| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF014L11 | Sequence | 547 | 000095 (9) | ref|XP_009613972.1| | 1e-90 | PREDICTED: mannosylglycoprotein endo-beta-mannosidase-like [Nicotiana tomentosi | 742 | 007178 (5) | ref|XP_009767426.1| | 5e-68 | PREDICTED: mannosylglycoprotein endo-beta-mannosidase isoform X2 [Nicotiana syl |
| JMFF018J17 | Sequence | 569 | 000095 (9) | ref|XP_009613972.1| | 1e-95 | PREDICTED: mannosylglycoprotein endo-beta-mannosidase-like [Nicotiana tomentosi | 672 | 007178 (5) | ref|XP_009767426.1| | 6e-56 | PREDICTED: mannosylglycoprotein endo-beta-mannosidase isoform X2 [Nicotiana syl |
| JMSF030L08 | Sequence | 641 | 000095 (9) | ref|XP_009613972.1| | 2e-116 | PREDICTED: mannosylglycoprotein endo-beta-mannosidase-like [Nicotiana tomentosi | 697 | 007178 (5) | ref|XP_009767426.1| | 2e-63 | PREDICTED: mannosylglycoprotein endo-beta-mannosidase isoform X2 [Nicotiana syl |
| JMSF035K05 | Sequence | 709 | 007178 (5) | ref|XP_009767426.1| | 2e-52 | PREDICTED: mannosylglycoprotein endo-beta-mannosidase isoform X2 [Nicotiana syl | |||||
| JMSF036I24 | Sequence | 672 | 000095 (9) | ref|XP_009613972.1| | 1e-127 | PREDICTED: mannosylglycoprotein endo-beta-mannosidase-like [Nicotiana tomentosi | 712 | 007178 (5) | ref|XP_009767426.1| | 2e-53 | PREDICTED: mannosylglycoprotein endo-beta-mannosidase isoform X2 [Nicotiana syl |
This contig is upended
. : . : . : . : . : . :
rJMFF014L11+ GGTGATTATAA
____________________________________________________________
consensus GGTGATTATAA
. : . : . : . : . : . :
rJMSF030L08+ TTACAGGGCGAAGAAAATACCAATCAAAATAACTTCTCTGACTTTCAT
rJMFF018J17+ AT
rJMFF014L11+ GCTTTTGGAACNTTACAGGGCGAAGAAAATACCAATCAAAATAACTTCTCTGACTTTCAT
____________________________________________________________
consensus GCTTTTGGAACNTTACAGGGCGAAGAAAATACCAATCAAAATAACTTCTCTGACTTTCAT
. : . : . : . : . : . :
rJMSF030L08+ TAACGGGTCTAGGTATGAAATGCGGTTGCACGTTCAGAACACATCGAAGAAGCCGGATTC
rJMFF018J17+ TAACGGGTCTAGGTATGAAATGCGGTTGCACGTTCAGAACACATCGAAGAAGCCGGATTC
rJMFF014L11+ TAACGGGTCTAGGTATGAAATGCGGTTGCACGTTCAGAACACATCGAAGAAGCCGGATTC
rJMSF035K05+ CTAGGTATGNAATGCGGTTGCACGTTCAGAACACATCGANGAAGCCGGATTC
rJMSF036I24+ CTAGGTATGAAATGCGGNTGCACGTTCAGAACACATCGAAGAAGCCGGATTC
____________________________________________________________
consensus TAACGGGTCTAGGTATGAAATGCGGTTGCACGTTCAGAACACATCGAAGAAGCCGGATTC
. : . : . : . : . : . :
rJMSF030L08+ CAGAACTACACTCCATGAAAACAATTTCGTTACAATAAATGGCGGCTGTGATTCAGAACC
rJMFF018J17+ CAGAACTACACTCCATGAAAACAATTTCGTTACAATAAATGGCGGCTGTGATTCAGAACC
rJMFF014L11+ CAGAACTACACTCCATGAAAACAATTTCGTTACAATAAATGGCGGCTGTGATTCAGAACC
rJMSF035K05+ CAGAACTACACTCCATGAAAACAATTTCGTTACAATAAATGGCGGCTGTGATTCAGAACC
rJMSF036I24+ CAGAACTACACTCCATGAAAACAATTTCGTTACAATAAATGGCGGCTGTGATTCAGAACC
____________________________________________________________
consensus CAGAACTACACTCCATGAAAACAATTTCGTTACAATAAATGGCGGCTGTGATTCAGAACC
. : . : . : . : . : . :
rJMSF030L08+ AGCTGATTATCTCACCGGGGGGAGAAATGAAATCAGTTCATTTAAGAAGCTGTGGAGGAG
rJMFF018J17+ AGCTGATTATCTCACCGGGGGGAGAAATGAAATCAGTTCATTTAAGAAGCTGTGGAGGAG
rJMFF014L11+ AGCTGATTATCTCACCGGGGGGAGAAATGAAATCAGTTCATTTAAGAAGCTGTGGAGGAG
rJMSF035K05+ AGCTGATTATCTCACCGGGGGGAGAAATGAAATCAGTTCATTTAAGAAGCTGTGGAGGAG
rJMSF036I24+ AGCTGATTATCTCACCGGGGGGAGAAATGAAATCAGTTCATTTAAGAAGCTGTGGAGGAG
____________________________________________________________
consensus AGCTGATTATCTCACCGGGGGGAGAAATGAAATCAGTTCATTTAAGAAGCTGTGGAGGAG
. : . : . : . : . : . :
rJMSF030L08+ CATTATCGGAGACCACAGCAATGTGAAGGTTTCTGAAATTAACGGAACTGAAGCAGGGGT
rJMFF018J17+ CATTATCGGAGACCACAGCAATGTGAAGGTTTCTGAAATTAACGGAACTGAAGCAGGGGT
rJMFF014L11+ CATTATCGGAGACCACAGCAATGTGAAGGTTTCTGAAATTAACGGAACTGAAGCAGGGGT
rJMSF035K05+ CATTATCGGAGACCACAGCAATGTGAAGGTTTCTGAAATTAACGGAACTGAAGCAGGGGT
rJMSF036I24+ CATTATCGGAGACCACAGCAATGTGAAGGTTTCTGAAATTAACGGAACTGAAGCAGGGGT
____________________________________________________________
consensus CATTATCGGAGACCACAGCAATGTGAAGGTTTCTGAAATTAACGGAACTGAAGCAGGGGT
. : . : . : . : . : . :
rJMSF030L08+ TGCTTTCTTCCTTTATTTCTCGGTTAATGCTGCAAAGAAGAGCGTCAAGGAAGAGGAGGA
rJMFF018J17+ TGCTTTCTTCCTTTATTTCTCGGTTAATGCTGCAAAGAAGAGCGTCAAGGAAGAGGAGGA
rJMFF014L11+ TGCTTTCTTCCTTTATTTCTCGGTTAATGCTGCAAAGAAGAGCGTCAAGGAAGAGGAGGA
rJMSF035K05+ TGCTTTCTTCCTTTATTTCTCGGTTAATGCTGCAAAGAAGAGCGTCAAGGAAGAGGAGGA
rJMSF036I24+ TGCTTTCTTCCTTTATTTCTCGGTTAATGCTGCAAAGAAGAGCGTCAAGGAAGAGGAGGA
____________________________________________________________
consensus TGCTTTCTTCCTTTATTTCTCGGTTAATGCTGCAAAGAAGAGCGTCAAGGAAGAGGAGGA
. : . : . : . : . : . :
rJMSF030L08+ CACACGCATTCTTCCTGTTCATTACTCGGATAACTATTTCTCACTAGTACCGGGCGAATC
rJMFF018J17+ CACACGCATTCTTCCTGTTCATTACTCGGATAACTATTTCTCACTAGTACCGGGCGAATC
rJMFF014L11+ CACACGCATTCTTCCTGTTCATTACTCGGATAACTATTTCTCACTAGTACCGGGCGAATC
rJMSF035K05+ CACACGCATTCTTCCTGTTCATTACTCGGATAACTATTTCTCACTAGTACCGGGCGAATC
rJMSF036I24+ CACACGCATTCTTCCTGTTCATTACTCGGATAACTATTTCTCACTAGTACCGGGCGAATC
____________________________________________________________
consensus CACACGCATTCTTCCTGTTCATTACTCGGATAACTATTTCTCACTAGTACCGGGCGAATC
. : . : . : . : . : . :
rJMSF030L08+ AATGAAGATAACGCTCTCGTTTGAAGTACCTCCAGGCGTAACCCCACGAGTCACGCTCCA
rJMFF018J17+ AATGAAGATAACGCTCTCGTTTGAAGTACCTCCAGGCGTAACCCCACGAGTCACGCTCCA
rJMFF014L11+ AATGAAGATAACGCTCTCGTTTGAAGTACCTCCAGGCGTAACCCCACGAGTCACGCTCCA
rJMSF035K05+ AATGAAGATAACGCTCTCGTTTGAAGTACCTCCAGGCGTAACCCCACGAGTCACGCTCCA
rJMSF036I24+ AATGAAGATAACGCTCTCGTTTGAAGTACCTCCAGGCGTAACCCCACGAGTCACGCTCCA
____________________________________________________________
consensus AATGAAGATAACGCTCTCGTTTGAAGTACCTCCAGGCGTAACCCCACGAGTCACGCTCCA
. : . : . : . : . : . :
rJMSF030L08+ TGGCTGGAACAACCAGGCCTTGCAGATAGTTCATTGAATCCAAAATCACACCCTATCCAC
rJMFF018J17+ TGGCTGGAACAACCAGGCCTTGCAGATAGTTCATTGAATCCAAAATCACACCCTATCCAC
rJMFF014L11+ TGGCTGGAACAACCAGGCCTTGCAGATAGTTCATTGAATCCAAAATCACACCCTATCCAC
rJMSF035K05+ TGGCTGGAACAACCAGGCCTTGCAGATAGTTCATTGAATCCAAAATCACACCCTATCCAC
rJMSF036I24+ TGGCTGGAACAACCAGGCCTTGCAGATAGTTCATTGAATCCAAAATCACACCCTATCCAC
____________________________________________________________
consensus TGGCTGGAACAACCAGGCCTTGCAGATAGTTCATTGAATCCAAAATCACACCCTATCCAC
. : . : . : . : . : . :
rJMSF030L08+ TGCCCAGGTAAATAAAGTTTACTTGTTATATTCAGAAATAAGAATGCATGTTAAGGCCAC
rJMFF018J17+ TGCCCAGGTAAATAAAGTTTACTTGTTATATTCAGAAATAAGAATGCATGTTAAGGCCAC
rJMFF014L11+ TGCCCAGGTAAATAAAGTTTACTTGTTATATTCAGAAATAAGAATGCATGTTAAGGCCAC
rJMSF035K05+ TGCCCAGGTAAATAAAGTTTACTTGTTATATTCAGAAATAAGAATGCATGTTAAGGCCAC
rJMSF036I24+ TGCCCAGGTAAATAAAGTTTACTTGTTATATTCAGAAATAAGAATGCATGTTAAGGCCAC
____________________________________________________________
consensus TGCCCAGGTAAATAAAGTTTACTTGTTATATTCAGAAATAAGAATGCATGTTAAGGCCAC
. : . : . : . : . : . :
rJMSF030L08+ ATATGTATGTATACTATATGTCTAACTAGGATCTAGTCATAAGTCTTATGTCGTTTGATT
rJMFF018J17+ ATATGTATGTATACTATATGTCTAACTAGGATCTAGTCATAAGTCTTATGTCGTTTGATT
rJMFF014L11+ ATATGTATGTATACTATATGTCTAACTAGGATCTAGTCATAAGTCTTATGTCGTTTGATT
rJMSF035K05+ ATATGTATGTATACTATATGTCTAACTAGGATCTAGTCATAAGTCTTATGTCGTTTGATT
rJMSF036I24+ ATATGTATGTATACTATATGTCTAACTAGGATCTAGTCATAAGTCTTATGTCGTTTGATT
____________________________________________________________
consensus ATATGTATGTATACTATATGTCTAACTAGGATCTAGTCATAAGTCTTATGTCGTTTGATT
. : . : . : . : . : . :
rJMSF030L08+ GATCGAACTAAGCCCGAATCACCCCAAATACTATTGTGATTATGTTGTA
rJMFF018J17+ GATCGAACTAAGCCCGAATCACCCCAAATACTATTGTGATTATGTTGTATGTTAGATTGT
rJMFF014L11+ GATCGAACTAAGCCCGAATCACCCCAAATACTATTGTGATTATGTTGTATGTTAGATTGT
rJMSF035K05+ GATCGAACTAAGCCCGAATCACCCCAAATACTATTGTGATTATGTTGTATGTTAGATTGT
rJMSF036I24+ GATCGAACTAAGCCCGAATCACCCCAAATACTATTGTGATTATGTTGTATGTTAGATTGT
____________________________________________________________
consensus GATCGAACTAAGCCCGAATCACCCCAAATACTATTGTGATTATGTTGTATGTTAGATTGT
. : . : . : . : . : . :
rJMFF018J17+ TAGTAAAACT
rJMFF014L11+ TAGTAAAACT
rJMSF035K05+ TAGTAAAACTTGATGATATTGATGTCAAAGTTTAGATGAGTATGTGTAGTGTTGTTT
rJMSF036I24+ TAGTAAAACTTGATGATATTGATGTCAAAGTTTAGATGAGTATGTGTAGTGTTGTTTGGA
____________________________________________________________
consensus TAGTAAAACTTGATGATATTGATGTCAAAGTTTAGATGAGTATGTGTAGTGTTGTTTGGA