Contig 007119:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF042N02Sequence632000755 (2)ref|XP_009791857.1|3e-78PREDICTED: uncharacterized protein At1g01500 [Nicotiana sylvestris]586007119 (2)ref|XP_004248060.1|1e-35PREDICTED: uncharacterized protein At1g01500 isoform X2 [Solanum lycopersicum]
JMSF024M04Sequence670000755 (2)ref|XP_009791857.1|9e-81PREDICTED: uncharacterized protein At1g01500 [Nicotiana sylvestris]755007119 (2)ref|XP_009791857.1|1e-49PREDICTED: uncharacterized protein At1g01500 [Nicotiana sylvestris]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF024M04+ TCAGGTTAGCCCNCGAAAGAAGNTGTTGAGGCAGG
                      ____________________________________________________________
consensus TCAGGTTAGCCCNCGAAAGAAGNTGTTGAGGCAGG
 
. : . : . : . : . : . :
rJMFF042N02+ GAAGGATCAAAGGAGTGTTAATG
rJMSF024M04+ GGATGCTGGATGCTATTCCGGAGGATGAGGAAATCTGGAAGGATCAAAGGAGTGTTAATG
                      ____________________________________________________________
consensus GGATGCTGGATGCTATTCCGGAGGATGAGGAAATCTGGAAGGATCAAAGGAGTGTTAATG
 
. : . : . : . : . : . :
rJMFF042N02+ GATTGGTTCTACAACGTAAAACACCGATAGCAGAGGCAGATATGGATGATTACGGTTTAG
rJMSF024M04+ GATTGGTTCTACAACGTAAAACACCGATAGCAGAGGCAGATATGGATGATTACGGTTTAG
                      ____________________________________________________________
consensus GATTGGTTCTACAACGTAAAACACCGATAGCAGAGGCAGATATGGATGATTACGGTTTAG
 
. : . : . : . : . : . :
rJMFF042N02+ ATGAGAAAGCTGTACATGGCTCATATTATGACGGAATGTACCCTGGTGAAGATGGGCAAT
rJMSF024M04+ ATGAGAAAGCTGTACATGGCTCATATTATGACGGAATGTACCCTGGTGAAGATGGGCAAT
                      ____________________________________________________________
consensus ATGAGAAAGCTGTACATGGCTCATATTATGACGGAATGTACCCTGGTGAAGATGGGCAAT
 
. : . : . : . : . : . :
rJMFF042N02+ TGTCCTGGTTTAATGCTGGCTTGAGGGTTGGCGTTGGAATAGGCCTTGGGATGTGCGTAG
rJMSF024M04+ TGTCCTGGTTTAATGCTGGCTTGAGGGTTGGCGTTGGAATAGGCCTTGGGATGTGCGTAG
                      ____________________________________________________________
consensus TGTCCTGGTTTAATGCTGGCTTGAGGGTTGGCGTTGGAATAGGCCTTGGGATGTGCGTAG
 
. : . : . : . : . : . :
rJMFF042N02+ GCGTTGGTATTGGTGTAGGACTTCTTATGCGATCTTATCAAGCAACCACCAAGAACCTAC
rJMSF024M04+ GCGTTGGTATTGGTGTAGGACTTCTTATGCGATCTTATCAAGCAACCACCAAGAACCTAC
                      ____________________________________________________________
consensus GCGTTGGTATTGGTGTAGGACTTCTTATGCGATCTTATCAAGCAACCACCAAGAACCTAC
 
. : . : . : . : . : . :
rJMFF042N02+ GAAGGAGGTTTTTCTAGATCTGCTGGTTTCAATGCTAAGAGTGGTAATATCCCATCCAGA
rJMSF024M04+ GAAGGAGGTTTTTCTAGATCTGCTGGTTTCAATGCTAAGAGTGGTAATATCCCATCCAGA
                      ____________________________________________________________
consensus GAAGGAGGTTTTTCTAGATCTGCTGGTTTCAATGCTAAGAGTGGTAATATCCCATCCAGA
 
. : . : . : . : . : . :
rJMFF042N02+ TTGGAATTGTAAACCTTTTCTGATCTTTTTTGAGTATTAGCAAGCATCAAAGTGGCTCTG
rJMSF024M04+ TTGGAATTGTAAACCTTTTCTGATCTTTTTTGAGTATTAGCAAGCATCAAAGTGGCTCTG
                      ____________________________________________________________
consensus TTGGAATTGTAAACCTTTTCTGATCTTTTTTGAGTATTAGCAAGCATCAAAGTGGCTCTG
 
. : . : . : . : . : . :
rJMFF042N02+ AGGACATGAAGATTGGAAATGTGATCATTTTGGACATGTTTTGGCAGCTGCTCAAGTCTT
rJMSF024M04+ AGGACATGAAGATTGGAAATGTGATCATTTTGGACATGTTTTGGCAGCTGCTCAAGTCTT
                      ____________________________________________________________
consensus AGGACATGAAGATTGGAAATGTGATCATTTTGGACATGTTTTGGCAGCTGCTCAAGTCTT
 
. : . : . : . : . : . :
rJMFF042N02+ CAACCTTATATTGTAAGTTGGCTATAGTGAAAGGATAGTAGGCAGCAAATAATAGCAATG
rJMSF024M04+ CAACCTTATATTGTAAGTTGGCTATAGTGAAAGGATAGTAGGCAGCAAATAATAGCAATG
                      ____________________________________________________________
consensus CAACCTTATATTGTAAGTTGGCTATAGTGAAAGGATAGTAGGCAGCAAATAATAGCAATG
 
. : . : . : . : . : . :
rJMFF042N02+ ATGTTAGTAGTGGGGTTGTTTAAAGTGTATGTAGTTGAGCATTTGTGTAAATATTTGCTT
rJMSF024M04+ ATGTTAGTAGTGGGGTTGTTTAAAGTGTATGTAGTTGAGCATTTGTGTAAATATTTGCTT
                      ____________________________________________________________
consensus ATGTTAGTAGTGGGGTTGTTTAAAGTGTATGTAGTTGAGCATTTGTGTAAATATTTGCTT
 
. : . : . : . : . : . :
rJMFF042N02+ GGTTAGAAGAGTGTTTTTGTTGT
rJMSF024M04+ GGTTAGAAGAGTGTTTTTGTTGTTAGTGCCATTCTCTTGTGATTGGGTTTGCATAGCTTA
                      ____________________________________________________________
consensus GGTTAGAAGAGTGTTTTTGTTGTTAGTGCCATTCTCTTGTGATTGGGTTTGCATAGCTTA
 
. : . : . : . : . : . :
rJMSF024M04+ CATTTGTGATTCAATTTTCCCCTTAAAAAAGTGATGAGGTAGGGTAAAGTGTGTGAAGCT
                      ____________________________________________________________
consensus CATTTGTGATTCAATTTTCCCCTTAAAAAAGTGATGAGGTAGGGTAAAGTGTGTGAAGCT