Contig 007202:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF038D13Sequence584007202 (8)ref|XP_011076854.1|191PREDICTED: uncharacterized protein LOC105161005 [Sesamum indicum]712007202 (8)ref|XP_006365679.1|259PREDICTED: uncharacterized protein LOC102579622 [Solanum tuberosum]
JMSF037H20Sequence704007202 (8)ref|XP_006365679.1|285PREDICTED: uncharacterized protein LOC102579622 [Solanum tuberosum]661007202 (8)ref|XP_006365679.1|278PREDICTED: uncharacterized protein LOC102579622 [Solanum tuberosum]
JMSF040C01Sequence660007202 (8)ref|XP_006365679.1|284PREDICTED: uncharacterized protein LOC102579622 [Solanum tuberosum]714007202 (8)ref|XP_006365679.1|284PREDICTED: uncharacterized protein LOC102579622 [Solanum tuberosum]
JMSF041F12Sequence774007202 (8)ref|XP_006365679.1|284PREDICTED: uncharacterized protein LOC102579622 [Solanum tuberosum]745007202 (8)ref|XP_006365679.1|270PREDICTED: uncharacterized protein LOC102579622 [Solanum tuberosum]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF038D13- GGACAAAACCCCACAAGGTTCACAAATCAAAACCCCCCAGGCCACCTTCTCTTTCTCC
                      ____________________________________________________________
consensus GGACAAAACCCCACAAGGTTCACAAATCAAAACCCCCCAGGCCACCTTCTCTTTCTCC
 
. : . : . : . : . : . :
JMFF038D13- TTTCCTCAAAAAAGTTTTCATCTTTTTACCCTTTTTCTGTCAAGAAGTGATAGATGGGTG
                      ____________________________________________________________
consensus TTTCCTCAAAAAAGTTTTCATCTTTTTACCCTTTTTCTGTCAAGAAGTGATAGATGGGTG
 
. : . : . : . : . : . :
JMFF038D13- TTAATGTACAGGGTCTGTTTGTGATTTTGTGTTTTGGGTTTGTCTTTGCTCAAGATTCTC
JMSF040C01- ACCAGCAAGCTCAATAACACC
rJMSF040C01+ ACCAGCAAGCTCAATAACACC
                      ____________________________________________________________
consensus TTAATGTACAGGGTCTGTTTGTGATTTTGTGTTTTGGGTACCAGCAAGCTCAATAACACC
 
. : . : . : . : . : . :
JMFF038D13- CT-TCTTCTTCTTCTTCAGAGTCCATAAAGGATCAGCTGAGAGAAGGGTACTACAAGGAA
JMSF040C01- ATGGACAAAACCCCACAAGAGTCCATAAAGGATCAGCTGAGAGAAGGGTACTACAAGGAA
JMSF037H20- AGAGTCCATAAAGGATCAGCTGAGAGAAGGGTACTACAAGGAA
rJMSF040C01+ ATGGACAAAACCCCACAAGAGTCCATAAAGGATCAGCTGAGAGAAGGGTACTACAAGGAA
rJMSF037H20+ CTGAGAGAAGGGTACTACAAGGAA
JMSF041F12- AGAGTCCATAAAGGATCAGCTGAGAGAAGGGTACTACAAGGAA
                      ____________________________________________________________
consensus ATGGACAAAACCCCACAAGAGTCCATAAAGGATCAGCTGAGAGAAGGGTACTACAAGGAA
 
. : . : . : . : . : . :
JMFF038D13- AGCCGCGAGTACAATACTTCAGACCCAGGGCGTGCTTCTGACAATATACTCCCTCGCATT
JMSF040C01- AGCCGCGAGTACAATACTTCAGACCCAGGGCGTGCTTCTGACAATATACTCCCTCGCATT
JMSF037H20- AGCCGCGAGTACAATACTTCAGACCCAGGGCGTGCTTCTGACAATATACTCCCTCGCATT
rJMSF040C01+ AGCCGCGAGTACAATACTTCAGACCCAGGGCGTGCTTCTGACAATATACTCCCTCGCATT
rJMSF037H20+ AGCCGCGAGTACAATACTTCAGACCCAGGGCGTGCTTCTGACAATATACTCCCTCGCATT
JMSF041F12- AGCCGCGAGTACAATACTTCAGACCCAGGGCGTGCTTCTGACAATATACTCCCTCGCATT
rJMSF041F12+ GCTTCTGACAATATACTCCCTCGCATT
                      ____________________________________________________________
consensus AGCCGCGAGTACAATACTTCAGACCCAGGGCGTGCTTCTGACAATATACTCCCTCGCATT
 
. : . : . : . : . : . :
JMFF038D13- TTCAATCTCTATGCATCACGTGCCACGCCTCAAGATTTTGAAATTTATGCTCCTGATGCA
JMSF040C01- TTCAATCTCTATGCATCACGTGCCACGCCTCAAGATTTTGAAATTTATGCTCCTGATGCA
JMSF037H20- TTCAATCTCTATGCATCACGTGCCACGCCTCAAGATTTTGAAATTTATGCTCCTGATGCA
rJMSF040C01+ TTCAATCTCTATGCATCACGTGCCACGCCTCAAGATTTTGAAATTTATGCTCCTGATGCA
rJMSF037H20+ TTCAATCTCTATGCATCACGTGCCACGCCTCAAGATTTTGAAATTTATGCTCCTGATGCA
JMSF041F12- TTCAATCTCTATGCATCACGTGCCACGCCTCAAGATTTTGAAATTTATGCTCCTGATGCA
rJMFF038D13+ TCTATGCATCACGTGCCACGCCTCAAGATTTTGAAATTTATGCTCCTGATGCA
rJMSF041F12+ TTCCATCTCTATGCATCACGTGCCACGCCTCAAGATTTTGAAATTTATGCTCCTGATGCA
                      ____________________________________________________________
consensus TTCAATCTCTATGCATCACGTGCCACGCCTCAAGATTTTGAAATTTATGCTCCTGATGCA
 
. : . : . : . : . : . :
JMFF038D13- ACCTTTGAAGATCCTCTTATGTGTGCACAGGGGGTAAGCCAAATCAAATCCGCATTCTAT
JMSF040C01- ACCTTTGAAGATCCTCTTATGTGTGCACAGGGGGTAAGCCAAATCAAATCCGCATTCTAT
JMSF037H20- ACCTTTGAAGATCCTCTTATGTGTGCACAGGGGGTAAGCCAAATCAAATCCGCATTCTAT
rJMSF040C01+ ACCTTTGAAGATCCTCTTATGTGTGCACAGGGGGTAAGCCAAATCAAATCCGCATTCTAT
rJMSF037H20+ ACCTTTGAAGATCCTCTTATGTGTGCACAGGGGGTAAGCCAAATCAAATCCGCATTCTAT
JMSF041F12- ACCTTTGAAGATCCTCTTATGTGTGCACAGGGGGTAAGCCAAATCAAATCCGCATTCTAT
rJMFF038D13+ ACCTTTGAAGATCCTCTTATGTGTGCACAGGGGGTAAGCCAAATCAAATCCGCATTCTAT
rJMSF041F12+ ACCTTTGAAGATCCTCTTATGTGTGCACAGGGGGTAAGCCAAATCAAATCCGCATTCTAT
                      ____________________________________________________________
consensus ACCTTTGAAGATCCTCTTATGTGTGCACAGGGGGTAAGCCAAATCAAATCCGCATTCTAT
 
. : . : . : . : . : . :
JMFF038D13- TCACTTGGCAAGATTTTCAGTGAATCGAGAATTGTAGAATACAGCTTGACAGAGAATGAG
JMSF040C01- TCACTTGGCAAGATTTTCAGTGAATCGAGAATTGTAGAATACAGCTTGACAGAGAATGAG
JMSF037H20- TCACTTGGCAAGATTTTCAGTGAATCGAGAATTGTAGAATACAGCTTGACAGAGAATGAG
rJMSF040C01+ TCACTTGGCAAGATTTTCAGTGAATCGAGAATTGTAGAATACAGCTTGACAGAGAATGAG
rJMSF037H20+ TCACTTGGCAAGATTTTCAGTGAATCGAGAATTGTAGAATACAGCTTGACAGAGAATGAG
JMSF041F12- TCACTTGGCAAGATTTTCAGTGAATCGAGAATTGTAGAATACAGCTTGACAGAGAATGAG
rJMFF038D13+ TCACTTGGCAAGATTTTCAGTGAATCGAGAATTGTAGAATACAGCTTGACAGAGAATGAG
rJMSF041F12+ TCACTTGGCAAGATTTTCAGTGAATCGAGAATTGTAGAATACAGCTTGACAGAGAATGAG
                      ____________________________________________________________
consensus TCACTTGGCAAGATTTTCAGTGAATCGAGAATTGTAGAATACAGCTTGACAGAGAATGAG
 
. : . : . : . : . : . :
JMFF038D13- ATATCTCCCGGAAAGAAAGAGATACTAATTGATAACAAGCAATACTACAAGTTCATGGGT
JMSF040C01- ATATCTCCCGGAAAGAAAGAGATACTAATTGATAACAAGCAATACTACAAGTTCATGGGT
JMSF037H20- ATATCTCCCGGAAAGAAAGAGATACTAATTGATAACAAGCAATACTACAAGTTCATGGGT
rJMSF040C01+ ATATCTCCCGGAAAGAAAGAGATACTAATTGATAACAAGCAATACTACAAGTTCATGGGT
rJMSF037H20+ ATATCTCCCGGAAAGAAAGAGATACTAATTGATAACAAGCAATACTACAAGTTCATGGGT
JMSF041F12- ATATCTCCCGGAAAGAAAGAGATACTAATTGATAACAAGCAATACTACAAGTTCATGGGT
rJMFF038D13+ ATATCTCCCGGAAAGAAAGAGATACTAATTGATAACAAGCAATACTACAAGTTCATGGGT
rJMSF041F12+ ATATCTCCCGGAAAGAAAGAGATACTAATTGATAACAAGCAATACTACAAGTTCATGGGT
                      ____________________________________________________________
consensus ATATCTCCCGGAAAGAAAGAGATACTAATTGATAACAAGCAATACTACAAGTTCATGGGT
 
. : . : . : . : . : . :
JMFF038D13- AGAGACATCCATATGGTATCGCTCATCAAGTTGTACACTGATGGAGG
JMSF040C01- AGAGACATCCATATGGTATCGCTCATCAAGTTGTACACTGATGGAGGAAAGGTTGTTCGC
JMSF037H20- AGAGACATCCATATGGTATCGCTCATCAAGTTGTACACTGATGGAGGAAAGGTTGTTCGC
rJMSF040C01+ AGAGACATCCATATGGTATCGCTCATCAAGTTGTACACTGATGGAGGAAAGGTTGTTCGC
rJMSF037H20+ AGAGACATCCATATGGTATCGCTCATCAAGTTGTACACTGATGGAGGAAAGGTTGTTCGC
JMSF041F12- AGAGACATCCATATGGTATCGCTCATCAAGTTGTACACTGATGGAGGAAAGGTTGTTCGC
rJMFF038D13+ AGAGACATCCATATGGTATCGCTCATCAAGTTGTACACTGATGGAGGAAAGGTTGTTCGC
rJMSF041F12+ AGAGACATCCATATGGTATCGCTCATCAAGTTGTACACTGATGGAGGAAAGGTTGTTCGC
                      ____________________________________________________________
consensus AGAGACATCCATATGGTATCGCTCATCAAGTTGTACACTGATGGAGGAAAGGTTGTTCGC
 
. : . : . : . : . : . :
JMSF040C01- CATGAAGATTGTTGGGATAAGAAACCACTCCGGAACCAGAACACGGTGACGCTACCCCTT
JMSF037H20- CATGAAGATTGTTGGGATAAGAAACCACTCCGGAACCAGAACACGGTGACGCTACCCCTT
rJMSF040C01+ CATGAAGATTGTTGGGATAAGAAACCACTCCGGAACCAGAACACGGTGACGCTACCCCTT
rJMSF037H20+ CATGAAGATTGTTGGGATAAGAAACCACTCCGGAACCAGAACACGGTGACGCTACCCCTT
JMSF041F12- CATGAAGATTGTTGGGATAAGAAACCACTCCGGAACCAGAACACGGTGACGCTACCCCTT
rJMFF038D13+ CATGAAGATTGTTGGGATAAGAAACCACTCCGGAACCAGAACACGGTGACGCTACCCCTT
rJMSF041F12+ CATGAAGATTGTTGGGATAAGAAACCACTCCGGAACCAGAACACGGTGACGCTACCCCTT
                      ____________________________________________________________
consensus CATGAAGATTGTTGGGATAAGAAACCACTCCGGAACCAGAACACGGTGACGCTACCCCTT
 
. : . : . : . : . : . :
JMSF040C01- GTTGGGAGGATGTTCGAGCTCTCTCGAAGAGCCTCGATGCTGGCAACTCATGCAGTGATG
JMSF037H20- GTTGGGAGGATGTTCGAGCTCTCTCGAAGAGCCTCGATGCTGGCAACTCATGCAGTGATG
rJMSF040C01+ GTTGGGAGGATGTTCGAGCTCTCTCGAAGAGCCTCGATGCTGGCAACTCATGCAGTGATG
rJMSF037H20+ GTTGGGAGGATGTTCGAGCTCTCTCGAAGAGCCTCGATGCTGGCAACTCATGCAGTGATG
JMSF041F12- GTTGGGAGGATGTTCGAGCTCTCTCGAAGAGCCTCGATGCTGGCAACTCATGCAGTGATG
rJMFF038D13+ GTTGGGAGGATGTTCGAGCTCTCTCGAAGAGCCTCGATGCTGGCAACTCATGCAGTGATG
rJMSF041F12+ GTTGGGAGGATGTTCGAGCTCTCTCGAAGAGCCTCGATGCTGGCAACTCATGCAGTGATG
                      ____________________________________________________________
consensus GTTGGGAGGATGTTCGAGCTCTCTCGAAGAGCCTCGATGCTGGCAACTCATGCAGTGATG
 
. : . : . : . : . : . :
JMSF040C01- GGGTTTGGAAGGGATCCACCAAATCCAGTCATGTAAACCATTCCCTTTGGAAGTGAAAAT
JMSF037H20- GGGTTTGGAAGGGATCCACCAAATCCAGTCATGTAA
rJMSF040C01+ GGGTTTGGAAGGGATCCACCAAATCCAGTCATGTAAACCATTCCCTTTGGAAGTGAAAAT
rJMSF037H20+ GGGTTTGGAAGGGATCCACCAAATCCAGTCATGTAAACCATTCCCTTTGGAAGTGAAAAT
JMSF041F12- GGGTTTGGAAGGGATCCACCAAATCCAGTCATGTAAACCATTCCCTTTGGAAGTGAAAAT
rJMFF038D13+ GGGTTTGGAAGGGATCCACCAAATCCAGTCATGTAAACCATTCCCTTTGGAAGTGAAAAT
rJMSF041F12+ GGGTTTGGAAGGGATCCACCAAATCCAGTCATGTAAACCATTCCCTTTGGAAGTGAAAAT
                      ____________________________________________________________
consensus GGGTTTGGAAGGGATCCACCAAATCCAGTCATGTAAACCATTCCCTTTGGAAGTGAAAAT
 
. : . : . : . : . : . :
JMSF040C01- TACTCAGTTTGCATACTTAATTTCATAGAAATGTATAA
rJMSF040C01+ TACTCAGTTTGCATACTTAATTTCATAGAAATGTATAATGTTGGGATGTTGTTTACATTG
rJMSF037H20+ TACTCAGTTTGCATACTTAATTTCATAGAAATGTATAATGTTGGGATGTTGTTTACATTG
JMSF041F12- TACTCAGTTTGCATACTTAATTTCATAGAAATGTATAATGTTGGGATGTTGTTTACATTG
rJMFF038D13+ TACTCAGTTTGCATACTTAATTTCATAGAAATGTATAATGTTGGGATGTTGTTTACATTG
rJMSF041F12+ TACTCAGTTTGCATACTTAATTTCATAGAAATGTATAATGTTGGGATGTTGTTTACATTG
                      ____________________________________________________________
consensus TACTCAGTTTGCATACTTAATTTCATAGAAATGTATAATGTTGGGATGTTGTTTACATTG
 
. : . : . : . : . : . :
rJMSF040C01+ TATACCATGCAAAAGAAATGGTGGTGGTGCAG
rJMSF037H20+ TATA-CATGCAAAAGAAATGGTGGTGGTGCAGTTACTT
JMSF041F12- TATA-CATGCAAAAGAAATGGTGGTGGTGCAGTTACTTTGGACTTTGGAGTATATATATC
rJMFF038D13+ TATA-CATGCAAAAGAAATGGTGGTGGTGCAGTTACTTTGGACTTTGGAGTATATATATC
rJMSF041F12+ TATA-CATGCAAAAGAAATGGTGGTGGTGCAGTTACTTTGGACTTTGGAGTATATATATC
                      ____________________________________________________________
consensus TATA-CATGCAAAAGAAATGGTGGTGGTGCAGTTACTTTGGACTTTGGAGTATATATATC
 
. : . : . : . : . : . :
JMSF041F12- TATGTAAACCAAATATGTTGAAT
rJMFF038D13+ TATGTAAACCAAATATGTTGAATTGGGCTGATGGAGTTTGTTGTGGGTGAAAAGGGGTCC
rJMSF041F12+ TATGTAAACCAAATATGTTGAATTGGGCTGATGGAG-TTGTTGTGGGTGAAAAGGGGTCC
                      ____________________________________________________________
consensus TATGTAAACCAAATATGTTGAATTGGGCTGATGGAGTTTGTTGTGGGTGAAAAGGGGTCC
 
. : . : . : . : . : . :
rJMFF038D13+ TAGAATAATCCTACAAAAAGTTATGCTTCTATTGTTTTATACATTTAGGTTATGAAGAAC
rJMSF041F12+ TAGAATAATCCTACAAAAAGTTATGCTTCTATTGTTTTATACATTTAGGTTATGAAGAAC
                      ____________________________________________________________
consensus TAGAATAATCCTACAAAAAGTTATGCTTCTATTGTTTTATACATTTAGGTTATGAAGAAC