Contig 007204:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF041I21Sequence810002486 (2)ref|XP_011086006.1|2e-105PREDICTED: uncharacterized protein YNL011C [Sesamum indicum]704007204 (2)ref|XP_009775904.1|6e-74PREDICTED: uncharacterized protein YNL011C isoform X2 [Nicotiana sylvestris]
JMSF051N24Sequence652002486 (2)ref|XP_011086006.1|7e-72PREDICTED: uncharacterized protein YNL011C [Sesamum indicum]724007204 (2)ref|XP_009775904.1|2e-81PREDICTED: uncharacterized protein YNL011C isoform X2 [Nicotiana sylvestris]

Alignment

This contig is upended


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rJMSF051N24+                                                 TGAGGTTTTCCCTGCTGTAAA
                      ____________________________________________________________
consensus                                                    TGAGGTTTTCCCTGCTGTAAA
 
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rJMSF051N24+          TCCAACGGTCTTGGAAAAGNTGAGAAATGCAGACTGCATCGTATTTGCCATGGGATCGCT
rJMSF041I21+                         AAAGTTGAGAAATGCAGACTGCATCGTATTTGCCATGGGATCGCT
                      ____________________________________________________________
consensus             TCCAACGGTCTTGGAAAAGTTGAGAAATGCAGACTGCATCGTATTTGCCATGGGATCGCT
 
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rJMSF051N24+          CTTTACTTCCATCTGCCCTTCTCTGGTTTTACTCGGAGTTGGGGAAGCCATCGCTTCACG
rJMSF041I21+          CTTTACTTCCATCTGCCCTTCTCTGGTTTTACTCGGAGTTGGGGAAGCCATCGCTTCACG
                      ____________________________________________________________
consensus             CTTTACTTCCATCTGCCCTTCTCTGGTTTTACTCGGAGTTGGGGAAGCCATCGCTTCACG
 
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rJMSF051N24+          GTCATGCCCCAAGGTGCTTCTGTTGAATGGTACACACGACCGTGAAACCAGTGGCTTTAC
rJMSF041I21+          GTCATGCCCCAAGGTGCTTCTGTTGAATGGTACACACGACCGTGAAACCAGTGGCTTTAC
                      ____________________________________________________________
consensus             GTCATGCCCCAAGGTGCTTCTGTTGAATGGTACACACGACCGTGAAACCAGTGGCTTTAC
 
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rJMSF051N24+          TGCTTCCTGCTTTGTGACAGCCATCACCGATGCCCTAAACCGAACTTACGAGGATCGTTG
rJMSF041I21+          TGCTTCCTGCTTTGTGACAGCCATCACCGATGCCCTAAACCGAACTTACGAGGATCGTTG
                      ____________________________________________________________
consensus             TGCTTCCTGCTTTGTGACAGCCATCACCGATGCCCTAAACCGAACTTACGAGGATCGTTG
 
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rJMSF051N24+          CAATTGCCTTAAAAATCCCCCAAATAGATATATCAATACGCTTCTGGTGCCAAAAGACGG
rJMSF041I21+          CAATTGCCTTAAAAATCCCCCAAATAGATATATCAATACGCTTCTGGTGCCAAAAGACGG
                      ____________________________________________________________
consensus             CAATTGCCTTAAAAATCCCCCAAATAGATATATCAATACGCTTCTGGTGCCAAAAGACGG
 
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rJMSF051N24+          CCAAGTTCCGATGGATGTTGATCGCCTCACTTCCCAAGGGATTCGTAATGTGGTGACTGT
rJMSF041I21+          CCAAGTTCCGATGGATGTTGATCGCCTCACTTCCCAAGGGATTCGTAATGTGGTGACTGT
                      ____________________________________________________________
consensus             CCAAGTTCCGATGGATGTTGATCGCCTCACTTCCCAAGGGATTCGTAATGTGGTGACTGT
 
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rJMSF051N24+          AGATTCAGTCCATGACCCGAAAGTCGGTGCAATTTTCGACCCAAAATCATTAATCCAAGC
rJMSF041I21+          AGATTCAGTCCATGACCCGAAAGTCGGTGCAATTTTCGACCCAAAATCATTAATCCAAGC
                      ____________________________________________________________
consensus             AGATTCAGTCCATGACCCGAAAGTCGGTGCAATTTTCGACCCAAAATCATTAATCCAAGC
 
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rJMSF051N24+          ACTTGCAGGTTTGATCATACAAACATGAGAAAAACCGCAACCTTTTATATTATGAGATTG
rJMSF041I21+          ACTTGCAGGTTTGATCATACAAACATGAGAAAAACCGCAACCTTTTATATTATGAGATTG
                      ____________________________________________________________
consensus             ACTTGCAGGTTTGATCATACAAACATGAGAAAAACCGCAACCTTTTATATTATGAGATTG
 
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rJMSF051N24+          AAGAGCCAGCAGAGGAAGTATATTTGGCTATGAAGTTAGTAATGCTTTGACTGCCTTCTC
rJMSF041I21+          AAGAGCCAGCAGAGGAAGTATATTTGGCTATGAAGTTAGTAATGCTTTGACTGCCTTCTC
                      ____________________________________________________________
consensus             AAGAGCCAGCAGAGGAAGTATATTTGGCTATGAAGTTAGTAATGCTTTGACTGCCTTCTC
 
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rJMSF051N24+          AGAATTTGACAGTGATCCTAGGAGGATACAAGGTTTTTCATTGATTCTAGTACAGCTATT
rJMSF041I21+          AGAATTTGACAGTGATCCTAGGAGGATACAAGGTTTTTCATTGATTCTAGTACAGCTATT
                      ____________________________________________________________
consensus             AGAATTTGACAGTGATCCTAGGAGGATACAAGGTTTTTCATTGATTCTAGTACAGCTATT
 
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rJMSF051N24+          GGACATATAGGGAAGTTATAGAAGAAGCCTTTGTTGGATCCACAGTTGATATGTGATCAG
rJMSF041I21+          GGACATATAGGGAAGTTATAGAAGAAGCCTTTGTTGGATCCACAGTTGATATGTGATCAG
                      ____________________________________________________________
consensus             GGACATATAGGGAAGTTATAGAAGAAGCCTTTGTTGGATCCACAGTTGATATGTGATCAG
 
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rJMSF051N24+          AATTAATGTACCAGTGTAGTTCATTCACTTCAAATTACAAATG                 
rJMSF041I21+          AATTAATGTA-CAGTGTAGTTCATTCACTTCAAATTACAAATGCTCTTTCACATCACAAA
                      ____________________________________________________________
consensus             AATTAATGTACCAGTGTAGTTCATTCACTTCAAATTACAAATGCTCTTTCACATCACAAA