GGTAAATATATATTCTTTCTCTAAATTTTAACTGTAACCACATGATAAAGAGATAGAGAA
 
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rJMSF045D12+          GGATTAAATAAGTGGTAACAACCATATATGCATATTTTCTAGAATTCTATTTTTTTCATA
                      ____________________________________________________________
consensus             GGATTAAATAAGTGGTAACAACCATATATGCATATTTTCTAGAATTCTATTTTTTTCATA
 
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rJMSF045D12+          AGAAAGTTGAAGAGGATATGTAAAGCTTTAGCAGATTGTGCAGGTGTTCTCACCTTAATT
                      ____________________________________________________________
consensus             AGAAAGTTGAAGAGGATATGTAAAGCTTTAGCAGATTGTGCAGGTGTTCTCACCTTAATT
 
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rJMSF045D12+          TTCAAGAAACTGTGTTCTTCATGTGTTCCTCCTCGTGGATGCTTTCCAAGGTGTATCAGA
                      ____________________________________________________________
consensus             TTCAAGAAACTGTGTTCTTCATGTGTTCCTCCTCGTGGATGCTTTCCAAGGTGTATCAGA
 
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rJMSF045D12+          AGTGCATCACAGGAGAATATGGGTGTGCATCTTCATATCAACAAAGCTTCTTCATATCAA
                      ____________________________________________________________
consensus             AGTGCATCACAGGAGAATATGGGTGTGCATCTTCATATCAACAAAGCTTCTTCATATCAA
 
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rJMSF045D12+          CAAAGCTTTATAGAGAGGCTGAAGATGTAGTGCTGTGTATTGAACAATGAAGATGGATTT
                      ____________________________________________________________
consensus             CAAAGCTTTATAGAGAGGCTGAAGATGTAGTGCTGTGTATTGAACAATGAAGATGGATTT
 
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rJMSF045D12+          ATGTCTTGAAAATATGAAGACTGAGCAAAACGTTTCATAGTCCAAGGCAATTAATACTCT
                      ____________________________________________________________
consensus             ATGTCTTGAAAATATGAAGACTGAGCAAAACGTTTCATAGTCCAAGGCAATTAATACTCT
 
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rJMSF045D12+          TTCCTTTCACATATACAAAGGCGTAAACAATCTGAATACTACCCTTTTTAAAATAAGGTT
                      ____________________________________________________________
consensus             TTCCTTTCACATATACAAAGGCGTAAACAATCTGAATACTACCCTTTTTAAAATAAGGTT