clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF038D13 | Sequence | 584 | 007202 (8) | ref|XP_011076854.1| | 191 | PREDICTED: uncharacterized protein LOC105161005 [Sesamum indicum] | 712 | 007202 (8) | ref|XP_006365679.1| | 259 | PREDICTED: uncharacterized protein LOC102579622 [Solanum tuberosum] |
JMSF037H20 | Sequence | 704 | 007202 (8) | ref|XP_006365679.1| | 285 | PREDICTED: uncharacterized protein LOC102579622 [Solanum tuberosum] | 661 | 007202 (8) | ref|XP_006365679.1| | 278 | PREDICTED: uncharacterized protein LOC102579622 [Solanum tuberosum] |
JMSF040C01 | Sequence | 660 | 007202 (8) | ref|XP_006365679.1| | 284 | PREDICTED: uncharacterized protein LOC102579622 [Solanum tuberosum] | 714 | 007202 (8) | ref|XP_006365679.1| | 284 | PREDICTED: uncharacterized protein LOC102579622 [Solanum tuberosum] |
JMSF041F12 | Sequence | 774 | 007202 (8) | ref|XP_006365679.1| | 284 | PREDICTED: uncharacterized protein LOC102579622 [Solanum tuberosum] | 745 | 007202 (8) | ref|XP_006365679.1| | 270 | PREDICTED: uncharacterized protein LOC102579622 [Solanum tuberosum] |
This contig is upended
. : . : . : . : . : . :
JMFF038D13- GGACAAAACCCCACAAGGTTCACAAATCAAAACCCCCCAGGCCACCTTCTCTTTCTCC
____________________________________________________________
consensus GGACAAAACCCCACAAGGTTCACAAATCAAAACCCCCCAGGCCACCTTCTCTTTCTCC
. : . : . : . : . : . :
JMFF038D13- TTTCCTCAAAAAAGTTTTCATCTTTTTACCCTTTTTCTGTCAAGAAGTGATAGATGGGTG
____________________________________________________________
consensus TTTCCTCAAAAAAGTTTTCATCTTTTTACCCTTTTTCTGTCAAGAAGTGATAGATGGGTG
. : . : . : . : . : . :
JMFF038D13- TTAATGTACAGGGTCTGTTTGTGATTTTGTGTTTTGGGTTTGTCTTTGCTCAAGATTCTC
JMSF040C01- ACCAGCAAGCTCAATAACACC
rJMSF040C01+ ACCAGCAAGCTCAATAACACC
____________________________________________________________
consensus TTAATGTACAGGGTCTGTTTGTGATTTTGTGTTTTGGGTACCAGCAAGCTCAATAACACC
. : . : . : . : . : . :
JMFF038D13- CT-TCTTCTTCTTCTTCAGAGTCCATAAAGGATCAGCTGAGAGAAGGGTACTACAAGGAA
JMSF040C01- ATGGACAAAACCCCACAAGAGTCCATAAAGGATCAGCTGAGAGAAGGGTACTACAAGGAA
JMSF037H20- AGAGTCCATAAAGGATCAGCTGAGAGAAGGGTACTACAAGGAA
rJMSF040C01+ ATGGACAAAACCCCACAAGAGTCCATAAAGGATCAGCTGAGAGAAGGGTACTACAAGGAA
rJMSF037H20+ CTGAGAGAAGGGTACTACAAGGAA
JMSF041F12- AGAGTCCATAAAGGATCAGCTGAGAGAAGGGTACTACAAGGAA
____________________________________________________________
consensus ATGGACAAAACCCCACAAGAGTCCATAAAGGATCAGCTGAGAGAAGGGTACTACAAGGAA
. : . : . : . : . : . :
JMFF038D13- AGCCGCGAGTACAATACTTCAGACCCAGGGCGTGCTTCTGACAATATACTCCCTCGCATT
JMSF040C01- AGCCGCGAGTACAATACTTCAGACCCAGGGCGTGCTTCTGACAATATACTCCCTCGCATT
JMSF037H20- AGCCGCGAGTACAATACTTCAGACCCAGGGCGTGCTTCTGACAATATACTCCCTCGCATT
rJMSF040C01+ AGCCGCGAGTACAATACTTCAGACCCAGGGCGTGCTTCTGACAATATACTCCCTCGCATT
rJMSF037H20+ AGCCGCGAGTACAATACTTCAGACCCAGGGCGTGCTTCTGACAATATACTCCCTCGCATT
JMSF041F12- AGCCGCGAGTACAATACTTCAGACCCAGGGCGTGCTTCTGACAATATACTCCCTCGCATT
rJMSF041F12+ GCTTCTGACAATATACTCCCTCGCATT
____________________________________________________________
consensus AGCCGCGAGTACAATACTTCAGACCCAGGGCGTGCTTCTGACAATATACTCCCTCGCATT
. : . : . : . : . : . :
JMFF038D13- TTCAATCTCTATGCATCACGTGCCACGCCTCAAGATTTTGAAATTTATGCTCCTGATGCA
JMSF040C01- TTCAATCTCTATGCATCACGTGCCACGCCTCAAGATTTTGAAATTTATGCTCCTGATGCA
JMSF037H20- TTCAATCTCTATGCATCACGTGCCACGCCTCAAGATTTTGAAATTTATGCTCCTGATGCA
rJMSF040C01+ TTCAATCTCTATGCATCACGTGCCACGCCTCAAGATTTTGAAATTTATGCTCCTGATGCA
rJMSF037H20+ TTCAATCTCTATGCATCACGTGCCACGCCTCAAGATTTTGAAATTTATGCTCCTGATGCA
JMSF041F12- TTCAATCTCTATGCATCACGTGCCACGCCTCAAGATTTTGAAATTTATGCTCCTGATGCA
rJMFF038D13+ TCTATGCATCACGTGCCACGCCTCAAGATTTTGAAATTTATGCTCCTGATGCA
rJMSF041F12+ TTCCATCTCTATGCATCACGTGCCACGCCTCAAGATTTTGAAATTTATGCTCCTGATGCA
____________________________________________________________
consensus TTCAATCTCTATGCATCACGTGCCACGCCTCAAGATTTTGAAATTTATGCTCCTGATGCA
. : . : . : . : . : . :
JMFF038D13- ACCTTTGAAGATCCTCTTATGTGTGCACAGGGGGTAAGCCAAATCAAATCCGCATTCTAT
JMSF040C01- ACCTTTGAAGATCCTCTTATGTGTGCACAGGGGGTAAGCCAAATCAAATCCGCATTCTAT
JMSF037H20- ACCTTTGAAGATCCTCTTATGTGTGCACAGGGGGTAAGCCAAATCAAATCCGCATTCTAT
rJMSF040C01+ ACCTTTGAAGATCCTCTTATGTGTGCACAGGGGGTAAGCCAAATCAAATCCGCATTCTAT
rJMSF037H20+ ACCTTTGAAGATCCTCTTATGTGTGCACAGGGGGTAAGCCAAATCAAATCCGCATTCTAT
JMSF041F12- ACCTTTGAAGATCCTCTTATGTGTGCACAGGGGGTAAGCCAAATCAAATCCGCATTCTAT
rJMFF038D13+ ACCTTTGAAGATCCTCTTATGTGTGCACAGGGGGTAAGCCAAATCAAATCCGCATTCTAT
rJMSF041F12+ ACCTTTGAAGATCCTCTTATGTGTGCACAGGGGGTAAGCCAAATCAAATCCGCATTCTAT
____________________________________________________________
consensus ACCTTTGAAGATCCTCTTATGTGTGCACAGGGGGTAAGCCAAATCAAATCCGCATTCTAT
. : . : . : . : . : . :
JMFF038D13- TCACTTGGCAAGATTTTCAGTGAATCGAGAATTGTAGAATACAGCTTGACAGAGAATGAG
JMSF040C01- TCACTTGGCAAGATTTTCAGTGAATCGAGAATTGTAGAATACAGCTTGACAGAGAATGAG
JMSF037H20- TCACTTGGCAAGATTTTCAGTGAATCGAGAATTGTAGAATACAGCTTGACAGAGAATGAG
rJMSF040C01+ TCACTTGGCAAGATTTTCAGTGAATCGAGAATTGTAGAATACAGCTTGACAGAGAATGAG
rJMSF037H20+ TCACTTGGCAAGATTTTCAGTGAATCGAGAATTGTAGAATACAGCTTGACAGAGAATGAG
JMSF041F12- TCACTTGGCAAGATTTTCAGTGAATCGAGAATTGTAGAATACAGCTTGACAGAGAATGAG
rJMFF038D13+ TCACTTGGCAAGATTTTCAGTGAATCGAGAATTGTAGAATACAGCTTGACAGAGAATGAG
rJMSF041F12+ TCACTTGGCAAGATTTTCAGTGAATCGAGAATTGTAGAATACAGCTTGACAGAGAATGAG
____________________________________________________________
consensus TCACTTGGCAAGATTTTCAGTGAATCGAGAATTGTAGAATACAGCTTGACAGAGAATGAG
. : . : . : . : . : . :
JMFF038D13- ATATCTCCCGGAAAGAAAGAGATACTAATTGATAACAAGCAATACTACAAGTTCATGGGT
JMSF040C01- ATATCTCCCGGAAAGAAAGAGATACTAATTGATAACAAGCAATACTACAAGTTCATGGGT
JMSF037H20- ATATCTCCCGGAAAGAAAGAGATACTAATTGATAACAAGCAATACTACAAGTTCATGGGT
rJMSF040C01+ ATATCTCCCGGAAAGAAAGAGATACTAATTGATAACAAGCAATACTACAAGTTCATGGGT
rJMSF037H20+ ATATCTCCCGGAAAGAAAGAGATACTAATTGATAACAAGCAATACTACAAGTTCATGGGT
JMSF041F12- ATATCTCCCGGAAAGAAAGAGATACTAATTGATAACAAGCAATACTACAAGTTCATGGGT
rJMFF038D13+ ATATCTCCCGGAAAGAAAGAGATACTAATTGATAACAAGCAATACTACAAGTTCATGGGT
rJMSF041F12+ ATATCTCCCGGAAAGAAAGAGATACTAATTGATAACAAGCAATACTACAAGTTCATGGGT
____________________________________________________________
consensus ATATCTCCCGGAAAGAAAGAGATACTAATTGATAACAAGCAATACTACAAGTTCATGGGT
. : . : . : . : . : . :
JMFF038D13- AGAGACATCCATATGGTATCGCTCATCAAGTTGTACACTGATGGAGG
JMSF040C01- AGAGACATCCATATGGTATCGCTCATCAAGTTGTACACTGATGGAGGAAAGGTTGTTCGC
JMSF037H20- AGAGACATCCATATGGTATCGCTCATCAAGTTGTACACTGATGGAGGAAAGGTTGTTCGC
rJMSF040C01+ AGAGACATCCATATGGTATCGCTCATCAAGTTGTACACTGATGGAGGAAAGGTTGTTCGC
rJMSF037H20+ AGAGACATCCATATGGTATCGCTCATCAAGTTGTACACTGATGGAGGAAAGGTTGTTCGC
JMSF041F12- AGAGACATCCATATGGTATCGCTCATCAAGTTGTACACTGATGGAGGAAAGGTTGTTCGC
rJMFF038D13+ AGAGACATCCATATGGTATCGCTCATCAAGTTGTACACTGATGGAGGAAAGGTTGTTCGC
rJMSF041F12+ AGAGACATCCATATGGTATCGCTCATCAAGTTGTACACTGATGGAGGAAAGGTTGTTCGC
____________________________________________________________
consensus AGAGACATCCATATGGTATCGCTCATCAAGTTGTACACTGATGGAGGAAAGGTTGTTCGC
. : . : . : . : . : . :
JMSF040C01- CATGAAGATTGTTGGGATAAGAAACCACTCCGGAACCAGAACACGGTGACGCTACCCCTT
JMSF037H20- CATGAAGATTGTTGGGATAAGAAACCACTCCGGAACCAGAACACGGTGACGCTACCCCTT
rJMSF040C01+ CATGAAGATTGTTGGGATAAGAAACCACTCCGGAACCAGAACACGGTGACGCTACCCCTT
rJMSF037H20+ CATGAAGATTGTTGGGATAAGAAACCACTCCGGAACCAGAACACGGTGACGCTACCCCTT
JMSF041F12- CATGAAGATTGTTGGGATAAGAAACCACTCCGGAACCAGAACACGGTGACGCTACCCCTT
rJMFF038D13+ CATGAAGATTGTTGGGATAAGAAACCACTCCGGAACCAGAACACGGTGACGCTACCCCTT
rJMSF041F12+ CATGAAGATTGTTGGGATAAGAAACCACTCCGGAACCAGAACACGGTGACGCTACCCCTT
____________________________________________________________
consensus CATGAAGATTGTTGGGATAAGAAACCACTCCGGAACCAGAACACGGTGACGCTACCCCTT
. : . : . : . : . : . :
JMSF040C01- GTTGGGAGGATGTTCGAGCTCTCTCGAAGAGCCTCGATGCTGGCAACTCATGCAGTGATG
JMSF037H20- GTTGGGAGGATGTTCGAGCTCTCTCGAAGAGCCTCGATGCTGGCAACTCATGCAGTGATG
rJMSF040C01+ GTTGGGAGGATGTTCGAGCTCTCTCGAAGAGCCTCGATGCTGGCAACTCATGCAGTGATG
rJMSF037H20+ GTTGGGAGGATGTTCGAGCTCTCTCGAAGAGCCTCGATGCTGGCAACTCATGCAGTGATG
JMSF041F12- GTTGGGAGGATGTTCGAGCTCTCTCGAAGAGCCTCGATGCTGGCAACTCATGCAGTGATG
rJMFF038D13+ GTTGGGAGGATGTTCGAGCTCTCTCGAAGAGCCTCGATGCTGGCAACTCATGCAGTGATG
rJMSF041F12+ GTTGGGAGGATGTTCGAGCTCTCTCGAAGAGCCTCGATGCTGGCAACTCATGCAGTGATG
____________________________________________________________
consensus GTTGGGAGGATGTTCGAGCTCTCTCGAAGAGCCTCGATGCTGGCAACTCATGCAGTGATG
. : . : . : . : . : . :
JMSF040C01- GGGTTTGGAAGGGATCCACCAAATCCAGTCATGTAAACCATTCCCTTTGGAAGTGAAAAT
JMSF037H20- GGGTTTGGAAGGGATCCACCAAATCCAGTCATGTAA
rJMSF040C01+ GGGTTTGGAAGGGATCCACCAAATCCAGTCATGTAAACCATTCCCTTTGGAAGTGAAAAT
rJMSF037H20+ GGGTTTGGAAGGGATCCACCAAATCCAGTCATGTAAACCATTCCCTTTGGAAGTGAAAAT
JMSF041F12- GGGTTTGGAAGGGATCCACCAAATCCAGTCATGTAAACCATTCCCTTTGGAAGTGAAAAT
rJMFF038D13+ GGGTTTGGAAGGGATCCACCAAATCCAGTCATGTAAACCATTCCCTTTGGAAGTGAAAAT
rJMSF041F12+ GGGTTTGGAAGGGATCCACCAAATCCAGTCATGTAAACCATTCCCTTTGGAAGTGAAAAT
____________________________________________________________
consensus GGGTTTGGAAGGGATCCACCAAATCCAGTCATGTAAACCATTCCCTTTGGAAGTGAAAAT
. : . : . : . : . : . :
JMSF040C01- TACTCAGTTTGCATACTTAATTTCATAGAAATGTATAA
rJMSF040C01+ TACTCAGTTTGCATACTTAATTTCATAGAAATGTATAATGTTGGGATGTTGTTTACATTG
rJMSF037H20+ TACTCAGTTTGCATACTTAATTTCATAGAAATGTATAATGTTGGGATGTTGTTTACATTG
JMSF041F12- TACTCAGTTTGCATACTTAATTTCATAGAAATGTATAATGTTGGGATGTTGTTTACATTG
rJMFF038D13+ TACTCAGTTTGCATACTTAATTTCATAGAAATGTATAATGTTGGGATGTTGTTTACATTG
rJMSF041F12+ TACTCAGTTTGCATACTTAATTTCATAGAAATGTATAATGTTGGGATGTTGTTTACATTG
____________________________________________________________
consensus TACTCAGTTTGCATACTTAATTTCATAGAAATGTATAATGTTGGGATGTTGTTTACATTG
. : . : . : . : . : . :
rJMSF040C01+ TATACCATGCAAAAGAAATGGTGGTGGTGCAG
rJMSF037H20+ TATA-CATGCAAAAGAAATGGTGGTGGTGCAGTTACTT
JMSF041F12- TATA-CATGCAAAAGAAATGGTGGTGGTGCAGTTACTTTGGACTTTGGAGTATATATATC
rJMFF038D13+ TATA-CATGCAAAAGAAATGGTGGTGGTGCAGTTACTTTGGACTTTGGAGTATATATATC
rJMSF041F12+ TATA-CATGCAAAAGAAATGGTGGTGGTGCAGTTACTTTGGACTTTGGAGTATATATATC
____________________________________________________________
consensus TATA-CATGCAAAAGAAATGGTGGTGGTGCAGTTACTTTGGACTTTGGAGTATATATATC
. : . : . : . : . : . :
JMSF041F12- TATGTAAACCAAATATGTTGAAT
rJMFF038D13+ TATGTAAACCAAATATGTTGAATTGGGCTGATGGAGTTTGTTGTGGGTGAAAAGGGGTCC
rJMSF041F12+ TATGTAAACCAAATATGTTGAATTGGGCTGATGGAG-TTGTTGTGGGTGAAAAGGGGTCC
____________________________________________________________
consensus TATGTAAACCAAATATGTTGAATTGGGCTGATGGAGTTTGTTGTGGGTGAAAAGGGGTCC
. : . : . : . : . : . :
rJMFF038D13+ TAGAATAATCCTACAAAAAGTTATGCTTCTATTGTTTTATACATTTAGGTTATGAAGAAC
rJMSF041F12+ TAGAATAATCCTACAAAAAGTTATGCTTCTATTGTTTTATACATTTAGGTTATGAAGAAC
____________________________________________________________
consensus TAGAATAATCCTACAAAAAGTTATGCTTCTATTGTTTTATACATTTAGGTTATGAAGAAC