Contig 007157:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF007J05Sequence322007157 (5)808007157 (5)ref|XP_002530954.1|9e-100Protein grpE, putative [Ricinus communis] gb|EEF31426.1| Protein grpE, putative
JMSF031G22Sequence536007157 (5)ref|XP_009592594.1|3e-05PREDICTED: grpE protein homolog, mitochondrial isoform X2 [Nicotiana tomentosif584007157 (5)gb|KDO46641.1|2e-67hypothetical protein CISIN_1g019043mg [Citrus sinensis]
JMSF033D06Sequence701011768 (4)ref|XP_009607690.1|1e-07PREDICTED: uncharacterized ATP-dependent helicase C23E6.02 isoform X2 [Nicotian272007157 (5)gb|KDO46641.1|1e-32hypothetical protein CISIN_1g019043mg [Citrus sinensis]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF031G22- GACCAATCCACCATACTCACCTGTCCA
                      ____________________________________________________________
consensus GACCAATCCACCATACTCACCTGTCCA
 
. : . : . : . : . : . :
JMSF007J05- GTCCATTTCAATCCTCTCTCTCTCTCTCTCCCTCTTCATCCCATGGCCTC
JMSF031G22- ACTGCTTTCCGTCCATTTCAATCCTCTCTCTCTCTCTCTCCCTCTTCATCCCATGGCCTC
                      ____________________________________________________________
consensus ACTGCTTTCCGTCCATTTCAATCCTCTCTCTCTCTCTCTCCCTCTTCATCCCATGGCCTC
 
. : . : . : . : . : . :
JMSF007J05- CACTGTCCTGAGGACGGCCTCCGCCTTGAGGGCGCCGCCGTCAGCTTCCCTCACCGCCAC
JMSF031G22- CACTGTCCTGAGGACGGCCTCCGCCTTGAGGGCGCCGCCGTCAGCTTCCCTCACCGCCAC
                      ____________________________________________________________
consensus CACTGTCCTGAGGACGGCCTCCGCCTTGAGGGCGCCGCCGTCAGCTTCCCTCACCGCCAC
 
. : . : . : . : . : . :
JMSF007J05- CGCTAACTCTTCCACCTCACGCCATAATTTCTCCTGCGTCGTTTCCTTTCCCAGACGGAG
JMSF031G22- CGCTAACTCTTCCACCTCACGCCATAATTTCTCCTGCGTCGTTTCCTTTCCCAGACGGAG
                      ____________________________________________________________
consensus CGCTAACTCTTCCACCTCACGCCATAATTTCTCCTGCGTCGTTTCCTTTCCCAGACGGAG
 
. : . : . : . : . : . :
JMSF007J05- ACGGGCTTCGTCACGCCTCCCTGCACGCTGTCGCGTCCACCACCACTCTTCTGGACCCGC
JMSF031G22- ACGGGCTTCGTCACGCCTCCCTGCACGCTGTCGCGTCCACCACCACTCTTCTGGACCCGC
                      ____________________________________________________________
consensus ACGGGCTTCGTCACGCCTCCCTGCACGCTGTCGCGTCCACCACCACTCTTCTGGACCCGC
 
. : . : . : . : . : . :
JMSF007J05- AATTCGACTGCCCGTGAGCCGCTCATCGGGGAAATTCTCGCTCTTTGCTTCTGATGGAGA
JMSF031G22- AATTCGACTGCCCGTGAGCCGCTCATCGGGGAAATTCTCGCTCTTTGCTTCTGATGGAGA
                      ____________________________________________________________
consensus AATTCGACTGCCCGTGAGCCGCTCATCGGGGAAATTCTCGCTCTTTGCTTCTGATGGAGA
 
. : . : . : . : . : . :
JMSF007J05- CGTTGCGGAGACTGCTCAGACTGAACCTCA
JMSF031G22- CGTTGCGGAGACTGCTCAGACTGAACCTCAGGAACAGGACCAAGTTCAAGACTCTGAGGT
                      ____________________________________________________________
consensus CGTTGCGGAGACTGCTCAGACTGAACCTCAGGAACAGGACCAAGTTCAAGACTCTGAGGT
 
. : . : . : . : . : . :
JMSF031G22- AGAGGACAATCAAGATGTTGCTCCGGGAAGTGATGATATTTCAAATGAGGCTGATACTAC
                      ____________________________________________________________
consensus AGAGGACAATCAAGATGTTGCTCCGGGAAGTGATGATATTTCAAATGAGGCTGATACTAC
 
. : . : . : . : . : . :
JMSF031G22- AACTTCAGAGGAAACTGCTTCAATTGTTATGATGGCTTTGAAGTCATATAGAGATGCGTT
rJMSF007J05+ TTGAAGTCATATAGAGATGCGTT
                      ____________________________________________________________
consensus AACTTCAGAGGAAACTGCTTCAATTGTTATGATGGCTTTGAAGTCATATAGAGATGCGTT
 
. : . : . : . : . : . :
JMSF031G22- GGATACTAATGACGAGTCTAAAATTGCAG
rJMSF007J05+ GGATACTAATGACGAGTCTAAAATTGCAGAATTAGAAGCTTTTCTCAAGTCTATAGAGGA
                      ____________________________________________________________
consensus GGATACTAATGACGAGTCTAAAATTGCAGAATTAGAAGCTTTTCTCAAGTCTATAGAGGA
 
. : . : . : . : . : . :
rJMSF007J05+ TGAGAAAGTCAATCTTGAGAGAAAACTGCTGTTATTAACCGAAGAGCTCTCAAATGAGAA
                      ____________________________________________________________
consensus TGAGAAAGTCAATCTTGAGAGAAAACTGCTGTTATTAACCGAAGAGCTCTCAAATGAGAA
 
. : . : . : . : . : . :
rJMSF007J05+ GGACCGAGTTCTTAGAATTAGTGCTGATTTTGACAATTTCCGGAAGAGAACTGAGAGGGA
                      ____________________________________________________________
consensus GGACCGAGTTCTTAGAATTAGTGCTGATTTTGACAATTTCCGGAAGAGAACTGAGAGGGA
 
. : . : . : . : . : . :
rJMSF007J05+ ACGACTTTCTTCGTTTACAAATGCGCAAGGGGAAGTTGTTGAGAAACTTTTACCGGTGTT
rJMSF031G22+ GGGGAAGTTGNTGAGAAACTTTTACCGGTGTT
                      ____________________________________________________________
consensus ACGACTTTCTTCGTTTACAAATGCGCAAGGGGAAGTTGTTGAGAAACTTTTACCGGTGTT
 
. : . : . : . : . : . :
rJMSF007J05+ GGATAACTTTGATAGAGCGAAAACCCAAATCAAGGTGGAAAGTGAGGGAGAGGAGAAAAT
rJMSF031G22+ GGATAACTTTGATAGAGCGAAAACCCAAATCAAGGTGGAAAGTGAGGGAGAGGAGAAAAT
                      ____________________________________________________________
consensus GGATAACTTTGATAGAGCGAAAACCCAAATCAAGGTGGAAAGTGAGGGAGAGGAGAAAAT
 
. : . : . : . : . : . :
rJMSF033D06+ GTTTGTGGAAATTCTAGGATCTCTTGGTGT
rJMSF007J05+ CAATAACAGCTACCAGAGCATCTCTAAACAGTTTGTGGAAATTCTAGGATCTCTTGGTGT
rJMSF031G22+ CAATAACAGCTACCAGAGCATCTCTAAACAGTTTGTGGAAATTCTAGGATCTCTTGGTGT
                      ____________________________________________________________
consensus CAATAACAGCTACCAGAGCATCTCTAAACAGTTTGTGGAAATTCTAGGATCTCTTGGTGT
 
. : . : . : . : . : . :
rJMSF033D06+ TACACCTGTGGAGACCGTTGGGAAGCCATTTGATCCATTGCTCCATGAAGCTATAATGCG
rJMSF007J05+ TACACCTGTGGAGACCGTTGGGAAGCCATTTGATCCATTGCTCCATGAAGCTATAATGCG
rJMSF031G22+ TACACCTGTGGAGACCGTTGGGAAGCCATTTGATCCATTGCTCCATGAAGCTATAATGCG
                      ____________________________________________________________
consensus TACACCTGTGGAGACCGTTGGGAAGCCATTTGATCCATTGCTCCATGAAGCTATAATGCG
 
. : . : . : . : . : . :
rJMSF033D06+ CGAAGATTCNGTGGAATTCGATGAAGGNGTCATTATACAAGAATTTCGCANGGGTTTCCA
rJMSF007J05+ TGAAGATTCAGTGGAATTCGATGAAGGCGTCATTATACAAGAATTTCGCAAGGGTTTCCA
rJMSF031G22+ TGAAGATTCAGTGGAATTCGATGAAGGCGTCATTATACAAGAATTTCGCAAGGGTTTCCA
                      ____________________________________________________________
consensus TGAAGATTCAGTGGAATTCGATGAAGGCGTCATTATACAAGAATTTCGCAAGGGTTTCCA
 
. : . : . : . : . : . :
rJMSF033D06+ ACTTGGAGAAAGANTCTTGCNCCCNTCAATGGCGANGGNNTGNGCTNNTCCTGGGCCNGC
rJMSF007J05+ ACTTGGAGAAAGACTCTTGCGCCCCTCAATGGTGAAGGTGTCTGCTGGTCCTGGGCCTGC
rJMSF031G22+ ACTTGGAGAAAGACTCTTGCGCCCCTCAATGGTGAAGGTGTCTGCTGGTCCTGGGCCTGC
                      ____________________________________________________________
consensus ACTTGGAGAAAGACTCTTGCGCCCCTCAATGGTGAAGGTGTCTGCTGGTCCTGGGCCTGC
 
. : . : . : . : . : . :
rJMSF033D06+ AAAGCCGGAGNCATCGNACCNTGCAGACGAACAAGGNGGTTTTNTTGAGACAGCTGAGG
rJMSF007J05+ AAAGCCGGAGACATCGGACCCTGCAGAAGAACAAGGGGGTTTTATTGAGACAGCTGAGGA
rJMSF031G22+ AAAGCCGGAGACATCGGACCCTGCAGAAGAACAAGGGGGTTTTATTGAGACAGCTGAGGA
                      ____________________________________________________________
consensus AAAGCCGGAGACATCGGACCCTGCAGAAGAACAAGGGGGTTTTATTGAGACAGCTGAGGA
 
. : . : . : . : . : . :
rJMSF007J05+ AGGTGGTAGTCAGCCAGAGGGTGCTAATGAGACTGGTTAGGAGAGTAACTCTATACAAGG
rJMSF031G22+ AGGTGGTAGTCAGCCAGAGGGTGCTAATGAGACTGGTTAGGAGAGTAACTCTATACAAGG
                      ____________________________________________________________
consensus AGGTGGTAGTCAGCCAGAGGGTGCTAATGAGACTGGTTAGGAGAGTAACTCTATACAAGG
 
. : . : . : . : . : . :
rJMSF007J05+ CCCACCTTTATGACCAAAACAAAATTCACTTTTTCTTAAAATTTTGTATGAGTAAACCAA
rJMSF031G22+ CCCACCTTTATGACCAAAACAAAATTCACTTTTTCTTAAAATTTTGTATGAGTAAACCAA
                      ____________________________________________________________
consensus CCCACCTTTATGACCAAAACAAAATTCACTTTTTCTTAAAATTTTGTATGAGTAAACCAA
 
. : . : . : . : . : . :
rJMSF007J05+ AATCCCTTGTAGCTATAAGTTGAGTTTTTGGTCTGTTTGAAGGGTTGATCTTT
rJMSF031G22+ AATCCCTTGTAGCTATAAGTTGAGTTTTTGGTCTGTTTGAAGGGTTGATCTTTGATGAGT
                      ____________________________________________________________
consensus AATCCCTTGTAGCTATAAGTTGAGTTTTTGGTCTGTTTGAAGGGTTGATCTTTGATGAGT