| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF050N24 | Sequence | 606 | 007090 (6) | ref|XP_009628077.1| | 1e-72 | PREDICTED: digalactosyldiacylglycerol synthase 2, chloroplastic [Nicotiana tome | 627 | 005569 (3) | ref|XP_009630574.1| | 6e-16 | PREDICTED: digalactosyldiacylglycerol synthase 2, chloroplastic-like [Nicotiana |
| JMFS062G02 | Sequence | 613 | 007090 (6) | ref|XP_009760237.1| | 2e-69 | PREDICTED: nematode resistance protein-like HSPRO2 [Nicotiana sylvestris] | |||||
| JMFS081A04 | Sequence | 630 | 007090 (6) | ||||||||
| JMSF007I14 | Sequence | 476 | 007090 (6) | ref|XP_009760237.1| | 8e-42 | PREDICTED: nematode resistance protein-like HSPRO2 [Nicotiana sylvestris] | 745 | 005569 (3) | ref|XP_009630574.1| | 2e-75 | PREDICTED: digalactosyldiacylglycerol synthase 2, chloroplastic-like [Nicotiana |
| JMSF009P24 | Sequence | 303 | 007090 (6) | 721 | 005569 (3) | ref|XP_009630574.1| | 6e-69 | PREDICTED: digalactosyldiacylglycerol synthase 2, chloroplastic-like [Nicotiana | |||
| JMSF019C06 | Sequence | 414 | 014639 | gb|AFQ23178.1| | 4e-26 | HSPRO [Nicotiana attenuata] | 769 | 007090 (6) | ref|XP_009760237.1| | 1e-112 | PREDICTED: nematode resistance protein-like HSPRO2 [Nicotiana sylvestris] |
This contig is upended
. : . : . : . : . : . :
JMFF050N24+ TTCCATGATGATACCATGTAAGATGCTCGGG
____________________________________________________________
consensus TTCCATGATGATACCATGTAAGATGCTCGGG
. : . : . : . : . : . :
JMFF050N24+ CTCCTCAAGGACAGCAATATCTGCCTCTTCGTCTGGAATTACAATTGTAATGTCCCCCGA
____________________________________________________________
consensus CTCCTCAAGGACAGCAATATCTGCCTCTTCGTCTGGAATTACAATTGTAATGTCCCCCGA
. : . : . : . : . : . :
JMFF050N24+ ACCAAGAATGCTCCTTTTCTCTATAGAGAACTTTCCTGGATAAAAACGCACACTAAAATT
____________________________________________________________
consensus ACCAAGAATGCTCCTTTTCTCTATAGAGAACTTTCCTGGATAAAAACGCACACTAAAATT
. : . : . : . : . : . :
JMFF050N24+ TGATGTGAACCCAGTCCTCTCTTCAACCCATCGAAGGACATATTGTTCTTGCTCAGAAGG
____________________________________________________________
consensus TGATGTGAACCCAGTCCTCTCTTCAACCCATCGAAGGACATATTGTTCTTGCTCAGAAGG
. : . : . : . : . : . :
JMFF050N24+ TGTATTAAACGTGATATTGTTGGGGAACAAGTGTTCTTGATCATTCAAAGACAGCCAAGG
____________________________________________________________
consensus TGTATTAAACGTGATATTGTTGGGGAACAAGTGTTCTTGATCATTCAAAGACAGCCAAGG
. : . : . : . : . : . :
JMFF050N24+ GACCACCAAAGTGACCTTCCTCGTCCCATCTTTGGCAAGATAGACAGCGCGAAACAGAGG
____________________________________________________________
consensus GACCACCAAAGTGACCTTCCTCGTCCCATCTTTGGCAAGATAGACAGCGCGAAACAGAGG
. : . : . : . : . : . :
JMFF050N24+ GTTGACAGCAGTTCCAGTCAACCACGGAATGCTTGCAGTAGTAAATATTGCAATATGTTG
____________________________________________________________
consensus GTTGACAGCAGTTCCAGTCAACCACGGAATGCTTGCAGTAGTAAATATTGCAATATGTTG
. : . : . : . : . : . :
JMFF050N24+ TTTCCTTTCCATTTACCATCAAACCAAATAGGTACACGCTTTCTACCCTACCACTCAGAT
JMSF009P24+ CATTTACCATCAAACCAAATAGGTACACGCTTTCTACCCTACCACTCAGAT
____________________________________________________________
consensus TTTCCTTTCCATTTACCATCAAACCAAATAGGTACACGCTTTCTACCCTACCACTCAGAT
. : . : . : . : . : . :
JMFF050N24+ CCAAAAAAACACACTTCCTGCAGCCACAAAATCCAAAGCTATTGCATGAATTTTGTGGGC
JMSF009P24+ CCAAAAAAACACACTTCCTGCAGCCACAAAATCCAAAGCTATTGCATGAATTTTGTGGGC
____________________________________________________________
consensus CCAAAAAAACACACTTCCTGCAGCCACAAAATCCAAAGCTATTGCATGAATTTTGTGGGC
. : . : . : . : . : . :
JMFF050N24+ AAACAAACGAAGACTGGTCGAAACTTTTTCAGGCGGGGAGTTTC
JMSF009P24+ AAACAAACGAAGACTGGTCGAAACTTTTTCAGGCGGGGAGTTTCTGGAAGGAAGAAATCC
____________________________________________________________
consensus AAACAAACGAAGACTGGTCGAAACTTTTTCAGGCGGGGAGTTTCTGGAAGGAAGAAATCC
. : . : . : . : . : . :
JMSF009P24+ AGGCAAAATTATGTAAGCTAACAATAATTAACAGGTAATACCATAATAATATATATTAAA
____________________________________________________________
consensus AGGCAAAATTATGTAAGCTAACAATAATTAACAGGTAATACCATAATAATATATATTAAA
. : . : . : . : . : . :
JMSF009P24+ CCCAAGAATATATTAAGAATCCAACCGAGCGCGAGAAACGAGGGTGTCGGAGAGGCAAAT
JMFS081A04+ CGAGCGCGAGAAACGAGGGTGTCGGAGAGGCAAAT
____________________________________________________________
consensus CCCAAGAATATATTAAGAATCCAACCGAGCGCGAGAAACGAGGGTGTCGGAGAGGCAAAT
. : . : . : . : . : . :
JMSF009P24+ ATGCGAATCT
JMFS081A04+ ATGCGAATCTTGAAAGTGGAATTTGGCAATCTGTCTGTGGTATTGTACAGGAAAGAAGGC
____________________________________________________________
consensus ATGCGAATCTTGAAAGTGGAATTTGGCAATCTGTCTGTGGTATTGTACAGGAAAGAAGGC
. : . : . : . : . : . :
JMFS081A04+ ACGCGCGGAGCGCGTATGAGTTCGTTTGTAACTAACAGGAAGACGGAAGACCGGGAACTC
____________________________________________________________
consensus ACGCGCGGAGCGCGTATGAGTTCGTTTGTAACTAACAGGAAGACGGAAGACCGGGAACTC
. : . : . : . : . : . :
JMFS081A04+ GGGAAGTTACTAGAATTGTAGAAAATAGGAATACGGTGTCGTATAATATAACGCAAAATA
____________________________________________________________
consensus GGGAAGTTACTAGAATTGTAGAAAATAGGAATACGGTGTCGTATAATATAACGCAAAATA
. : . : . : . : . : . :
JMFS081A04+ TAAGCCGAACTTTTTCAAAAAGAGATTATGCCAGCTACCCTTCGTTGTCTATTGCAATTT
____________________________________________________________
consensus TAAGCCGAACTTTTTCAAAAAGAGATTATGCCAGCTACCCTTCGTTGTCTATTGCAATTT
. : . : . : . : . : . :
JMFS081A04+ CTCTGTAAAAGTCTCTTAATTAATTTTTTATTTGATTTAGTTCCTTAACTACAGGAAAAG
____________________________________________________________
consensus CTCTGTAAAAGTCTCTTAATTAATTTTTTATTTGATTTAGTTCCTTAACTACAGGAAAAG
. : . : . : . : . : . :
JMFS081A04+ TTACCTAAAATAATTCCGTTAGATTTTAGATTAAAACTTCGTTTGAGACAGGATATTCTG
JMFS062G02+ ACTTCGTTTGAGACAGGATATTCTG
____________________________________________________________
consensus TTACCTAAAATAATTCCGTTAGATTTTAGATTAAAACTTCGTTTGAGACAGGATATTCTG
. : . : . : . : . : . :
JMFS081A04+ AGAATTCTGAATCAGTCTTGAGAACGCTGAATTGCCGAGTAAATCACCCAGGCCTTCAAA
JMFS062G02+ AGAATTCTGAATCAGTCTTGAGAACGCTGAATTGCCGAGTAAATCACCCAGGCCTTCAAA
____________________________________________________________
consensus AGAATTCTGAATCAGTCTTGAGAACGCTGAATTGCCGAGTAAATCACCCAGGCCTTCAAA
. : . : . : . : . : . :
JMFS081A04+ TAAACTTCATGTTTCAACGGAAAACTCAGTCTCGACAACAACGCCATCGTCAAGCCATAG
JMFS062G02+ TAAACTTCATGTTTCAACGGAAAACTCAGTCTCGACAACAACGCCATCGTCAAGCCATAG
____________________________________________________________
consensus TAAACTTCATGTTTCAACGGAAAACTCAGTCTCGACAACAACGCCATCGTCAAGCCATAG
. : . : . : . : . : . :
JMFS081A04+ GAGCTTCATTCCCTGAAGAAATCACCCGCCGAGAGCA
JMFS062G02+ GAGCTTCATTCCCTGAAGAAATCACCCGCCGAGAGCATGAATCTGCAAAATTTTGAGAAT
____________________________________________________________
consensus GAGCTTCATTCCCTGAAGAAATCACCCGCCGAGAGCATGAATCTGCAAAATTTTGAGAAT
. : . : . : . : . : . :
JMFS062G02+ CAAACACTCTACACTACTCACCAGATCCTCGATACGTGGAATTGCTCGTCAATATCAATC
____________________________________________________________
consensus CAAACACTCTACACTACTCACCAGATCCTCGATACGTGGAATTGCTCGTCAATATCAATC
. : . : . : . : . : . :
JMFS062G02+ CTAACCCGAATTGCGGAGAGAACTGAATCCAAATCCTTCGGAAACGCGGCAAGCGCTTGC
JMSF007I14+ CCGAATTGCGGAGAGAACTGAATCCAAATCCTTCGGAAACGCGGCAAGCGCTTGC
rJMSF019C06+ CCGAATCGCGGAGAGAATCGAATCAAAATCCTTCGGAAACGCCGTAAGCGATTGC
____________________________________________________________
consensus CTAACCCGAATTGCGGAGAGAACTGAATCCAAATCCTTCGGAAACGCGGCAAGCGCTTGC
. : . : . : . : . : . :
JMFS062G02+ TGGATACTGGAGAAAACCTGGAATCTGTTAACCGAAATTGAAAACCTCCACCTGTTAATG
JMSF007I14+ TGGATACTGGAGAAAACCTGGAATCTGTTAACCGAAATTGAAAACCTCCACCTGTTAATG
rJMSF019C06+ TGGATCCTGGAGAAAACCTGGAATCTGTTAACCGAAATCGAAAACCTCCACCTGTTAATG
____________________________________________________________
consensus TGGATACTGGAGAAAACCTGGAATCTGTTAACCGAAATTGAAAACCTCCACCTGTTAATG
. : . : . : . : . : . :
JMFS062G02+ AATCCCGAGGACTTCCTCCGGCTAAAGCACCAGCTATCGATCAAAGTAACCGCTTAATCG
JMSF007I14+ AATTCCGAGGACTTCCTCCGGCTAAAGCACCAGCTATCGATCAAAGTAACCGCTTAATCG
rJMSF019C06+ GATCCCGACGACTTCCTCCGGCTAAAGCACCAGCTATCGATCAAAGTAACCGCCGAATCG
____________________________________________________________
consensus AATCCCGAGGACTTCCTCCGGCTAAAGCACCAGCTATCGATCAAAGTAACCGCTTAATCG
. : . : . : . : . : . :
JMFS062G02+ CCACCGTTCTGCTTCCGATCGAGATGACTGGTGGAAATCACGAAGCTCTCCAAGGATCTG
JMSF007I14+ CCACCGTTCTGCTTCCGATCGAGATGACTGGTGGAAATCACGAAGCTCTCCAAGGATCTG
rJMSF019C06+ CAACCGTTCTGCTTCCGATCGAGAGGACTGGTGGAAATCACGAAGCTCTCCAAGGATNTG
____________________________________________________________
consensus CCACCGTTCTGCTTCCGATCGAGATGACTGGTGGAAATCACGAAGCTCTCCAAGGATCTG
. : . : . : . : . : . :
JMFS062G02+ AGGCAGAACGTCCCCGGTGTTCTTAGCGTCCAAGTTGATCCCAACGGCGAGCCGAGGGTT
JMSF007I14+ AGGCAGAACGTCCCCGGTGTTCTTAGCGTCCAAGTTGATCCCAACGGCGAGCCGAGGGTT
rJMSF019C06+ AGGCAGAAAGTCCCCGGTATTCTGGACGTCGAAGTCGATCCCAACGGCGGCCCAAGGGTT
____________________________________________________________
consensus AGGCAGAACGTCCCCGGTGTTCTTAGCGTCCAAGTTGATCCCAACGGCGAGCCGAGGGTT
. : . : . : . : . : . :
JMFS062G02+ CAGGAGGCCGCGATGAAGATGTACGCGTAGAAGGACAGTTTCGAGAGG
JMSF007I14+ CAGGAGGCCGCGATGAAGATGTACGCGTAGAAGGACAGTTTCGAGAGG
rJMSF019C06+ CAGGAGGCGGCGATGAAGCTGTACGCGGAGAAGGACGGTTTCGAGAGGATCCATTTGGTT
____________________________________________________________
consensus CAGGAGGCCGCGATGAAGATGTACGCGTAGAAGGACAGTTTCGAGAGGATCCATTTGGTT
. : . : . : . : . : . :
rJMSF019C06+ CAAGGCTTGCAGGCAATTGAAATGGGCGTGAAGAGATTTTACTATTCGTATAAGCAGCTT
____________________________________________________________
consensus CAAGGCTTGCAGGCAATTGAAATGGGCGTGAAGAGATTTTACTATTCGTATAAGCAGCTT
. : . : . : . : . : . :
rJMSF019C06+ TTGACGGTGGTTATGGGGAGCTTGGAAGCCGGAGATTCCGACGATTCGTTGGCTCAGGTG
____________________________________________________________
consensus TTGACGGTGGTTATGGGGAGCTTGGAAGCCGGAGATTCCGACGATTCGTTGGCTCAGGTG
. : . : . : . : . : . :
rJMSF019C06+ TTCCTTGAGCCGACATATTTTCCGAGCTTGGATGCGGCGAAGACGTTCTTGGCGGTGCAC
____________________________________________________________
consensus TTCCTTGAGCCGACATATTTTCCGAGCTTGGATGCGGCGAAGACGTTCTTGGCGGTGCAC
. : . : . : . : . : . :
rJMSF019C06+ CGGAGCCACGAACATGGCCGCCGGTTTAGTCCGTAATTACGGAACCAAAATTGGAGGATA
____________________________________________________________
consensus CGGAGCCACGAACATGGCCGCCGGTTTAGTCCGTAATTACGGAACCAAAATTGGAGGATA
. : . : . : . : . : . :
rJMSF019C06+ GTACAAACTATATGCGAAAACTTATGCAATTTCATTTTTTTTTAATTTATTTTATAAAAT
____________________________________________________________
consensus GTACAAACTATATGCGAAAACTTATGCAATTTCATTTTTTTTTAATTTATTTTATAAAAT