Contig 007162:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF039I08+                                                         AAGGAAAGAATCA
                      ____________________________________________________________
consensus                                                            AAGGAAAGAATCA
 
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rJMSF039I08+          CTATTCCTGTCCATTATATCTTTAGCAAAGGGGATAGAAGCTGAATTAGAGCCTGAACCT
                      ____________________________________________________________
consensus             CTATTCCTGTCCATTATATCTTTAGCAAAGGGGATAGAAGCTGAATTAGAGCCTGAACCT
 
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rJMSF039I08+          CGGCTAGTTACCCCCACTCAGATGATCAATCGAGCAAAGAATATGCTAATGCTCGTATAT
                      ____________________________________________________________
consensus             CGGCTAGTTACCCCCACTCAGATGATCAATCGAGCAAAGAATATGCTAATGCTCGTATAT
 
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rJMSF039I08+          GTGGAGCTGAGAAATGGAGAAAAGCAATGGCAAAATTTTTGAGGCAGCCACACTTTATTG
                      ____________________________________________________________
consensus             GTGGAGCTGAGAAATGGAGAAAAGCAATGGCAAAATTTTTGAGGCAGCCACACTTTATTG
 
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rJMSF039I08+          TGTGGGACAATGGTGACCTAGTGACGCATGAGGTTATGGGTGGTTTGAAGAATGTGTATG
rJMSF032J05+             GGGACAATGGTGACCTAGTGACGCATGAGGTTATGGGTGGTTTGAAGAATGTGTATG
                      ____________________________________________________________
consensus             TGTGGGACAATGGTGACCTAGTGACGCATGAGGTTATGGGTGGTTTGAAGAATGTGTATG
 
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rJMSF039I08+          CCATTGGAGCTGGTATGGTAGCAGCTCTCACGAATGAGAGTGCCACAAGCAAGTCAGTAT
rJMSF032J05+          CCATTGGAGCTGGTATGGTAGCAGCTCTCACGAATGAGAGTGCCACAAGCAAGTCAGTAT
                      ____________________________________________________________
consensus             CCATTGGAGCTGGTATGGTAGCAGCTCTCACGAATGAGAGTGCCACAAGCAAGTCAGTAT
 
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rJMSF039I08+          ACTTCGCACATTGTACATCTGAGATGATATTTATTACTCATCTTTTGACGGAAGAACCGG
rJMSF032J05+          ACTTCGCACATTGTACATCTGAGATGATATTTATTACTCATCTTTTGACGGAAGAACCGG
                      ____________________________________________________________
consensus             ACTTCGCACATTGTACATCTGAGATGATATTTATTACTCATCTTTTGACGGAAGAACCGG
 
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rJMSF039I08+          AGAAACTTGCGGGTCCTCTCTTGGCTGACACATATGTGACCCTTCTGAAAGGTCGTAATG
rJMSF032J05+          AGAAACTTGCGGGTCCTCTCTTGGCTGACACATATGTGACCCTTCTGAAAGGTCGTAATG
                      ____________________________________________________________
consensus             AGAAACTTGCGGGTCCTCTCTTGGCTGACACATATGTGACCCTTCTGAAAGGTCGTAATG
 
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rJMSF039I08+          CATGGTATGGCCAAAAGTTGGCTAAAGGAGAATTAAGTCTCGAAATGGGCGATAGCATCA
rJMSF032J05+          CATGGTATGGCCAAAAGTTGGCTAAAGGAGAATTAAGTCTCGAAATGGGCGATAGCATCA
                      ____________________________________________________________
consensus             CATGGTATGGCCAAAAGTTGGCTAAAGGAGAATTAAGTCTCGAAATGGGCGATAGCATCA
 
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rJMSF039I08+          AGGGGAAAGGGATGATACAGGGAGTTTCGGCAGTGAAAGCCTTCTACGAGTTGCTCAGTC
rJMSF032J05+          AGGGGAAAGGGATGATACAGGGAGTTTCGGC-GTGAAAGCCTTCTACGAGTTGCTCAGTC
                      ____________________________________________________________
consensus             AGGGGAAAGGGATGATACAGGGAGTTTCGGCAGTGAAAGCCTTCTACGAGTTGCTCAGTC
 
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rJMSF039I08+          AATCAAGTTTAAACATTTATGATTCGGGTGAAAACAAGAACGTTGTAGCAGTCGAACTTT
rJMSF032J05+          AATCAAGTTTAAACATTTATGATTCGGGTGAAAACAAGAACGTTGTAGCAGTCGAACTTT
                      ____________________________________________________________
consensus             AATCAAGTTTAAACATTTATGATTCGGGTGAAAACAAGAACGTTGTAGCAGTCGAACTTT
 
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rJMSF039I08+          GCCCCATCTTAAAGACGTTATATAAAATTCTAATAGTGAGAGAGGCATCAACCGAGGCTA
rJMSF032J05+          GCCCCATCTTAAAGACGTTATATAAAATTCTAATAGTGAGAGAGGCATCAACCGAGGCTA
                      ____________________________________________________________
consensus             GCCCCATCTTAAAGACGTTATATAAAATTCTAATAGTGAGAGAGGCATCAACCGAGGCTA
 
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rJMSF039I08+          TTCTTCAGGCGCTGAGAGACGAAACTATGAACGACCCCCGGGATCGGATTGAGATTGCAC
rJMSF032J05+          TTCTTCAGGCGCTGAGAGACGAAACTATGAACGACCCCCGGGATCGGATTGAGATTGCAC
                      ____________________________________________________________
consensus             TTCTTCAGGCGCTGAGAGACGAAACTATGAACGACCCCCGGGATCGGATTGAGATTGCAC
 
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rJMSF039I08+          AAAGCCATGCCTTCTACAGACCTGCATTACTTGGGAAGTAGTGTAGTGTTGTTAAATTTG
rJMSF032J05+          AAAGCCATGCCTTCTACAGACCTGCATTACTTGGGAAGTAGTGTAGTGTTGTTAAATTTG
                      ____________________________________________________________
consensus             AAAGCCATGCCTTCTACAGACCTGCATTACTTGGGAAGTAGTGTAGTGTTGTTAAATTTG
 
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rJMSF039I08+          CAGTTTGTTTTTACAGTCCTGAAAATAGTTGTGTATTCAGTAGGTTTTGTTTGAAGTTAT
rJMSF032J05+          CAGTTTGTTTTTACAGTCCTGAAAATAGTTGTGTATTCAGTAGATTTTGTTTGAAGTTAT
                      ____________________________________________________________
consensus             CAGTTTGTTTTTACAGTCCTGAAAATAGTTGTGTATTCAGTAGGTTTTGTTTGAAGTTAT
 
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rJMSF039I08+          GTAGACTAGTTTCAGGGTGATGGGAAGAGGTGAGTGTTTTGTTAGTTCCATTC       
rJMSF032J05+          GTAGACTAGTTTCAGGGTGATGGGAAGAGGTGAGTGTTTTGTTAGTTCCATTCCATGTTC
                      ____________________________________________________________
consensus             GTAGACTAGTTTCAGGGTGATGGGAAGAGGTGAGTGTTTTGTTAGTTCCATTCCATGTTC