clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF003J19 | Sequence | 542 | 015216 | ref|XP_004248027.1| | 5e-29 | PREDICTED: probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransfe | 684 | 007107 (6) | ref|XP_011084145.1| | 1e-117 | PREDICTED: probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransfe |
JMFS080D04 | Sequence | 510 | 007107 (6) | ref|XP_011084145.1| | 6e-78 | PREDICTED: probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransfe | |||||
JMSF020O19 | Sequence | 664 | 003864 (15) | ref|XP_009762058.1| | 2e-46 | PREDICTED: probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransfe | 795 | 007107 (6) | ref|XP_011084145.1| | 4e-155 | PREDICTED: probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransfe |
JMSF021O19 | Sequence | 651 | 003864 (15) | ref|XP_009762058.1| | 1e-43 | PREDICTED: probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransfe | 739 | 007107 (6) | ref|XP_011084145.1| | 1e-141 | PREDICTED: probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransfe |
JMSF033D02 | Sequence | 665 | 003864 (15) | ref|XP_009762058.1| | 2e-45 | PREDICTED: probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransfe | 747 | 007107 (6) | ref|XP_011084145.1| | 8e-137 | PREDICTED: probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransfe |
JMSF037I01 | Sequence | 665 | 003864 (15) | ref|XP_009762058.1| | 8e-48 | PREDICTED: probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransfe | 147 | 007107 (6) | ref|XP_010278452.1| | 9e-16 | PREDICTED: probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransfe |
This contig is upended
. : . : . : . : . : . :
rJMSF020O19+ GTAAATGATTATNAG
____________________________________________________________
consensus GTAAATGATTATNAG
. : . : . : . : . : . :
rJMSF020O19+ CAGAAAAATTGTGATGTACTAGATCCAGACTGCCTACCCCAACGCTCAGATTATGGCCTT
rJMSF021O19+ ACGCTCAGATTATGGCCTT
____________________________________________________________
consensus CAGAAAAATTGTGATGTACTAGATCCAGACTGCCTACCCCAACGCTCAGATTATGGCCTT
. : . : . : . : . : . :
rJMSF033D02+ AAATTTATATTCGCTTGTTTCAATCAGCTCTACAAGATGGATCCAGAGATT
rJMSF020O19+ CCAGAGGATAAATTTATATTCGCTTGTTTCAATCAGCTCTACAAGATGGATCCAGAGATT
rJMSF021O19+ CCAGAGGATAAAATTATATTCGCTTGTTTCAATCAGCTCTACAAGATGGATCCAGAGANT
____________________________________________________________
consensus CCAGAGGATAAATTTATATTCGCTTGTTTCAATCAGCTCTACAAGATGGATCCAGAGATT
. : . : . : . : . : . :
rJMSF033D02+ TGTACAACTTGGTGCAACATTCTCAAGCGTGTACCAAACAGTGCACTTTGGCTCCTCAGA
rJMSF020O19+ TGTACAACTTGGTGCAACATTCTCAAGCGTGTACCAAACAGTGCACTTTGGCTCCTCAGA
rJMFF003J19+ TCAAGCGTGTACCAAACAGTGCACTTTGGCTCCTCAGA
rJMSF021O19+ TGTACAACTTGGTGCAACATTNTCAAGCGTGTACCAAACAGTGCACTTTGGCTCCTCAGA
____________________________________________________________
consensus TGTACAACTTGGTGCAACATTCTCAAGCGTGTACCAAACAGTGCACTTTGGCTCCTCAGA
. : . : . : . : . : . :
rJMSF033D02+ TTTCCAGCTGCGGGTGAACTGAGGCTTCGTGCATATGCTGCTGCACAAGGTGTACAACCA
rJMSF020O19+ TTTCCAGCTGCGGGTGAACTGAGGCTTCGTGCATATGCTGCTGCACAAGGTGTACAACCA
rJMFF003J19+ TTTCCAGCTGCGGGTGAACTGAGGCTTCGTGCATATGCTGCTGCACAAGGTGTACAACCA
rJMSF021O19+ TTTCCAGCTGCGGGTGAACTGAGGCTTCGTGCATATGCTGCTGCACAAGGTGTACAACCA
____________________________________________________________
consensus TTTCCAGCTGCGGGTGAACTGAGGCTTCGTGCATATGCTGCTGCACAAGGTGTACAACCA
. : . : . : . : . : . :
rJMSF033D02+ GACCAAATAATTTTCACCGATGTTGCTATGAAACAGGAGCATATTAGACGCAGTTCATTG
rJMSF020O19+ GACCAAATAATTTTCACCGATGTTGCTATGAAACAGGAGCATATTAGACGCAGTTCATTG
rJMFF003J19+ GACCAAATAATTTTCACCGATGTTGCTATGAAACAGGAGCATATTAGACGCAGTTCATTG
rJMSF021O19+ GACCAAATAATTTTCACCGATGTTGCTATGAAACAGGAGCATATTAGACGCAGTTCATTG
____________________________________________________________
consensus GACCAAATAATTTTCACCGATGTTGCTATGAAACAGGAGCATATTAGACGCAGTTCATTG
. : . : . : . : . : . :
rJMSF033D02+ GCAGATTTATTTCTTGACACGCCATTGTGCAATGCGCACACAACTGGAACAGATGTTCTT
rJMSF020O19+ GCAGATTTATTTCTTGACACGCCATTGTGCAATGCGCACACAACTGGAACAGATGTTCTT
JMFS080D04+ TATTTCTTGACACGCCATTGTGCAATGCGCACACAACTGGAACAGATGTTCTT
rJMFF003J19+ GCAGATTTATTTCTTGACACGCCATTGTGCAATGCGCACACAACTGGAACAGATGTTCTT
rJMSF021O19+ GCAGATTTATTTCTTGACACGCCATTGTGCAATGCGCACACAACTGGAACAGATGTTCTT
____________________________________________________________
consensus GCAGATTTATTTCTTGACACGCCATTGTGCAATGCGCACACAACTGGAACAGATGTTCTT
. : . : . : . : . : . :
rJMSF033D02+ TGGGCTGGGCTACCAATGGTGACACTACCCCTTGAGAAAATGGCTACACGAGTTGCTGGT
rJMSF020O19+ TGGGCTGGGCTACCAATGGTGACACTACCCCTTGAGAAAATGGCTACACGAGTTGCTGGT
JMFS080D04+ TGGGCTGGGCTACCAATGGTGACACTACCCCTTGAGAAAATGGCTACACGAGTTGCTGGT
rJMFF003J19+ TGGGCTGGGCTACCAATGGTGACACTACCCCTTGAGAAAATGGCTACACGAGTTGCTGGT
rJMSF021O19+ TGGGCTGGGCTACCAATGGTGACACTACCCCTTGAGAAAATGGCTACACGAGTTGCTGGT
____________________________________________________________
consensus TGGGCTGGGCTACCAATGGTGACACTACCCCTTGAGAAAATGGCTACACGAGTTGCTGGT
. : . : . : . : . : . :
rJMSF033D02+ TCCCTGTGTTTGGCCACAGGACTAGGGGATGAGATGATTGTCAACAATATGAAGGAGTAC
rJMSF020O19+ TCCCTGTGTTTGGCCACAGGACTAGGGGATGAGATGATTGTCAACAATATGAAGGAGTAC
JMFS080D04+ TCCCTGTGTTTGGCCACAGGACTAGGGGATGAGATGATTGTCAACAATATGAAGGAGTAC
rJMFF003J19+ TCCCTGTGTTTGGCCACAGGACTAGGGGATGAGATGATTGTCAACAATATGAAGGAGTAC
rJMSF021O19+ TCCCTGTGTTTGGCCACAGGACTAGGGGATGAGATGATTGTCAACAATATGAAGGAGTAC
____________________________________________________________
consensus TCCCTGTGTTTGGCCACAGGACTAGGGGATGAGATGATTGTCAACAATATGAAGGAGTAC
. : . : . : . : . : . :
rJMSF033D02+ GAGGAGAAGGCAGTATCGCTGGCACTTGATCGCCCAAAACTACAGGATCTCACCAATAGA
rJMSF020O19+ GAGGAGAAGGCAGTATCGCTGGCACTTGATCGCCCAAAACTACAGGATCTCACCAATAGA
JMFS080D04+ GAGGAGAAGGCAGTATCGCTGGCACTTGATCGCCCAAAACTACAGGATCTCACCAATAGA
rJMFF003J19+ GAGGAGAAGGCAGTATCGCTGGCACTTGATCGCCCAAAACTACAGGATCTCACCAATAGA
rJMSF021O19+ GAGGAGAAGGCAGTATCGCTGGCACTTGATCGCCCAAAACTACAGGATCTCACCAATAGA
____________________________________________________________
consensus GAGGAGAAGGCAGTATCGCTGGCACTTGATCGCCCAAAACTACAGGATCTCACCAATAGA
. : . : . : . : . : . :
rJMSF033D02+ CTAAAGGCTGCACGCATCACTTGCCCTCTGTTTGATACAGAACGCTGGGTGAGGAATCTG
rJMSF020O19+ CTAAAGGCTGCACGCATCACTTGCCCTCTGTTTGATACAGAACGCTGGGTGAGGAATCTG
JMFS080D04+ CTAAAGGCTGCACGCATCACTTGCCCTCTGTTTGATACAGAACGCTGGGTGAGGAATCTG
rJMFF003J19+ CTAAAGGCTGCACGCATCACTTGCCCTCTGTTTGATACAGAACGCTGGGTGAGGAATCTG
rJMSF037I01+ TGATACAGAACGNNGGGTGAGGAATCTG
rJMSF021O19+ CTAAAGGCTGCACGCATCACTTGCCCTCTGTTTGATACAGAACGCTGGGTGAGGAATCTG
____________________________________________________________
consensus CTAAAGGCTGCACGCATCACTTGCCCTCTGTTTGATACAGAACGCTGGGTGAGGAATCTG
. : . : . : . : . : . :
rJMSF033D02+ GAGCGGGCTTATTTTAAGATGTGGAATCTGTACTGTTCCGGCCAACATCCTCTGCCCTTC
rJMSF020O19+ GAGCGGGCTTATTTTAAGATGTGGAATCTGTACTGTTCCGGCCAACATCCTCTGCCCTTC
JMFS080D04+ GAGCGGGCTTATTTTAAGATGTGGAATCTGTACTGTTCCGGCCAACATCCTCTGCCCTTC
rJMFF003J19+ GAGCGGGCTTATTTTAAGATGTGGAATCTGTACTGTTCCGGCCAACATCCTCTGCCCTTC
rJMSF037I01+ GAGCGGGCNTATTTTAAGATGTGGAATATGTACTGTTCCGGCCNACATCCTCTGCCCTTC
rJMSF021O19+ GAGCGGGCTTATTTTAAGATGTGGAATCTGTACTGTTCCGGCCAACATCCTCTGCCCTTC
____________________________________________________________
consensus GAGCGGGCTTATTTTAAGATGTGGAATCTGTACTGTTCCGGCCAACATCCTCTGCCCTTC
. : . : . : . : . : . :
rJMSF033D02+ AAAGTTATAGAGAATGATAAGGAATTCCC
rJMSF020O19+ AAAGTTATAGAGAATGATAAGGAATTCCCGTATGACCGTTAGATGTGTAGTAAAATATAC
JMFS080D04+ AAAGTTATAGAGAATGATAAGGAATTCCC
rJMFF003J19+ AAAGTTATAGAGAATGATAAGGAATTCCC
rJMSF037I01+ AAAGTNATNGAGAATGATANGGAATTCCNGTATGACCNTNAGANGTGTAGTAAAATATA
rJMSF021O19+ AAAGTTATAGAGAATGATAAGGAATTCCCGTATGACCGTTAGATGTGTAGTAAAATATAC
____________________________________________________________
consensus AAAGTTATAGAGAATGATAAGGAATTCCCGTATGACCGTTAGATGTGTAGTAAAATATAC
. : . : . : . : . : . :
rJMSF020O19+ TGAGGCTGTAGATGTAACAAACAAGAATGTAAAGAGTTACTTATTATGGTCTAGATATGT
rJMSF021O19+ TGAGGCTGTAGATGTAACAAACAAGAATGTAAAGAGTTACTTATTATGGTCTAGATATGT
____________________________________________________________
consensus TGAGGCTGTAGATGTAACAAACAAGAATGTAAAGAGTTACTTATTATGGTCTAGATATGT