| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMSF003A20 | Sequence | 320 | 013222 (4) | 737 | 007109 (3) | ref|XP_006341422.1| | 2e-99 | PREDICTED: protein ASPARTIC PROTEASE IN GUARD CELL 2-like [Solanum tuberosum] | |||
| JMSF022B20 | Sequence | 648 | 013222 (4) | ref|XP_009774796.1| | 5e-37 | PREDICTED: protein ASPARTIC PROTEASE IN GUARD CELL 2-like [Nicotiana sylvestris | 721 | 007109 (3) | ref|XP_006341422.1| | 6e-86 | PREDICTED: protein ASPARTIC PROTEASE IN GUARD CELL 2-like [Solanum tuberosum] |
| JMSF039B11 | Sequence | 683 | 013222 (4) | ref|XP_009774796.1| | 4e-62 | PREDICTED: protein ASPARTIC PROTEASE IN GUARD CELL 2-like [Nicotiana sylvestris | 662 | 007109 (3) | ref|XP_006341422.1| | 2e-79 | PREDICTED: protein ASPARTIC PROTEASE IN GUARD CELL 2-like [Solanum tuberosum] |
This contig is upended
. : . : . : . : . : . :
rJMSF003A20+ GAGGAGTGATGTGTCTCTCATTTCTCAAACCAAAGATGTTTTTGGAGGGGTTTTCTC
____________________________________________________________
consensus GAGGAGTGATGTGTCTCTCATTTCTCAAACCAAAGATGTTTTTGGAGGGGTTTTCTC
. : . : . : . : . : . :
rJMSF003A20+ CTACTGCTTACCTTCATCTCAAGCCGATGATTCCGGCTCTCTCGTGTTTGGTGAAAATCC
rJMSF039B11+ TTTGGTGAAAATCC
rJMSF022B20+ TACCTTCATCTCAAGCCGATGATTCCGGCTCTCTCGTGTTTGGTGAAAATCC
____________________________________________________________
consensus CTACTGCTTACCTTCATCTCAAGCCGATGATTCCGGCTCTCTCGTGTTTGGTGAAAATCC
. : . : . : . : . : . :
rJMSF003A20+ ATTGGCTTTAAAGAACTCGACCCCCATATCTTACGCTGCCATGCTTCAGAACCCGCAGCT
rJMSF039B11+ ATTGGCTTTAAAGAACTCGACCCCCATATCTTACGCTGCCATGCTTCAGAACCCGCAGCT
rJMSF022B20+ ATTGGCTTTAAAGAACTCGACCCCCATATCTTACGCTGCCATGCTTCAGAACCCGCAGCT
____________________________________________________________
consensus ATTGGCTTTAAAGAACTCGACCCCCATATCTTACGCTGCCATGCTTCAGAACCCGCAGCT
. : . : . : . : . : . :
rJMSF003A20+ CTACACCTTCTACACCCTCAACCTCACCGGCACCAGCGTGGGGGGAGTACAGGTTCAAAC
rJMSF039B11+ ATACACCTTCTACACCCTCAACCTCACCGGCACCAGCGTGGGGGGAGTACAGGTTCAAAC
rJMSF022B20+ CTACACCTTCTACACCCTCAACCTCACCGGCACCAGCGTGGGGGGAGTACAGGTTCAAAC
____________________________________________________________
consensus CTACACCTTCTACACCCTCAACCTCACCGGCACCAGCGTGGGGGGAGTACAGGTTCAAAC
. : . : . : . : . : . :
rJMSF003A20+ CTCGGGTTCTGGCGGCAGCAACGGCGGCATAATTCTCGACTCCGGGACGGTCATCACGAG
rJMSF039B11+ CTCGGGTTCTGGCGGCAGCAACGGCGGCATAATTCTCGACTCCGGGACGGTCATCACGAG
rJMSF022B20+ CTCGGGTTCTGGCGGCAGCAACGGCGGCATAATTCTCGACTCCGGGACGGTCATCACGAG
____________________________________________________________
consensus CTCGGGTTCTGGCGGCAGCAACGGCGGCATAATTCTCGACTCCGGGACGGTCATCACGAG
. : . : . : . : . : . :
rJMSF003A20+ GCTTCCCCCGTCCACCTACAAAGCCGTGAAGGCCGAGTTCTTGAAACAGTTCTCGGGCTA
rJMSF039B11+ GCTTCCCCCGTCCACCTACAAAGCCGTGAAGGCCGAGTTCTTGAAACAGTTCTCGGGCTA
rJMSF022B20+ GCTTCCCCCGTCCACCTACAAAGCCGTGAAGGCCGAGTTCTTGAAACAGTTCTCGGGCTA
____________________________________________________________
consensus GCTTCCCCCGTCCACCTACAAAGCCGTGAAGGCCGAGTTCTTGAAACAGTTCTCGGGCTA
. : . : . : . : . : . :
rJMSF003A20+ CCCTCTCGCACCGGGCTTCTCAATCCTCGACACTTGCTTTGATCTCTCCACCTACGATGA
rJMSF039B11+ CCCTCTCGCACCGGGCTTCTCAATCCTCGACACTTGCTTTGATCTCTCCACCTACGATGA
rJMSF022B20+ CCCTCTCGCACCGGGCTTCTCAATCCTCGACACTTGCTTTGATCTCTCCACCTACGATGA
____________________________________________________________
consensus CCCTCTCGCACCGGGCTTCTCAATCCTCGACACTTGCTTTGATCTCTCCACCTACGATGA
. : . : . : . : . : . :
rJMSF003A20+ AGTGAACATCCCCACCGTCAAACTGCACTTCGACGGTGGCGGGGCCGAGCTGAGCGTGGA
rJMSF039B11+ AGTGAACATCCCCACCGTCAAACTGCACTTCGACGGTGGCGGGGCCGAGCTGAGCGTGGA
rJMSF022B20+ AGTGAACATCCCCACCGTCAAACTGCACTTCGACGGTGGCGGGGCCGAGCTGAGCGTGGA
____________________________________________________________
consensus AGTGAACATCCCCACCGTCAAACTGCACTTCGACGGTGGCGGGGCCGAGCTGAGCGTGGA
. : . : . : . : . : . :
rJMSF003A20+ CGCCACCGGGATTTTCTACTTCGCCAGGAGAGACGCTTCTCAGGTCTGTTTGGCCCTGGC
rJMSF039B11+ CGCCACCGGGATTTTCTACTTCGCCAGGAGAGACGCTTCTCAGGTCTGTTTGGCCCTGGC
rJMSF022B20+ CGCCACCGGGATTTTCTACTTCGCCAGGAGAGACGCTTCTCAGGTCTGTTTGGCCCTGGC
____________________________________________________________
consensus CGCCACCGGGATTTTCTACTTCGCCAGGAGAGACGCTTCTCAGGTCTGTTTGGCCCTGGC
. : . : . : . : . : . :
rJMSF003A20+ AAGCCTCGCCTATGAAGCCGAGATCGGGATTATAGGAAACTATCAGCAGAGGAACACCAG
rJMSF039B11+ AAGCCTCGCCTATGAAGCCGAGATCGGGATTATAGGAAACTATCAGCAGAGGAACACCAG
rJMSF022B20+ AAGCCTCGCCTATGAAGCCGAGATCGGGATTATAGGAAACTATCAGCAGAGGAACACCAG
____________________________________________________________
consensus AAGCCTCGCCTATGAAGCCGAGATCGGGATTATAGGAAACTATCAGCAGAGGAACACCAG
. : . : . : . : . : . :
rJMSF003A20+ GGTCATCTACGACACGAAAAATTCACAAGTCGGGTTTGCAAAAGAGACCTGCAGCTTCAT
rJMSF039B11+ GGTCATCTACGACACGAAAAATTCACAAGTCGGGTTTGCAAAAGAGACCTGCAGCTTCAT
rJMSF022B20+ GGTCATCTACGACACGAAAAATTCACAAGTCGGGTTTGCAAAAGAGACCTGCAGCTTCAT
____________________________________________________________
consensus GGTCATCTACGACACGAAAAATTCACAAGTCGGGTTTGCAAAAGAGACCTGCAGCTTCAT
. : . : . : . : . : . :
rJMSF003A20+ GTAGACCAAACTGTAATGGCTTATAACTTCCCAAA-CAAGCCTTAAGAAGATTCTTGGTA
rJMSF039B11+ GTAGACCAAACTGTAATGGCTTATAACTTCCCAAAGCAAGCCTTAAGAAGATTCTTGGTA
rJMSF022B20+ GTAGACCAAACTGTAATGGCTTATAACTTCCCAAA-CAAGCCTTAAGAAGATTCTTGGTA
____________________________________________________________
consensus GTAGACCAAACTGTAATGGCTTATAACTTCCCAAA-CAAGCCTTAAGAAGATTCTTGGTA
. : . : . : . : . : . :
rJMSF003A20+ TAGAAATATATCTGC
rJMSF039B11+ TAGAAATATATCTGCAGTTTTACCTGCTAAAAACTGCAGAATAGATAA
rJMSF022B20+ TAGAAATATATCTGCAGTTTTACCTGCTAAAAACTGCAGAATAGATAATGTATGCAAGTT
____________________________________________________________
consensus TAGAAATATATCTGCAGTTTTACCTGCTAAAAACTGCAGAATAGATAATGTATGCAAGTT