Contig 007167:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF033M18Sequence673007167 (5)ref|XP_006348725.1|212PREDICTED: uncharacterized protein LOC102579102 [Solanum tuberosum]732007167 (5)ref|XP_009619019.1|372PREDICTED: uncharacterized protein LOC104111113 [Nicotiana tomentosiformis]
JMSF046A13Sequence484007167 (5)ref|XP_006348725.1|96.7PREDICTED: uncharacterized protein LOC102579102 [Solanum tuberosum]658007167 (5)ref|XP_009619019.1|310PREDICTED: uncharacterized protein LOC104111113 [Nicotiana tomentosiformis]
JMSF051O20Sequence717007167 (5)gb|EYU28820.1|1e-115hypothetical protein MIMGU_mgv1a008353mg [Erythranthe guttata]718009378 (19)emb|CDP07234.1|3e-84unnamed protein product [Coffea canephora]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF046A13- G
                      ____________________________________________________________
consensus G
 
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JMSF046A13- GGACCGTTCACGGCGGCGGACGCCATACCCGGACTATGAAAATCCGACGAGAACACTCAC
                      ____________________________________________________________
consensus GGACCGTTCACGGCGGCGGACGCCATACCCGGACTATGAAAATCCGACGAGAACACTCAC
 
. : . : . : . : . : . :
JMSF046A13- CGTAGCGCCACAGAATCAATAAACAGACTGCAAAACCCCAGTTCATGGGAAGGTGGAGAG
JMSF033M18- GCCACAGAATCAATAAACAGACTGCAAAACCCCAGTTCATGGGAAGGTGGAGAG
                      ____________________________________________________________
consensus CGTAGCGCCACAGAATCAATAAACAGACTGCAAAACCCCAGTTCATGGGAAGGTGGAGAG
 
. : . : . : . : . : . :
JMSF046A13- CTGCTGCTCTCACTCTCTCACGCATAGCCACCAAGCCCAAACCAACCGATCCCAACTCCC
JMSF033M18- CTGCTGCTCTCACTCTCTCACGCATAGCCACCAAGCCCAAACCAACCGATCCCAACTCCC
                      ____________________________________________________________
consensus CTGCTGCTCTCACTCTCTCACGCATAGCCACCAAGCCCAAACCAACCGATCCCAACTCCC
 
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JMSF046A13- CCGCGAACCCGCCTCGCAGGTTCGCAGATTTTGCATCCTCAGCTTCAGCGCCCATATTTC
JMSF033M18- CCGCGAACCCGCCTCGCAGGTTCGCAGATTTTGCATCCTCAGCTTCAGCGCCCATATTTC
                      ____________________________________________________________
consensus CCGCGAACCCGCCTCGCAGGTTCGCAGATTTTGCATCCTCAGCTTCAGCGCCCATATTTC
 
. : . : . : . : . : . :
JMSF046A13- GATTGCTGAATTTGAAGTCGTTTTCCGCCGCCCCGTGGCCGTCTCCTCTCTACATCGATG
JMSF033M18- GATTGCTGAATTTGAAGTCGTTTTCCGCCGCCCCGTGGCCGTCTCCTCTCTACATCGATG
JMSF051O20+ CATCGATG
                      ____________________________________________________________
consensus GATTGCTGAATTTGAAGTCGTTTTCCGCCGCCCCGTGGCCGTCTCCTCTCTACATCGATG
 
. : . : . : . : . : . :
JMSF046A13- AATTCGACTGCAATCCTGTTGATTTTGCTCAGAGCCCGAAGCGCAAACCGGTCGTGGAAT
JMSF033M18- AATTCGACTGCAATCCTGTTGATTTTGCTCAGAGCCCGAAGCGCAAACCGGTCGTGGAAT
JMSF051O20+ AATTCGACTGCAATCCTGTTGA-TTTGCTCAGAGCCCGAAGCGCAAACCGGTCGTGGAAT
                      ____________________________________________________________
consensus AATTCGACTGCAATCCTGTTGATTTTGCTCAGAGCCCGAAGCGCAAACCGGTCGTGGAAT
 
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JMSF046A13- CTGGAAAAATTCCAATCAAAGCTTATTTTCTTTCCACCAGTATTGATTTGAAGAGCTTGC
JMSF033M18- CTGGAAAAATTCCAATCAAAGCTTATTTTCTTTCCACCAGTATTGATTTGAAGAGCTTGC
JMSF051O20+ CTGGAAAAATTCCAATCAAAGCTTATTTTCTTTCCACCAGTATTGATTTGAAGAGCTTGC
                      ____________________________________________________________
consensus CTGGAAAAATTCCAATCAAAGCTTATTTTCTTTCCACCAGTATTGATTTGAAGAGCTTGC
 
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JMSF046A13- AAGCAGAGCATTTCAGAAATGTCATTCCTCCAGCCTCTCGTTCATCAAACTATACAGTAC
JMSF033M18- AAGCAGAGCATTTCAGAAATGTCATTCCTCCAGCCTCTCGTTCATCAAACTATACAGTAC
JMSF051O20+ AAGCAGAGCATTTCAGAAATGTCATTCCTCCAGCCTCTCGTTCATCAAACTATACAGTAC
                      ____________________________________________________________
consensus AAGCAGAGCATTTCAGAAATGTCATTCCTCCAGCCTCTCGTTCATCAAACTATACAGTAC
 
. : . : . : . : . : . :
JMSF046A13- TCA
JMSF033M18- TCAGATTTCGGAACTTTCCATTATCCACTGCCATTGGAATTGGAGAAAATGCAGACTGCT
JMSF051O20+ TCAGATTTCGGAACTTTCCATTATCCACTGCCATTGGAATTGGAGAAAATGCAGACTGCT
                      ____________________________________________________________
consensus TCAGATTTCGGAACTTTCCATTATCCACTGCCATTGGAATTGGAGAAAATGCAGACTGCT
 
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JMSF033M18- TCCACCACATGGTTGTCTTCCAGTATGGTTCAGCTGTCCTGTTCAATGTCGATGATGATG
JMSF051O20+ TCCACCACATGGTTGTCTTCCAGTATGGTTCAGCTGTCCTGTTCAATGTCGATGATGATG
                      ____________________________________________________________
consensus TCCACCACATGGTTGTCTTCCAGTATGGTTCAGCTGTCCTGTTCAATGTCGATGATGATG
 
. : . : . : . : . : . :
JMSF033M18- AAGCCGAATGCTACCTTCAAACAGTGAGAAGATATGCGACTGGATTGCTTCGGGAGATGA
JMSF051O20+ AAGCCGAATGCTACCTTCAAACAGTGAGAAGATATGCGACTGGATTGCTTCGGGAGATGA
rJMSF046A13+ GGAGATGA
rJMSF033M18+ AGCCGAATGCTACCTTCAANCAGTGAGAAGATATGCGACTGGATTGCTTCGGGAGATGA
                      ____________________________________________________________
consensus AAGCCGAATGCTACCTTCAAACAGTGAGAAGATATGCGACTGGATTGCTTCGGGAGATGA
 
. : . : . : . : . : . :
JMSF033M18- AAAAAGATGATTATGCAGTAAAAGAGAAGCCATCATTGATTGAGGATATGGA-GGGACGC
JMSF051O20+ AAAAAGATGATTATGCAGTAAAAGAGAAGCCATCATTGATTGAGGATATGGA-GGGACGC
rJMSF046A13+ AAAAAGATGATTATGCAGTAAANGAGAAGCCATCATTGATTGAGGATATGGAGGGGACGC
rJMSF033M18+ AAAAAGATGATTATGCAGTAAAAGAGAAGCCATCATTGATTGAGGATATGGA-GGGACGC
                      ____________________________________________________________
consensus AAAAAGATGATTATGCAGTAAAAGAGAAGCCATCATTGATTGAGGATATGGA-GGGACGC
 
. : . : . : . : . : . :
JMSF033M18- CCGGACTACATTGTTCTGA
JMSF051O20+ CCGGACTACATTGTTCTGAAAAATCTGGACACAGATAGTATCCGTGTAATTAGCAGTGTG
rJMSF046A13+ CCGGACTACATTGTTCTGAAAAATCTGGACACAGATAGTATCCGTGTAATTAGCAGTGTG
rJMSF033M18+ CCGGACTACATTGTTCTGAAAAATCTGGACACAGATAGTATCCGTGTAATTAGCAGTGTG
                      ____________________________________________________________
consensus CCGGACTACATTGTTCTGAAAAATCTGGACACAGATAGTATCCGTGTAATTAGCAGTGTG
 
. : . : . : . : . : . :
JMSF051O20+ CTTGGGCAAAGTATTGCGCTTGATTACTTTGTCTCACAGATTGATGGAATGGTTGAAGAA
rJMSF046A13+ CTTGGGCAAAGTATTGCGCTTGATTACTTTGTCTCACAGATTGATGGAATGGTTGAAGAA
rJMSF033M18+ CTTGGGCAAAGTATTGCGCTTGATTACTTTGTCTCACAGATTGATGGAATGGTTGAAGAA
                      ____________________________________________________________
consensus CTTGGGCAAAGTATTGCGCTTGATTACTTTGTCTCACAGATTGATGGAATGGTTGAAGAA
 
. : . : . : . : . : . :
JMSF051O20+ TTTGCTAATATAAATCGTGAAATGGAGAGAACTGGAAATTTCACAATGGACCGGAAGAAG
rJMSF046A13+ TTTGCTAATATAAATCGTGAAATGGAGAGAACTGGAAATTTCACAATGGACCGGAAGAAG
rJMSF033M18+ TTTGCTAATATAAATCGTGAAATGGAGAGAACTGGAAATTTCACAATGGACCGGAAGAAG
                      ____________________________________________________________
consensus TTTGCTAATATAAATCGTGAAATGGAGAGAACTGGAAATTTCACAATGGACCGGAAGAAG
 
. : . : . : . : . : . :
JMSF051O20+ CTCTTTCAGCTCGTTGGCAAGGCTAATTCAAACCTAGCCGATGTAATTTTGAAAGTCGGC
rJMSF046A13+ CTCTTTCAGCTCGTTGGCAAGGCTAATTCAAACCTAGCCGATGTAATTTTGAAAGTCGGC
rJMSF033M18+ CTCTTTCAGCTCGTTGGCAAGGCTAATTCAAACCTAGCCGATGTAATTTTGAAAGTCGGC
                      ____________________________________________________________
consensus CTCTTTCAGCTCGTTGGCAAGGCTAATTCAAACCTAGCCGATGTAATTTTGAAAGTCGGC
 
. : . : . : . : . : . :
JMSF051O20+ CTTTTTGAGAGATCTGAAATTGCTTGGCGAGATGCAAAGTATGCCCAGATA
rJMSF046A13+ CTTTTTGAGAGATCTGAAATTGCTTGGCGAGATGCAAAGTATGCCCAGATACTCGAGTAC
rJMSF033M18+ CTTTTTGAGAGATCTGAAATTGCTTGGCGAGATGCAAAGTATGCCCAGATACTCGAGTAC
                      ____________________________________________________________
consensus CTTTTTGAGAGATCTGAAATTGCTTGGCGAGATGCAAAGTATGCCCAGATACTCGAGTAC
 
. : . : . : . : . : . :
rJMSF046A13+ CTGTCTGAGGAATATGAGGTGACACAACGCTTTGCCAACCTTAACTTCAAACTCAAATTT
rJMSF033M18+ CTGTCTGAGGAATATGAGGTGACACAACGCTTTGCCAACCTTAACTTCAAACTCAAATTT
                      ____________________________________________________________
consensus CTGTCTGAGGAATATGAGGTGACACAACGCTTTGCCAACCTTAACTTCAAACTCAAATTT
 
. : . : . : . : . : . :
rJMSF046A13+ GTTGAGCATAACATTCATTTTCTTCAGGAAGTTCTTCAAAACAGAAAGTCGGATCTACTA
rJMSF033M18+ GTTGAGCATAACATTCATTTTCTTCAGGAAGTTCTTCAAAACAGAAAGTCGGATCTACTA
                      ____________________________________________________________
consensus GTTGAGCATAACATTCATTTTCTTCAGGAAGTTCTTCAAAACAGAAAGTCGGATCTACTA
 
. : . : . : . : . : . :
rJMSF046A13+ GAGTGGGTCATCATAGTTTTACTGGCCATAGACAACATTGTTTCTGTATATGAGATTCTT
rJMSF033M18+ GAGTGGGTCATCATAGTTTTACTGGCCATAGACAACATTGTTTCTGTATATGAGATTCTT
                      ____________________________________________________________
consensus GAGTGGGTCATCATAGTTTTACTGGCCATAGACAACATTGTTTCTGTATATGAGATTCTT
 
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rJMSF046A13+ CGCGAGTCGACTGCTGTTCCTATGTGAACATCATATATATGCACTAATCATATTCTTTTT
rJMSF033M18+ CGCGAGTCGACTGCTGTTCCTATGTGAACATCATATATATGCACTAATCATATTCTTTTT
                      ____________________________________________________________
consensus CGCGAGTCGACTGCTGTTCCTATGTGAACATCATATATATGCACTAATCATATTCTTTTT
 
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rJMSF046A13+ AGCCTATAACATTGATACAGAACACCCTCAAAGAAAGGGGATGTATTTTT
rJMSF033M18+ AGCCTATAACATTGATACAGAACACCCTCAAAGAAAGGGGATGTATTTTTTGTTTCATCT
                      ____________________________________________________________
consensus AGCCTATAACATTGATACAGAACACCCTCAAAGAAAGGGGATGTATTTTTTGTTTCATCT