Contig 007134:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF027E05Sequence656007134 (3)dbj|BAF95169.1|4e-111putative protein kinase [Ipomoea nil]788007134 (3)dbj|BAF95169.1|2e-104putative protein kinase [Ipomoea nil]
JMSF041P09Sequence718012133 (2)dbj|BAF95169.1|5e-117putative protein kinase [Ipomoea nil]815007134 (3)dbj|BAF95169.1|1e-154putative protein kinase [Ipomoea nil]

Alignment

This contig is upended


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rJMSF041P09+                                  CCAACAAAGGCAAAGCATTAAACTNGGNAAGGAGGT
                      ____________________________________________________________
consensus                                     CCAACAAAGGCAAAGCATTAAACTNGGNAAGGAGGT
 
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JMSF027E05-                         GGGACTGCAGAAGGCCTAGTCTACCTCCACGAGAATTCGAGGAATC
rJMSF041P09+          TTGAAATAATTATAGGGACTGCAGAAGGCCTAGTCTACCTCCACGAGAATTCGAGGAATC
rJMSF027E05+                                                            TCGAGGAATC
                      ____________________________________________________________
consensus             TTGAAATAATTATAGGGACTGCAGAAGGCCTAGTCTACCTCCACGAGAATTCGAGGAATC
 
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JMSF027E05-           GAATTATCCACAGAGACATAAAAGCTAGCAACATCCTATTGGACTCGAGGCTTCGTGCAA
rJMSF041P09+          GAATTATCCACAGAGACATAAAAGCTAGCAACATCCTATTGGACTCGAGGCTTCGTGCTA
rJMSF027E05+          GAATTATCCACAGAGACATAAAAGCTAGCAACATCCTATTGGACTCGAGGCTTCGTGCAA
                      ____________________________________________________________
consensus             GAATTATCCACAGAGACATAAAAGCTAGCAACATCCTATTGGACTCGAGGCTTCGTGCAA
 
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JMSF027E05-           AAATTGCTGATTTTGGGTTGGCAAGATCCTTCCAAGAAGACAAAAGCCATATAAGCACTG
rJMSF041P09+          AAATTGCTGATTTTGGGTTGGCAAGATCCTTCCAAGAAGACAAAAGCCATATAAGCACTG
rJMSF027E05+          AAATTGCTGATTTTGGGTTGGCAAGATCCTTCCAAGAAGACAAAAGCCATATAAGCACTG
                      ____________________________________________________________
consensus             AAATTGCTGATTTTGGGTTGGCAAGATCCTTCCAAGAAGACAAAAGCCATATAAGCACTG
 
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JMSF027E05-           CAATTGCGGGAACTCTGGGATATATGGCCCCAGAGTACCTTGCCCACGGGCAGTTAAGCG
rJMSF041P09+          CAATTGCGGGAACTCTGGGATATATGGCCCCAGAGTACCTTGCCCACGGGCAGTTAAGCG
rJMSF027E05+          CAATTGCGGGAACTCTGGGATATATGGCCCCAGAGTACCTTGCCCACGGGCAGTTAAGCG
                      ____________________________________________________________
consensus             CAATTGCGGGAACTCTGGGATATATGGCCCCAGAGTACCTTGCCCACGGGCAGTTAAGCG
 
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JMSF027E05-           AAAAGGCAGACGTTTACAGCTTCGGTGTAGTTCTGCTGGAAATAGTCTCGGGGAGACAGA
rJMSF041P09+          AAAAGGCAGACGTTTACAGCTTCGGTGTAGTTCTGCTGGAAATAGTCTCGGGGAGACAGA
rJMSF027E05+          AAAAGGCAGACGTTTACAGCTTCGGTGTAGTTCTGCTGGAAATAGTCTCGGGGAGACAGA
                      ____________________________________________________________
consensus             AAAAGGCAGACGTTTACAGCTTCGGTGTAGTTCTGCTGGAAATAGTCTCGGGGAGACAGA
 
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JMSF027E05-           ATAACAGGAGCAAGGCCACGGAATACACAGACAGCTTGGTGAATATAGCTTGGATGCACT
rJMSF041P09+          ATAACAGGAGCAAGGCCACGGAATACACAGACAGCTTGGTGAATATAGCTTGGATGCACT
rJMSF027E05+          ATAACAGGAGCAAGGCCACGGAATACACAGACAGCTTGGTGAATATAGCTTGGATGCACT
                      ____________________________________________________________
consensus             ATAACAGGAGCAAGGCCACGGAATACACAGACAGCTTGGTGAATATAGCTTGGATGCACT
 
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JMSF027E05-           TCCAACAAGGGACAGTGAACGAGCTGTTCGACCCGAACCTAATGCTGCATAACTACCATA
rJMSF041P09+          TCCAACAAGGGACAGTGAACGAGCTGTTCGACCCGAACCTAATGCTGCATAACTACCATA
rJMSF027E05+          TCCAACAAGGGACAGTGAACGAGCTGTTCGACCCGAACCTAATGCTGCATAACTACCATA
                      ____________________________________________________________
consensus             TCCAACAAGGGACAGTGAACGAGCTGTTCGACCCGAACCTAATGCTGCATAACTACCATA
 
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JMSF027E05-           A--TCAATGTCAAAAACGAGGTCCTGAGGGTGGTCCATATCGGGCTGCTGTGCACCCAAG
rJMSF041P09+          ACATCAATGTCAAAAACGAGGTCCTGAGGGTGGTCCATATCGGGCTGCTGTGCACCCAAG
rJMSF027E05+          A--TCAATGTCAAAAACGAGGTCCTGAGGGTGGTCCATATCGGGCTGCTGTGCACCCAAG
                      ____________________________________________________________
consensus             A--TCAATGTCAAAAACGAGGTCCTGAGGGTGGTCCATATCGGGCTGCTGTGCACCCAAG
 
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JMSF027E05-           AGGCGCCATCGCTGAGGCCATCCATGTCCAAGGCATTGCAGATGCTCGTGAAGAAGGAGG
rJMSF041P09+          AGGCGCCATCGCTGAGGCCATCCATGTCCAAGGCATTGCAGATGCTCGTGAAGAAGGAGG
rJMSF027E05+          AGGCGCCATCGCTGAGGCCATCCATGTCCAAGGCATTGCAGATGCTCGTGAAGAAGGAGG
                      ____________________________________________________________
consensus             AGGCGCCATCGCTGAGGCCATCCATGTCCAAGGCATTGCAGATGCTCGTGAAGAAGGAGG
 
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JMSF027E05-           AGCTGCCAGCGCCCACGAATCCTCCCTTCGTGGACGAGAAAACCATGGAGCTAAACGATG
rJMSF041P09+          AGCTGCCAGCGCCCACGAATCCTCCCTTCGTGGACGAGAAAACCATGGAGCTAAACGATG
rJMSF027E05+          AGCTGCCAGCGCCCACGAATCCTCCCTTCGTGGACGAGAAAACCATGGAGCTAAACGATG
                      ____________________________________________________________
consensus             AGCTGCCAGCGCCCACGAATCCTCCCTTCGTGGACGAGAAAACCATGGAGCTAAACGATG
 
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JMSF027E05-           GCTGGGATAACCAGTCTTTCCCGCTCAGAGGAAGCGAGTCTGCCTCCGTTGCCAGCGTTT
rJMSF041P09+          GCTGGGATAACCAGTCTTTCCCGCTCAGAGGAAGCGAGTCTGCCTCCGTTGCCAGCGTTT
rJMSF027E05+          GCTGGGATAACCAGTCTTTCCCGCTCAGAGGAAGCGAGTCTGCCTCCGTTGCCAGCGTTT
                      ____________________________________________________________
consensus             GCTGGGATAACCAGTCTTTCCCGCTCAGAGGAAGCGAGTCTGCCTCCGTTGCCAGCGTTT
 
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JMSF027E05-           CGCACAGCTCT                                                 
rJMSF041P09+          CGCACAGCTCTTTCTACCCCAGATAAGACACGAAATCGACACACTTGCAGTATAATTGTA
rJMSF027E05+          CGCACAGCTCTTTCTACCCCAGATAAGACACGAAATCGACACACTTGCAGTATAATTGTA
                      ____________________________________________________________
consensus             CGCACAGCTCTTTCTACCCCAGATAAGACACGAAATCGACACACTTGCAGTATAATTGTA
 
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rJMSF041P09+          AGTTCCATCTTCATTTTGTTTCTACTTCACGCGATTCTTGGAAC                
rJMSF027E05+          AGTTCCATCTTCATTTTGTTTCTACTTCACGCGATTCTTGGAACATGTATTGTGAGATGT
                      ____________________________________________________________
consensus             AGTTCCATCTTCATTTTGTTTCTACTTCACGCGATTCTTGGAACATGTATTGTGAGATGT
 
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rJMSF027E05+          AGTTCTTTTATGGTTTTGTATAGAGACATGACTGGAGATTATAGTGTCATTGAGAGAAAA
                      ____________________________________________________________
consensus             AGTTCTTTTATGGTTTTGTATAGAGACATGACTGGAGATTATAGTGTCATTGAGAGAAAA