Contig 007207:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF003C06Sequence699007207 (19)ref|XP_009761655.1|6e-54PREDICTED: mitochondrial amidoxime reducing component 2-like isoform X2 [Nicoti
JMFF009B01Sequence502007207 (19)ref|XP_006340075.1|5e-56PREDICTED: MOSC domain-containing protein 2, mitochondrial-like isoform X1 [Sol646007207 (19)ref|XP_009761655.1|2e-78PREDICTED: mitochondrial amidoxime reducing component 2-like isoform X2 [Nicoti
JMFF029B12Sequence515007207 (19)ref|XP_006340075.1|6e-59PREDICTED: MOSC domain-containing protein 2, mitochondrial-like isoform X1 [Sol750007207 (19)ref|XP_009605928.1|1e-102PREDICTED: mitochondrial amidoxime reducing component 2-like isoform X2 [Nicoti
JMFF030K19Sequence380007207 (19)ref|XP_006340076.1|4e-32PREDICTED: MOSC domain-containing protein 2, mitochondrial-like isoform X2 [Sol
JMFF045C16Sequence664007207 (19)ref|XP_006340075.1|3e-87PREDICTED: MOSC domain-containing protein 2, mitochondrial-like isoform X1 [Sol628007207 (19)ref|XP_009761655.1|1e-39PREDICTED: mitochondrial amidoxime reducing component 2-like isoform X2 [Nicoti
JMFF045F09Sequence615007207 (19)ref|XP_006340075.1|1e-77PREDICTED: MOSC domain-containing protein 2, mitochondrial-like isoform X1 [Sol621007207 (19)ref|XP_009761655.1|1e-54PREDICTED: mitochondrial amidoxime reducing component 2-like isoform X2 [Nicoti
JMFF048F08Sequence357007207 (19)ref|XP_002273557.1|7e-15PREDICTED: mitochondrial amidoxime-reducing component 1 [Vitis vinifera] emb|CB581007207 (19)ref|XP_009761655.1|3e-04PREDICTED: mitochondrial amidoxime reducing component 2-like isoform X2 [Nicoti
JMFF048H08Sequence434007207 (19)ref|XP_006340075.1|3e-44PREDICTED: MOSC domain-containing protein 2, mitochondrial-like isoform X1 [Sol299007207 (19)
JMSF018D08Sequence510007207 (19)ref|XP_006340075.1|5e-55PREDICTED: MOSC domain-containing protein 2, mitochondrial-like isoform X1 [Sol724007207 (19)ref|XP_009605928.1|6e-105PREDICTED: mitochondrial amidoxime reducing component 2-like isoform X2 [Nicoti
JMSF023L23Sequence621013983 (4)ref|XP_006350516.1|1e-93PREDICTED: thylakoid lumenal 17.4 kDa protein, chloroplastic-like [Solanum tube589007207 (19)ref|XP_009605928.1|4e-57PREDICTED: mitochondrial amidoxime reducing component 2-like isoform X2 [Nicoti
JMSF042E07Sequence771007207 (19)ref|XP_006340075.1|4e-112PREDICTED: MOSC domain-containing protein 2, mitochondrial-like isoform X1 [Sol713007207 (19)ref|XP_009761655.1|6e-60PREDICTED: mitochondrial amidoxime reducing component 2-like isoform X2 [Nicoti

Alignment

This contig is upended


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JMSF018D08-           GGATGTTCATTATACTCCTGAGCTCACCAGAAATTATTCAGAGAGGAGGAAGAAGAAGAA
JMFF009B01-                          TCCTGAGCTCACCAGAAATTATTCAGAGAGGAGGAAGAAGAAGAA
JMFF048H08-                                                  AGAGAGGAGGAAGAAGAAGAA
JMFF029B12-                          TCCTGAGCTCACCAGAAATTATTCAGAGAGGAGGAAGAAGAAGAA
JMFF030K19-               GTTCATTATACTCCTGAGCTCACCAGAAATTATTCAGAGAGGAGGAAGAAGAAGAA
JMFF045F09-               GTTCATTATACTCCTGAGCTCACCAGAAATTATTCAGAGAGGAGGAAGAAGAAGAA
JMFF045C16-               GTTCATTATACTCCTGAGCTCACCAGAAATTATTCAGAGAGGAGGAAGAAGAAGAA
JMSF042E07-               GTTCATTATACTCCTGAGCTCACCAGAAATTATTCAGAGAGGAGGAAGAAGAAGAA
                      ____________________________________________________________
consensus             GGATGTTCATTATACTCCTGAGCTCACCAGAAATTATTCAGAGAGGAGGAAGAAGAAGAA
 
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JMSF018D08-           GAAGAAAAAGTAGTTGTTTCGTCGATTGAAAGAAATTACTCAAACATGAGCTTAACTGGC
JMFF009B01-           GAAGAAAAAGTAGTTGTTTCGTCGATTGAAAGAAATTACTCAAACATGAGCTTAACTGGC
JMFF048H08-           GAAGAAAAAGTAGTTGTTTCGTCGATTGAAAGAAATTACTCAAACATGAGCTTAACTGGC
JMFF029B12-           GAAGAAAAAGTAGTTGTTTCGTCGATTGAAAGAAATTACTCAAACATGAGCTTAACTGGC
JMFF030K19-           GAAGAAAAAGTAGTTGTTTCGTCGATTGAAAGAAATTACTCAAACATGAGCTTAACTGGC
JMFF045F09-           GAAGAAAAAGTAGTTGTTTCGTCGATTGAAAGAAATTACTCAAACATGAGCTTAACTGGC
JMFF045C16-           GAAGAAAAAGTAGTTGTTTCGTCGATTGAAAGAAATTACTCAAACATGAGCTTAACTGGC
JMSF042E07-           GAAGAAAAAGTAGTTGTTTCGTCGATTGAAAGAAATTACTCAAACATGAGCTTAACTGGC
                      ____________________________________________________________
consensus             GAAGAAAAAGTAGTTGTTTCGTCGATTGAAAGAAATTACTCAAACATGAGCTTAACTGGC
 
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JMSF018D08-           CTAATTGGCCGTCTTTTAGGGAAGGAAGAAAGGATGGAGGATTGTGAAGAAGCAGCGAAA
JMFF009B01-           CTAATTGGCCGTCTTTTAGGGAAGGAAGAAAGGATGGAGGATTGTGAAGAAGCAGCGAAA
JMFF048H08-           CTAATTGGCCGTCTTTTAGGGAAGGAAGAAAGGATGGAGGATTGTGAAGAAGCAGCGAAA
JMFF029B12-           CTAATTGGCCGTCTTTTAGGGAAGGAAGAAAGGATGGAGGATTGTGAAGAAGCAGCGAAA
JMFF030K19-           CTAATTGGCCGTCTTTTAGGGAAGGAAGAAAGGATGGAGGATTGTGAAGAAGCAGCGAAA
JMFF045F09-           CTAATTGGCCGTCTTTTAGGGAAGGAAGAAAGGATGGAGGATTGTGAAGAAGCAGCGAAA
JMFF045C16-           CTAATTGGCCGTCTTTTAGGGAAGGAAGAAAGGATGGAGGATTGTGAAGAAGCAGCGAAA
JMSF042E07-           CTAATTGGCCGTCTTTTAGGGAAGGAAGAAAGGATGGAGGATTGTGAAGAAGCAGCGAAA
                      ____________________________________________________________
consensus             CTAATTGGCCGTCTTTTAGGGAAGGAAGAAAGGATGGAGGATTGTGAAGAAGCAGCGAAA
 
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JMSF018D08-           GTGGAATCAATGTGGATATACCCTGTCAAATCATGCCGTGGAATTTCCGTTTCTGAAGCA
JMFF009B01-           GTGGAATCAATGTGGATATACCCTGTCAAATCATGCCGTGGAATTTCCGTTTCTGAAGCA
JMFF048H08-           GTGGAATCAATGTGGATATACCCTGTCAAATCATGCCGTGGAATTTCCGTTTCTGAAGCA
JMFF048F08-                          ATATACCCTGTCTGATCATGCCGGGCAAATTCCGCTTCTGTAACA
JMFF029B12-           GTGGAATCAATGTGGATATACCCTGTCAAATCATGCCGTGGAATTTCCGTTTCTGAAGCA
JMFF030K19-           GTGGAATCAATGTGGATATACCCTGTCAAATCATGCCGTGGAATTTCCGTTTCTGAAGCA
JMFF045F09-           GTGGAATCAATGTGGATATACCCTGTCAAATCATGCCGTGGAATTTCCGTTTCTGAAGCA
JMFF045C16-           GTGGAATCAATGTGGATATACCCTGTCAAATCATGCCGTGGAATTTCCGTTTCTGAAGCA
JMSF042E07-           GTGGAATCAATGTGGATATACCCTGTCAAATCATGCCGTGGAATTTCCGTTTCTGAAGCA
                      ____________________________________________________________
consensus             GTGGAATCAATGTGGATATACCCTGTCAAATCATGCCGTGGAATTTCCGTTTCTGAAGCA
 
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JMSF018D08-           CCCATCTGTTCTACTGGATTCCGGTGGGATCGTCTATGGATGGTGGTGAATTCAGGAGGC
JMFF009B01-           CCCATCTGTTCTACTGGATTCCGGTGGGATCGTCTATGGATGGTGGTGAATTCAGGAGGC
JMFF048H08-           CCCATCTGTTCTACTGGATTCCGGTGGGATCGTCTATGGATGGTGGTGAATTCAGGAGGC
JMFF048F08-           CCCATCTGTTCTACTGGATTCCGGTGGGATCGTCTATGGATGGAGGTGAATTCAGGAGGC
JMFF029B12-           CCCATCTGTTCTACTGGATTCCGGTGGGATCGTCTATGGATGGTGGTGAATTCAGGAGGC
JMFF030K19-           CCCATCTGTTCTACTGGATTCCGGTGGGATCGTCTATGGATGGTGGTGAATTCAGGAGGC
JMFF045F09-           CCCATCTGTTCTACTGGATTCCGGTGGGATCGTCTATGGATGGTGGTGAATTCAGGAGGC
JMFF045C16-           CCCATCTGTTCTACTGGATTCCGGTGGGATCGTCTATGGATGGTGGTGAATTCAGGAGGC
JMSF042E07-           CCCATCTGTTCTACTGGATTCCGGTGGGATCGTCTATGGATGGTGGTGAATTCAGGAGGC
                      ____________________________________________________________
consensus             CCCATCTGTTCTACTGGATTCCGGTGGGATCGTCTATGGATGGTGGTGAATTCAGGAGGC
 
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JMSF018D08-           AGAGCGTGCACGCAAAGAGTTGAGCCAAGTCTCGCCCTCGTTGAAGTGGAGCTGCCGCGC
JMFF009B01-           AGAGCGTGCACGCAAAGAGTTGAGCCAAGTCTCGCCCTCGTTGAAGTGGAGCTGCCGCGC
JMFF048H08-           AGAGCGTGCACGCAAAGAGTTGAGCCAAGTCTCGCCCTCGTTGAAGTGGAGCTGCCGCGC
JMFF048F08-           AGAGCGTGC                                                   
JMFF029B12-           AGAGCGTGCACGCAAAGAGTTGAGCCAAGTCTCGCCCTCGTTGAAGTGGAGCTGCCGCGC
JMFF030K19-           AGAGCGTGCACGCAAAGAGTTGAGCCAAGTCTCGCCCTCGTTGAAGTGGAGCTGCCGCGC
JMFF045F09-           AGAGCGTGCACGCAAAGAGTTGAGCCAAGTCTCGCCCTCGTTGAAGTGGAGCTGCCGCGC
JMFF045C16-           AGAGCGTGCACGCAAAGAGTTGAGCCAAGTCTCGCCCTCGTTGAAGTGGAGCTGCCGCGC
JMSF042E07-           AGAGCGTGCACGCAAAGAGTTGAGCCAAGTCTCGCCCTCGTTGAAGTGGAGCTGCCGCGC
                      ____________________________________________________________
consensus             AGAGCGTGCACGCAAAGAGTTGAGCCAAGTCTCGCCCTCGTTGAAGTGGAGCTGCCGCGC
 
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JMSF018D08-           GACGCCTTCTGCGAGGGTTGGGAGCCGAAAAACGGCTCGTTTTTAGAGATAAGGGCTCCT
JMFF009B01-           GACGCCTTCTGCGAGGGTTGGGAGCCGAAAAACGGCTCGTTTTTANAGATAAGGGCTCCT
JMFF048H08-           GACGCCTTCTGCGAGGGTTGGGAGCCGAAAAACGGCTCGTTTTTAGAGATAAGGGCTCCT
JMFF029B12-           GACGCCTTCTGCGAGGGTTGGGAGCCGAAAAACGGCTCGTTTTTAGAGATAAGGGCTCCT
JMFF030K19-           GACGCCTTCTGCGAGGGTTGGGAG                                    
JMFF045F09-           GACGCCTTCTGCGAGGGTTGGGAGCCGAAAAACGGCTCGTTTTTAGAGATAAGGGCTCCT
JMFF045C16-           GACGCCTTCTGCGAGGGTTGGGAGCCGAAAAACGGCTCGTTTTTAGAGATAAGGGCTCCT
JMSF042E07-           GACGCCTTCTGCGAGGGTTGGGAGCCGAAAAACGGCTCGTTTTTAGAGATAAGGGCTCCT
                      ____________________________________________________________
consensus             GACGCCTTCTGCGAGGGTTGGGAGCCGAAAAACGGCTCGTTTTTAGAGATAAGGGCTCCT
 
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JMSF018D08-           GGTATGGATGCTCTCAAGGTCCCATTGATTGAACCTTCCACTGTATCTGATGGTATCTCT
JMFF009B01-           GGTATGGATGCTCTCAAGGTCCCATTGATTGAACCTTCCACTGTATCTGATGGTATCTCT
JMFF048H08-           GGTATGGATGCTCTCAAGGTCCCATTGATTGAACCCTTCCCTGTATCTGATG        
JMFF029B12-           GGTATGGATGCTCTCAAGGTCCCATTGATTGAACCTTCCACTGTATCTGATGGTATCTCT
JMFF045F09-           GGTATGGATGCTCTCAAGGTCCCATTGATTGAACCTTCCACTGTATCTGATGGTATCTCT
JMFF045C16-           GGTATGGATGCTCTCAAGGTCCCATTGATTGAACCTTCCACTGTATCTGATGGTATCTCT
JMSF042E07-           GGTATGGATGCTCTCAAGGTCCCATTGATTGAACCTTCCACTGTATCTGATGGTATCTCT
rJMSF018D08+                                             TTCCACTGTATCTGATGGTATCTCT
rJMFF029B12+                                                      ATCTGATGGTATCTCT
                      ____________________________________________________________
consensus             GGTATGGATGCTCTCAAGGTCCCATTGATTGAACCTTCCACTGTATCTGATGGTATCTCT
 
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JMSF018D08-           GTATGGGAATGGTCTGGCTCGGCTTTGGAT                              
JMFF009B01-           GTATGGGAATGGTCTGGCTCTGCTTTGGATGANGGAG                       
JMFF029B12-           GTATGGGAATGGTCTGGCTCTGCTTTGGATGAGGGAGATGAAGCAGCAGA          
JMFF045F09-           GTATGGGAATGGTCTGGCTCTGCTTTGGATGAGGGAGATGAAGCAGCAGAGTGGTTCACC
JMFF045C16-           GTATGGGAATGGTCTGGCTCTGCTTTGGATGAGGGAGATGAAGCAGCAGAGTGGTTCACC
JMSF042E07-           GTATGGGAATGGTCTGGCTCTGCTTTGGATGAGGGAGATGAAGCAGCAGAGTGGTTCACC
rJMSF018D08+          GTATGGGAATGGTCTGGCTCGGCTTTGGATGAGGGAGATGAAGCAGCAGAGTGGTTCACC
rJMFF029B12+          GTATGGGAATGGTCTGGCTCTGCTTTGGATGAGGGAGATGAAGCAGCAGAGTGGTTCACC
                      ____________________________________________________________
consensus             GTATGGGAATGGTCTGGCTCTGCTTTGGATGAGGGAGATGAAGCAGCAGAGTGGTTCACC
 
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JMFF045F09-           AAGTATCTTGGGAAACCTTGCCGGCTAGTGCGCTTTCATGAAGCATCACAGACTANGCCT
JMFF045C16-           AAGTATCTTGGGAAACCTTGCCGGCTAGTGCGCTTTCATGAAGCATCACAGACTAGGCCT
JMSF042E07-           AAGTATCTTGGGAAACCTTGCCGGCTAGTGCGCTTTCATGAAGCATCACAGACTAGGCCT
rJMSF018D08+          AAGTATCTTGGGAAACCTTGCCGGCTAGTGCGCTTTCATGAAGCATCACAGACTAGGCCT
rJMFF029B12+          AAGTATCTTGGGAAACCTTGCCGGCTAGTGCGCTTTCATGAAGCATCACAGACTAGGCCT
rJMFF009B01+                                      TGCGCTTTCATGAAGCATCACAGACTAGGCCT
                      ____________________________________________________________
consensus             AAGTATCTTGGGAAACCTTGCCGGCTAGTGCGCTTTCATGAAGCATCACAGACTAGGCCT
 
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JMFF045F09-           GTGGACCCCAACTATGGCG                                         
JMFF045C16-           GTGGACCCCCACTATGGCGCTGGCCACNAGATTAAGTTTAATGATGCCTATCCAATTCTT
JMSF042E07-           GTGGACCCCAACTATGGCGCTGGCCACAAGATTAAGTTTAATGATGCCTATCCAATTCTT
rJMSF018D08+          GTGGACCCCAACTATGGCGCTGGCCACAAGATTAAGTTTAATGATGCCTATCCAATTCTT
rJMFF029B12+          GTGGACCCCAACTATGGCGCTGGCCACAAGATTAAGTTTAATGATGCCTATCCAATTCTT
rJMFF009B01+          GTGGACCCCAACTATGGCGCTGGCCACAAGATTAAGTTTAATGATGCCTATCCAATTCTT
rJMSF023L23+                                                                  TCTT
rJMFF003C06+             GACCCCAACTATGGCGCTGGCCACAAGATTAAGTTTAATGATGCCTATCCAATTCTT
                      ____________________________________________________________
consensus             GTGGACCCCAACTATGGCGCTGGCCACAAGATTAAGTTTAATGATGCCTATCCAATTCTT
 
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JMFF045C16-           CTTGCA                                                      
JMSF042E07-           CTTGCATCCCAGAAATCACTGGATGTTTTAAACGAGCAGATGAAGGAGCCTGTTTCTATG
rJMSF018D08+          CTTGCATCCCAGAAATCACTGGATGTTTTAAACGAGCAGATGAAGGAGCCTGTTTCTATG
rJMFF029B12+          CTTGCATCCCAGAAATCACTGGATGTTTTAAACGAGCAGATGAAGGAGCCTGTTTCTATG
rJMFF009B01+          CTTGCATCCCAGAAATCACTGGATGTTTTAAACGAGCAGATGAAGGAGCCTGTTTCTATG
rJMSF023L23+          CTTGCATCCCAGAAATCANTGGATGTTTTAAACGAGCAGANGAAGGAGCCTGTTTCTATG
rJMFF003C06+          CTTGCATCCCAGAAATCACTGGATGTTTTAAACGAGCAGATGAAGGAGCCTGTTTCTATG
rJMFF045F09+                                          CGAGCAGATGAAGGAGCCTGTTTCTATG
rJMFF045C16+                                         ACGAGCAGATGAAGGAGCCTGTTTCTATG
rJMSF042E07+              CATCCCAGAAATCACTGGATGTTTTAAACGAGCAGATGAAGGAGCCTGTTTCTATG
                      ____________________________________________________________
consensus             CTTGCATCCCAGAAATCACTGGATGTTTTAAACGAGCAGATGAAGGAGCCTGTTTCTATG
 
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JMSF042E07-           AATCGCTTTAGACCCAACATTCTTGTTGATGGATGTGAACCGTATGCTGAAGATT     
rJMSF018D08+          AATCGCTTTAGACCCAACATTCTTGTTGATGGATGTGAACCGTATGCTGAAGATTTTTGG
rJMFF029B12+          AATCGCTTTAGACCCAACATTCTTGTTGATGGATGTGAACCGTATGCTGGAGATTTTTGG
rJMFF009B01+          AATCGCTTTAGACCCAACATTCTTGTTGATGGATGTGAACCGTATGCTGGAGATTTTTGG
rJMSF023L23+          AATCGCTTTAGACCCAACATTCTTGNNGATGGATGTGAACCGTATGNTGAAGATTTTTGG
rJMFF003C06+          AATCGCTTTAGACCCAACATTCTTGTTGATGGATGTGAACCGTAT-CTGAAGATTTTTGG
rJMFF045F09+          AATCGCTTTAGACCCAACATTCTTGTTGATGGATGTGAACCGTATGCTGAAGATTTTTGG
rJMFF045C16+          AATCGCTTTAGACCCAACATTCTTGTTGATGGATGTGAACCGTAT-CTGAAGATTTTTGG
rJMSF042E07+          AATCGCTTTAGACCCAACATTCTTGTTGATGGATGTGAACCGTATGCTGAAGATTTTTGG
                      ____________________________________________________________
consensus             AATCGCTTTAGACCCAACATTCTTGTTGATGGATGTGAACCGTATGCTGAAGATTTTTGG
 
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rJMSF018D08+          AAAGAGATCAAGATAAACGGGTTAACATATAATAGCGCACAACTATGTTACCGCTGTAAG
rJMFF029B12+          AAAGAGATCAAGATAAACGGGTTAACATATAATAGCGCACAACTATGTTACCGCTGTAAG
rJMFF009B01+          AAAGAGATCAAGATAAACGGGTTAACATATAATAGCGCACAACTATGTTACCGCTGTAAG
rJMSF023L23+          AAAGAGATCAAGATAAACGGGTTAACATATAATAGCGCACAACTATGTNACCGCTGTAAG
rJMFF003C06+          AAAGAGATCAAGATAAACGGGTTAACATATAATAGCGCACAACTATGTTACCGCTGTAAG
rJMFF045F09+          AAAGAGATCAAGATAAACGGGTTAACATATAATAGCGCACAACTATGTTACCGCTGTAAG
rJMFF045C16+          AAAGAGATCAAGATAAACGGGTTAACATATAATAGCGCACAACTATGTTACCGCTGTAAG
rJMSF042E07+          AAAGAGATCAAGATAAACGGGTTAACATATAATAGCGCACAACTATGTTACCGCTGTAAG
                      ____________________________________________________________
consensus             AAAGAGATCAAGATAAACGGGTTAACATATAATAGCGCACAACTATGTTACCGCTGTAAG
 
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rJMSF018D08+          ATACCTAGAGTTAATCAAGAAACAGCAGAAGTAGGCGCTGAGCCAAATGAAACTCTTACT
rJMFF029B12+          ATACCTAGAGTTAATCAAGAAACAGCAGAAGTAGGCGCTGAGCCAAATGAAACTCTTACT
rJMFF009B01+          ATACCTAGAGTTAATCAAGAAACAGCAGAAGTAGGCGCTGAGCCAAATGAAACTCTTACT
rJMSF023L23+          ATACCTAGAGTTAATCAAGAAACAGCAGAAGTAGGCGCTGAGCCAAATGAAACTCTTACT
rJMFF003C06+          ATACCTAGAGTTAATCAAGAAACAGCAGAAGTAGGCGCTGAGCCAAATGAAACTCTTACT
rJMFF045F09+          ATACCTAGAGTTAATCAAGAAACAGCAGAAGTAGGCGCTGAGCCAAATGAAACTCTTACT
rJMFF045C16+          ATACCTAGAGTTAATCAAGAAACAGCAGAAGTAGGCGCTGAGCCAAATGAAACTCTTACT
rJMSF042E07+          ATACCTAGAGTTAATCAAGAAACAGCAGAAGTAGGCGCTGAGCCAAATGAAACTCTTACT
                      ____________________________________________________________
consensus             ATACCTAGAGTTAATCAAGAAACAGCAGAAGTAGGCGCTGAGCCAAATGAAACTCTTACT
 
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rJMSF018D08+          AAGTTCCGCTCAAGTGAGAACTTGCATCCCGATAAAAAACCACATGGAAGGGTGTACTTC
rJMFF029B12+          AAGTTCCGCTCAAGTGAGAACTTGCATCCCGATAAAAAACCACATGGAAGGGTGTACTTC
rJMFF009B01+          AAGTTCCGCTCAAGTGAGAACTTGCATCCCGATAAAAAACCACATGGAAGGGTGTACTTC
rJMSF023L23+          AAGTTCCGCTCAAGTGAGAACTTGCATCCCGATAAAAANCCACATGGAAGGGTGTACTTC
rJMFF003C06+          AAGTTCCGCTCAAGTGAGAACTTGCATCCCGATAAAAAACCACATGGAAGGGTGTACTTC
rJMFF045F09+          AAGTTCCGCTCAAGTGAGAACTTGCATCCCGATAAAAAACCACATGGAAGGGTGTACTTC
rJMFF048F08+                                                                   TTC
rJMFF045C16+          AAGTTCCGCTCAAGTGAGAACTTGCATCCCGATAAAAAACCACATGGAAGGGTGTACTTC
rJMSF042E07+          AAGTTCCGCTCAAGTGAGAACTTGCATCCCGATAAAAAACCACATGGAAGGGTGTACTTC
                      ____________________________________________________________
consensus             AAGTTCCGCTCAAGTGAGAACTTGCATCCCGATAAAAAACCACATGGAAGGGTGTACTTC
 
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rJMSF018D08+          GGACAGACTTTCGTTTGTAATGATTGGGATGCTCGAGGAAAACCAAAAACCATTAAGGTG
rJMFF029B12+          GGACAGACTTTCGTTTGTAATGATTGGGATGCTCGAGGAAAACCAAAAACCATTAAGGTG
rJMFF009B01+          GGACAGACTTTCGTTTGTAATGATTGGGATGCTCGAGGAAAACCAAAAACCATTAAGGTG
rJMSF023L23+          GGACAGACTTTCGTTTGTAATGATTGGGATGCTCGAGGAAAACCAAAAACCATTAAGGTG
rJMFF003C06+          GGACAGACTTTCGTTTGTAATGATTGGGATGCTCGAGGAAAACCAAAAACCATTAAGGTG
rJMFF045F09+          GGACAGACTTTCGTTTGTAATGATTGGGATGCTCGAGGAAAACCAAAAACCATTAAGGTG
rJMFF048F08+          GCACAGACTTTCGTTTGTAATGATTGGGAAGCTCGACGAAAACCAAAACCCTTTTAGGGG
rJMFF045C16+          GGACAGACTTTCGTTTGTAATGATTGGGATGCTCGAGGAAAACCAAAAACCATTAAGGTG
rJMSF042E07+          GGACAGACTTTCGTTTGTAATGATTGGGATGCTCGAGGAAAACCAAAAACCATTAAGGTG
                      ____________________________________________________________
consensus             GGACAGACTTTCGTTTGTAATGATTGGGATGCTCGAGGAAAACCAAAAACCATTAAGGTG
 
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rJMSF018D08+          GGAGATCCAGTTTATGTCCTCAAGATGGTCTCTTCCTATGGTGATGTTGCAGTTTGAACT
rJMFF029B12+          GGAGATCCAGTTTATGTCCTCAAGATGGTCTCTTCCTATGGTGATGTTGCAGTTTGAACT
rJMFF009B01+          GGAGATCCAGTTTATGTCCTCAAGATGGTCTCTTCCTATGGTGATGTTGCAGTTTGAACT
rJMSF023L23+          GGAGATCCAGTTTATGTCCTCAAGATGGTCTCTTCCTATGNTGATGNTGCAGTTTGNACT
rJMFF003C06+          GGAGATCCAGTTTATGTCCTCAAGATGGTCTCTTCCTATGGTGATGTTGCAGTTTGAACT
rJMFF045F09+          GGAGATCCAGTTTATGTCCTCAAGATGGTCTCTTCCTATGGTGATGTTGCAGTTTGAACT
rJMFF048F08+          GGAGATCCAGTTTGGGTCCTCAAGATGGTCTTTTCGTATGGGGATGTTGCAGTTTGAACT
rJMFF045C16+          GGAGATCCAGTTTATGTCCTCAAGATGGTCTCTTCCTATGGTGATGTTGCAGTTTGAACT
rJMFF048H08+                          TCCTCAAGATGGTCTCTTCCTATGGTGATGTTGCAGTTTGAACT
rJMSF042E07+          GGAGATCCAGTTTATGTCCTCAAGATGGTCTCTTCCTATGGTGATGTTGCAGTTTGAACT
                      ____________________________________________________________
consensus             GGAGATCCAGTTTATGTCCTCAAGATGGTCTCTTCCTATGGTGATGTTGCAGTTTGAACT
 
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rJMSF018D08+          CCAATCTCTTTCAATGTTGATGAAATGAAACCATTTCCCATGGCTTA-AGATTTACCATA
rJMFF029B12+          CCAATCTCTTTCAATGTTGATGAAATGAAACCATTTCCCATGGCTTA-AGATTTACCATA
rJMFF009B01+          CCAATCTCTTTCAATGTTGATGAAATGAAACCATTTCCCATGGCTTA-AGATTTACCATA
rJMSF023L23+          CCAATCTCTTTCAATGTTGATGAAATGAAACCATTTCCCATGGCNTACAGATTTACCATA
rJMFF003C06+          CCAATCTCTTTCAATGTTGATGAAATGAAACCATTTCCCATGGCTTA-AGATTTACCATA
rJMFF045F09+          CCAATCTCTTTCAATGTTGATGAAATGAAACCATTTCCCATGGCTTA-AGATTTACCATA
rJMFF048F08+          CCACTCTCTTTCAATGTTGGGGAAATGAAACCATTTCCCACGGCTTA-AGATTTTCCATA
rJMFF045C16+          CCAATCTCTTTCAATGTTGATGAAATGAAACCATTTCCCATGGCTTA-AGATTTACCATA
rJMFF048H08+          CCAATCTCTTTCAATGTTGGTGAAATGAAACCATTTCCCATGGCTTA-AGATTTACCATA
rJMSF042E07+          CCAATCTCTTTCAATGTTGATGAAATGAAACCATTTCCCATGGCTTA-AGATTTACCATA
                      ____________________________________________________________
consensus             CCAATCTCTTTCAATGTTGATGAAATGAAACCATTTCCCATGGCTTA-AGATTTACCATA
 
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rJMSF018D08+          AACATTTTACCCGTTTCACTGT-TTGTTACTCTTCC                        
rJMFF029B12+          AACATTTTACCCGTTTCACTGT-TTGTTACTCTTCCA-GTTTGTACTTGTATTAAGTGAT
rJMFF009B01+          AACATTTTACCCGTTTCACTGT-TTGTTACTCTTCCA-GTTTGTACTTGTATTAAGTGAT
rJMSF023L23+          AACATTTTACCCGTTTCACTGT-TTGTTACTCTNCCACGNTTGTACTTGTATTAAGTGAT
rJMFF003C06+          AACATTTTACCCGTTTCACTGT-TTGTTACTCTTCCA-GTTTGTACTTGTATTAAGTGAT
rJMFF045F09+          AACATTTTACCCGTTTCACTGT-TTGTTACTCTTCCA-GTTTGTACTTGTATTAAGTGAT
rJMFF048F08+          AACATTTTACCCGTTTCACTGTGTTGTTTCTATTCCA-GTTTGTTCTTCTATTAAGTGAG
rJMFF045C16+          AACATTTTACCCGTTTCACTGT-TTGTTACTCTTCCA-GTTTGTACTTGTATTAAGTGAT
rJMFF048H08+          AACATTTTACCCGTTTCACTGT-TTGTTACTCTTCCA-GTTTGTACTTGTATTAAGTGAT
rJMSF042E07+          AACATTTTACCCGTTTCACTGT-TTGTTACTCTTCCA-GTTTGTACTTGTATTAAGTGAT
                      ____________________________________________________________
consensus             AACATTTTACCCGTTTCACTGT-TTGTTACTCTTCCA-GTTTGTACTTGTATTAAGTGAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF029B12+          GTGGAAAAATTAAAATT                                           
rJMFF009B01+          GTGGAAAAATTAAAATT                                           
rJMSF023L23+          GTGGAAAAATTAAAATTGTAGTCGTGTGGTATATAATCTT                    
rJMFF003C06+          GTGGAAAAATTAAAATTGTAGTTGTGTGGTATATAATCTTTTCATCAACTGCGATATTTT
rJMFF045F09+          GTGGAAAAATTAAAATTGTAGTTGTGTGGTATATAATCTTTTCATCAACTGCGATATTTT
rJMFF048F08+          GTGGAAAAACTAAAATTGTAGTTGTGTGGTATATAATCTTTTCATCA             
rJMFF045C16+          GTGGAAAAATTAAAATTGTAGTTGTGTGGTATATAATCTTTTCATCAACTGCGATATTTT
rJMFF048H08+          GTGGAAAAATTAAAATTGTAGTTGTGTGGTATATAATCTTTTCATCAACTGCGATATTTT
rJMSF042E07+          GTGGAAAAATTAAAATTGTAGTTGTGTGGTATATAATCTTTTCATCAACTGCGATATTTT
                      ____________________________________________________________
consensus             GTGGAAAAATTAAAATTGTAGTTGTGTGGTATATAATCTTTTCATCAACTGCGATATTTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF003C06+          CATAACGTCTTTGTAATAATGTTTTAAGAGAAATTCTATTT                   
rJMFF045F09+          CATAACGTCTTTGTAATAATGTTTTAAGAGAAATTCTATTTTCACGAAA           
rJMFF045C16+          CATAACGTCTTTGTAATAATGTTTTAAGAGAAATTCTATTTTCACGAAA           
rJMFF048H08+          CATAACGTCTTTGTAATAATGTTTTAAGAGAAATTCTATTTTCACGAAA           
rJMSF042E07+          CATAACGTCTTTGTAATAATGTTTTAAGAGAAATTCTATTTTCACGAAATTTTGCCACAA
                      ____________________________________________________________
consensus             CATAACGTCTTTGTAATAATGTTTTAAGAGAAATTCTATTTTCACGAAATTTTGCCACAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF042E07+          CTAGAAAAGTCACACAACTTGCAACGAAAAGTTGCAATCAAACATGTCCGTTTCAAACTT
                      ____________________________________________________________
consensus             CTAGAAAAGTCACACAACTTGCAACGAAAAGTTGCAATCAAACATGTCCGTTTCAAACTT