clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMSF002D21 | Sequence | 349 | 000551 (5) | 753 | 007103 (4) | ref|XP_010648052.1| | 3e-61 | PREDICTED: L-type lectin-domain containing receptor kinase IX.1-like [Vitis vin | |||
JMSF010D12 | Sequence | 268 | 000551 (5) | ref|XP_009781157.1| | 6e-05 | PREDICTED: L-type lectin-domain containing receptor kinase IX.1-like [Nicotiana | 776 | 007103 (4) | ref|XP_002522044.1| | 2e-27 | kinase, putative [Ricinus communis] gb|EEF40244.1| kinase, putative [Ricinus com |
JMSF021C06 | Sequence | 661 | 000551 (5) | ref|XP_009781157.1| | 6e-46 | PREDICTED: L-type lectin-domain containing receptor kinase IX.1-like [Nicotiana | 782 | 007103 (4) | ref|XP_002522044.1| | 2e-32 | kinase, putative [Ricinus communis] gb|EEF40244.1| kinase, putative [Ricinus com |
JMSF031F10 | Sequence | 660 | 000551 (5) | ref|XP_009781157.1| | 3e-45 | PREDICTED: L-type lectin-domain containing receptor kinase IX.1-like [Nicotiana | 757 | 007103 (4) | ref|XP_009781157.1| | 2e-45 | PREDICTED: L-type lectin-domain containing receptor kinase IX.1-like [Nicotiana |
This contig is upended
. : . : . : . : . : . :
rJMSF002D21+ TAAGTCCAGCA
____________________________________________________________
consensus TAAGTCCAGCA
. : . : . : . : . : . :
rJMSF002D21+ ATGTCCTGTTGGATTCGTGCTTCAATGCTAAACTAGGCGATTTTGGGTTAGCCTGGCTTG
____________________________________________________________
consensus ATGTCCTGTTGGATTCGTGCTTCAATGCTAAACTAGGCGATTTTGGGTTAGCCTGGCTTG
. : . : . : . : . : . :
rJMSF002D21+ TTGACCATGAAAAACCACCCGAAAAAACCTTAGTTGGAGGGACACTAGGGTATGTCGCCC
rJMSF031F10+ TAGGGTACGTCGCCC
____________________________________________________________
consensus TTGACCATGAAAAACCACCCGAAAAAACCTTAGTTGGAGGGACACTAGGGTATGTCGCCC
. : . : . : . : . : . :
rJMSF002D21+ CAGAATGTTATTTCACATTAAAGACTACCAAAGAGTCAGATGTGTATAGTTTTGGAATTG
rJMSF031F10+ CAGAATGTTATCTCACATTAAAGACTACCAAAGAATCAGATGTGTATAGTTTTGGAATTG
____________________________________________________________
consensus CAGAATGTTATTTCACATTAAAGACTACCAAAGAGTCAGATGTGTATAGTTTTGGAATTG
. : . : . : . : . : . :
rJMSF002D21+ TCGCATTAGAAATTGCATGTGGACAAAGAGCAATAATTTCGTTAGATGAACCAGGAGGTT
rJMSF031F10+ TCGCATTAGAAATTGCATGTGGACAAAGAGCAATAGTTTCTGTTGAAGAAACAGAAGATT
rJMSF010D12+ TT
rJMSF021C06+ GGACAAAGAGCAATAGTTTCTGTTGAAGAAACAGAAGATT
____________________________________________________________
consensus TCGCATTAGAAATTGCATGTGGACAAAGAGCAATAGTTTCTGTTGAAGAAACAGAAGATT
. : . : . : . : . : . :
rJMSF002D21+ TCAAAAGGTTGGTGGAATGGGTTTGGGATTTGTATAGAATGGGAAAGGTAATGGAAGCTG
rJMSF031F10+ TCAAAAGGTTGGTGGAATGGGTTTGGGATTTGTATGGAATGGGAAAGCTAATGGAAGCTG
rJMSF010D12+ TCAAAAGGTTGGTGGAATGGGTTTGGGATTTGTATGGAATGGGAAAGCTAATGGAAGCTG
rJMSF021C06+ TCAAAAGGTTGGTGGAATGGGTTTGGGATTTGTATGGAATGGGAAAGCTAATGGAAGCTG
____________________________________________________________
consensus TCAAAAGGTTGGTGGAATGGGTTTGGGATTTGTATGGAATGGGAAAGCTAATGGAAGCTG
. : . : . : . : . : . :
rJMSF002D21+ CAGATCCTAAGCTATGCGGAAACTTTGAGAGGCAAGAAATGGAACAATTAATGATGATCG
rJMSF031F10+ CAGATCCTAAGCTATGCGGAAACTTTGAGAGGCAAGAAATGGAACAATTAATGATGATCG
rJMSF010D12+ CAGATCCTAAGCTATGCGGAAACTTTGAGAGGCAAGAAATGGAACAATTAATGATGATCG
rJMSF021C06+ CAGATCCTAAGCTATGCGGAAACTTTGAGAGGCAAGAAATGGAACAATTAATGATGATCG
____________________________________________________________
consensus CAGATCCTAAGCTATGCGGAAACTTTGAGAGGCAAGAAATGGAACAATTAATGATGATCG
. : . : . : . : . : . :
rJMSF002D21+ GGCTATGGTGTGCTCATCCTGATAGTAAATTTCGACCAAAAATAAGTCAAGCTTTACATG
rJMSF031F10+ GGCTATGGTGTGCTCATCCTGATAGTAAATTTCGACCAAAAATAAGCCAAGCTTTACATG
rJMSF010D12+ GGCTATGGTGTGCTCATCCTGATAGTAAATTTCGACCAAAAATAAGCCAAGCTTTACATG
rJMSF021C06+ GGCTATGGTGTGCTCATCCTGATAGTAAATTTCGACCAAAAATAAGCCAAGCTTTACATG
____________________________________________________________
consensus GGCTATGGTGTGCTCATCCTGATAGTAAATTTCGACCAAAAATAAGCCAAGCTTTACATG
. : . : . : . : . : . :
rJMSF002D21+ GTCTTCAATTCCAAGTACAGGTGCCCACCCTTCCATCAGAAATGCCAGTTTACTCAACTT
rJMSF031F10+ GTCTTCAACTCCAAGTACAGGTGCCCACCCTTCCACCAGAAATGCCAGTTTACTCAACTT
rJMSF010D12+ GTCTTCAACTCCAAGTACAGGTGCCCACCCTTCCACCAGAAATGCCAGTTTACTCAACTT
rJMSF021C06+ GTCTTCAACTCCAAGTACAGGTGCCCACCCTTCCACCAGAAATGCCAGTTTACTCAACTT
____________________________________________________________
consensus GTCTTCAACTCCAAGTACAGGTGCCCACCCTTCCACCAGAAATGCCAGTTTACTCAACTT
. : . : . : . : . : . :
rJMSF002D21+ CTTATAATGTGCCATCCTTTTCATGCTTGAGTTCACAGATATTTGAGGGCTATACGAGTC
rJMSF031F10+ CTTATAATGTTCCATCCTTTTCAAATTTGCGTTCACAGGTATTTGAGGGCTATACGAGTC
rJMSF010D12+ CTTATAATGTTCCATCCTTTTCAAATTTGCGTTCACAGGTATTTGAGGGCTATACGAGTC
rJMSF021C06+ CTTATAATGTTCCATCCTTTTCAAATTTGCGTTCACAGGTATTTGAGGGCTATACGAGTC
____________________________________________________________
consensus CTTATAATGTTCCATCCTTTTCAAATTTGCGTTCACAGGTATTTGAGGGCTATACGAGTC
. : . : . : . : . : . :
rJMSF002D21+ CCAGCA
rJMSF031F10+ CCAGCAACAACAGTTATCCCTCGCAAGAAACTTCATCTTCGGTCATGGATGCCTTACATT
rJMSF010D12+ CCAGCAACAACAGTTATCCCTCGCAAGAAACTTCATCTTCGGTCATGGATGCCTTACATT
rJMSF021C06+ CCAGCAACAACAGTTATCCCTCGCAAGAAACTTCATCTTCGGTCATGGATGCCTTACATT
____________________________________________________________
consensus CCAGCAACAACAGTTATCCCTCGCAAGAAACTTCATCTTCGGTCATGGATGCCTTACATT
. : . : . : . : . : . :
rJMSF031F10+ CGCACACACACTGATTTCACCATCACCAACCTTCTTGGCTTCCCTATCTGAATTTCAAAC
rJMSF010D12+ CGCACACACACTGATTTCACCATCACCAACCTTCTTGGCTTCCCTATCTGAATTTCAAAC
rJMSF021C06+ CGCACACACACTGATTTCACCATCACCAACCTTCTTGGCTTCCCTATCTGAATTTCAAAC
____________________________________________________________
consensus CGCACACACACTGATTTCACCATCACCAACCTTCTTGGCTTCCCTATCTGAATTTCAAAC
. : . : . : . : . : . :
rJMSF031F10+ AAAAACACTACTTGCTGTGTCTGTTAAAGATACATATTTCTGTGTGCTAGCTATGAAGTA
rJMSF010D12+ AAAAACACTACTTGCTGTGTCTGTTAAAGATACATATTTCTGTGTGCTAGCTATGAAGTA
rJMSF021C06+ AAAAACACTACTTGCTGTGTCTGTTAAAGATACATATTTCTGTGTGCTAGCTATGAAGTA
____________________________________________________________
consensus AAAAACACTACTTGCTGTGTCTGTTAAAGATACATATTTCTGTGTGCTAGCTATGAAGTA
. : . : . : . : . : . :
rJMSF031F10+ ATTAGCCGTGTCATTCATTATCTCTTGTATTTATGCTTTATCTTTTCTCTGTGTTTACAA
rJMSF010D12+ ATTAGCCGTGTCATTCATTATCTCTTGTATTTATGCTTTATCTTTTCTCTGTGTTTACAA
rJMSF021C06+ ATTAGCCGTGTCATTCATTATCTCTTGTATTTATGCTTTATCTTTTCTCTGTGTTTACAA
____________________________________________________________
consensus ATTAGCCGTGTCATTCATTATCTCTTGTATTTATGCTTTATCTTTTCTCTGTGTTTACAA
. : . : . : . : . : . :
rJMSF031F10+ TATAGTATAAGAACAGTGGTGATTGAAAATTAAATGTAAGAGTGTGAGATACTATTGTAG
rJMSF010D12+ TATAGTATAAGAACAGTGGTGATTGAAGATTAAATGTAAGAGTGTGAGATACTATTGTAG
rJMSF021C06+ TATAGTATAAGAACAGTGGTGATTGAAAATTAAATGTAAGAGTGTGAGATACTATTGTAG
____________________________________________________________
consensus TATAGTATAAGAACAGTGGTGATTGAAAATTAAATGTAAGAGTGTGAGATACTATTGTAG
. : . : . : . : . : . :
rJMSF031F10+ CAGAAGAAGGTTAATTATGT
rJMSF010D12+ CAGAAGAAGGTTAATTATGTTGAGTCTTAAGGTTTTAAGTATAGCTATAGAATTAGTGTG
rJMSF021C06+ CAGAAGAAGGTTAATTATGTTGAGTCTTAAGGTTTTAAGTATAGCTATAGAATTAGTGTG
____________________________________________________________
consensus CAGAAGAAGGTTAATTATGTTGAGTCTTAAGGTTTTAAGTATAGCTATAGAATTAGTGTG
. : . : . : . : . : . :
rJMSF010D12+ TTCTTCCATTATTGTTATTTTTGGCTCTTAAATAGGTCTTTTGTTTGTTGAACAACA
rJMSF021C06+ TTCTTCCATTATTGTTATTTTTGGCTCTTAAATAGGTCTTTTGTTTGTTGAACAACAATA
____________________________________________________________
consensus TTCTTCCATTATTGTTATTTTTGGCTCTTAAATAGGTCTTTTGTTTGTTGAACAACAATA