Contig 007086:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF025C20Sequence498008012 (4)ref|XP_009588391.1|1e-46PREDICTED: lysine--tRNA ligase-like [Nicotiana tomentosiformis]724007086 (4)ref|XP_004241405.1|3e-99PREDICTED: lysine--tRNA ligase [Solanum lycopersicum]
JMFF027F17Sequence502008012 (4)ref|XP_009588391.1|3e-47PREDICTED: lysine--tRNA ligase-like [Nicotiana tomentosiformis]812007086 (4)ref|XP_004241405.1|2e-115PREDICTED: lysine--tRNA ligase [Solanum lycopersicum]
JMSF018G17Sequence438008012 (4)ref|XP_009588391.1|4e-37PREDICTED: lysine--tRNA ligase-like [Nicotiana tomentosiformis]755007086 (4)emb|CAC12821.1|4e-94lysyl-tRNA synthetase [Nicotiana tabacum]
JMSF041D10Sequence763008012 (4)ref|XP_006347288.1|3e-106PREDICTED: lysine--tRNA ligase-like [Solanum tuberosum]633007086 (4)ref|XP_004241405.1|3e-101PREDICTED: lysine--tRNA ligase [Solanum lycopersicum]

Alignment

This contig is upended


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rJMFF027F17+                                   TCTTGCAAGTGATGAAGCTAACAAATATCTGGCAG
                      ____________________________________________________________
consensus                                      TCTTGCAAGTGATGAAGCTAACAAATATCTGGCAG
 
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rJMFF025C20+                                                        AACAAGATTACTTG
rJMSF041D10+                                                        AACAAGATTACTTG
rJMFF027F17+          ATGCATGTGCAAAGTTTGAGATAAGATGTGCTCCCCNTCATACTACAACAAGATTACTTG
                      ____________________________________________________________
consensus             ATGCATGTGCAAAGTTTGAGATAAGATGTGCTCCCCNTCATACTACAACAAGATTACTTG
 
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rJMFF025C20+          ACAAACTTGTTGGACACTTTCTTGAAGAGACATGTGTAAATCCGTCTTTTATCATCAACC
rJMSF041D10+          ACAAACTTGTTGGACACTTTCTTGAAGAGACATGTGTAAATCCGTCTTTTATCATCAACC
rJMFF027F17+          ACAAACTTGTTGGACACTTTCTTGAAGAGACATGTGTAAATCCGTCTTTTGTCATCAACC
rJMSF018G17+                                   AGAGACATGTGTAAATCCGTCTTTTATCATCAACC
                      ____________________________________________________________
consensus             ACAAACTTGTTGGACACTTTCTTGAAGAGACATGTGTAAATCCGTCTTTTATCATCAACC
 
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rJMFF025C20+          ATCCAGAGATCATGAGTCCACTTGCGAAATGGCATCGGTCAAAGCCTGGATTGACTGAAC
rJMSF041D10+          ATCCAGAGATCATGAGTCCACTTGCGAAATGGCATCGGTCAAAGCCTGGATTGACTGAAC
rJMFF027F17+          ATCCAGAGATCATGAGTCCACTTGCGAAATGGCATCGGTCAAAGCCTGGATTGACTGAAC
rJMSF018G17+          ATCCAGAGATCATGAGTCCACTTGCGAAATGGCATCGGTCAAAGCCTGGATTGACTGAAC
                      ____________________________________________________________
consensus             ATCCAGAGATCATGAGTCCACTTGCGAAATGGCATCGGTCAAAGCCTGGATTGACTGAAC
 
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rJMFF025C20+          GCTTTGAGCTGTTTATCAACAAACATGAACTTTGCAATGCATACACTGAGTTGAATGATC
rJMSF041D10+          GCTTTGAGCTGTTTATCAACAAACATGAACTTTGCAATGCATACACTGAGTTGAATGATC
rJMFF027F17+          GCTTTGAGCTGTTTATCAACAAACATGAACTTTGCAATGCATACACTGAGTTGAATGATC
rJMSF018G17+          GCTTTGAGCTGTTTATCAACAAACATGAACTTTGCAATGCATACACTGAGTTGAATGATC
                      ____________________________________________________________
consensus             GCTTTGAGCTGTTTATCAACAAACATGAACTTTGCAATGCATACACTGAGTTGAATGATC
 
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rJMFF025C20+          CTGTTGTTCAACGGCAGCGTTTTGCTGATCAGCTCAAGGATCGTCAATCTGGTGATGATG
rJMSF041D10+          CTGTTGTTCAACGGCAGCGTTTTGCTGATCAGCTCAAGGATCGTCAATCTGGTGATGATG
rJMFF027F17+          CTGTTGTTCAACGGCAGCGTTTTGCTGATCAGCTCAAGGATCGTCAATCTGGTGATGATG
rJMSF018G17+          CTGTTGTTCAACGGCAGCGTTTTGCTGATCAGCTCAAGGATCGTCAATCTGGTGATGATG
                      ____________________________________________________________
consensus             CTGTTGTTCAACGGCAGCGTTTTGCTGATCAGCTCAAGGATCGTCAATCTGGTGATGATG
 
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rJMFF025C20+          AAGCAATGGCTTTGGATGAAAATTTCTGCACAGCTCTTGAATATGGATTGCCTCCAACAG
rJMSF041D10+          AAGCAATGGCTTTGGATGAAAATTTCTGCACAGCTCTTGAATATGGATTGCCTCCAACAG
rJMFF027F17+          AAGCAATGGCTTTGGATGAAAATTTCTGCACAGCTCTTGAATATGGATTGCCTCCAACAG
rJMSF018G17+          AAGCAATGGCTTTGGATGAAAATTTCTGCACAGCTCTTGAATATGGATTGCCTCCAACAG
                      ____________________________________________________________
consensus             AAGCAATGGCTTTGGATGAAAATTTCTGCACAGCTCTTGAATATGGATTGCCTCCAACAG
 
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rJMFF025C20+          GTGGATGGGGATTGGGTATTGATCGATTGGCTATGCTGTTGACTGATTCACAAAATATCA
rJMSF041D10+          GTGGATGGGGATTGGGTATTGATCGATTGGCTATGCTGTTGACTGATTCACAAAATATCA
rJMFF027F17+          GTGGATGGGGATTGGGTATTGATCGATTGGCTATGCTGTTGACTGATTCACAAAATATCA
rJMSF018G17+          GTGGATGGGGATTGGGTATTGATCGATTGGCTATGCTGTTGACTGATTCACAAAATATCA
                      ____________________________________________________________
consensus             GTGGATGGGGATTGGGTATTGATCGATTGGCTATGCTGTTGACTGATTCACAAAATATCA
 
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rJMFF025C20+          AGGAAGTTCTACTCTTCCCTGCTATGAAGCCACAGGAAGAAGCTTCTGCGAAAGAAAGCC
rJMSF041D10+          AGGAAGTTCTACTCTTCCCTGCTATGAAGCCACAGGAAGAAGCTTCTGCGAAAGAAAGCC
rJMFF027F17+          AGGAAGTTCTACTCTTCCCTGCTATGAAGCCACAGGAAGAAGCTTCTGCGAAAGAAAGCC
rJMSF018G17+          AGGAAGTTCTACTCTTCCCTGCTATGAAGCCACAGGAAGAAGCTTCTGCGAAAGAAAGCC
                      ____________________________________________________________
consensus             AGGAAGTTCTACTCTTCCCTGCTATGAAGCCACAGGAAGAAGCTTCTGCGAAAGAAAGCC
 
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rJMFF025C20+          AAAACAAGCCAGGTGAACCCGCCAAGGCTAAGGATGATGCACAAACCAAACCAAAGGATG
rJMSF041D10+          AAAACAAGCCAGGTGAACCCGCCAAGGCTAAGGATGATGCACAAACCAAACCAAAGGATG
rJMFF027F17+          AAAACAAGCCAGGTGAACCCGCCAAGGCTAAGGATGATGCACAAACCAAACCAAAGGATG
rJMSF018G17+          AAAACAAGCCAGGTGAACCCGCCAAGGCTAAGGATGATGCACAAACCAAACCAAAGGATG
                      ____________________________________________________________
consensus             AAAACAAGCCAGGTGAACCCGCCAAGGCTAAGGATGATGCACAAACCAAACCAAAGGATG
 
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rJMFF025C20+          GCGGTGCAACTCAAGCAGCGTGATACCTGGTGTTGAGCTGAATGTCATTTTGCTTTTCTG
rJMSF041D10+          GCGGTGCAACTCAAGCAGCGTGATACCTGGTGTTGAGCTGAATGTCATTTTGCTTTTCTG
rJMFF027F17+          GCGGTGCAACTCAAGCAGCGTGATACCTGGTGTTGAGCTGAATGTCATTTTGCTTTTCTG
rJMSF018G17+          GCGGTGCAACTCAAGCAGCGTGATACCTGGTGTTGAGCTGAATGTCATTTTGCTTTTCTG
                      ____________________________________________________________
consensus             GCGGTGCAACTCAAGCAGCGTGATACCTGGTGTTGAGCTGAATGTCATTTTGCTTTTCTG
 
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rJMFF025C20+          AATGCTCAACTGAAATGGAAGAATTTGAGTCACATATGGGGATGATTATTACAAATTTTT
rJMSF041D10+          AATGCTCAACTGAAATGGAAGAATTTGAGTCACGTATGGGGATGATTATTACAAATTTTT
rJMFF027F17+          AATGCTCAACTGAAATGGAAGAATTTGAGTCACATATGGGGATGATTATTACAAATTTTT
rJMSF018G17+          AATGCTCAACTGAAATGGAAGAATTTGAGTCACATATGGGGATGATTATTACAAATTTTT
                      ____________________________________________________________
consensus             AATGCTCAACTGAAATGGAAGAATTTGAGTCACATATGGGGATGATTATTACAAATTTTT
 
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rJMFF025C20+          TTGGTGTAGTTTACTCTGTATTTTTTAGAATCTATTTTTAATGACTATTGTTCTATGCAC
rJMSF041D10+          TTGGTGTAGTT                                                 
rJMFF027F17+          TTGGTGTAGTTTACTCTGTATTTTTTAGAATCTATTTTTAATGACTATTGTTCTATGCAC
rJMSF018G17+          TTGGTGTAGTTTACTCTGTATTTTTTAGAATCTATTTTTAATGACTATTGTTCTATGCAC
                      ____________________________________________________________
consensus             TTGGTGTAGTTTACTCTGTATTTTTTAGAATCTATTTTTAATGACTATTGTTCTATGCAC
 
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rJMFF025C20+          CATCAAAGCTTATATGTTATCAGCACTTATCTGAGTAATATTATGAAATT          
rJMFF027F17+          CATCAAAGCTTATATGTTATCAGCACTTATCTGAGTAATATTATGAAATT          
rJMSF018G17+          CATCAAAGCTTATATGTTATCAGCACTTATCTGAGTAATATTATGAAATTTCATATCACT
                      ____________________________________________________________
consensus             CATCAAAGCTTATATGTTATCAGCACTTATCTGAGTAATATTATGAAATTTCATATCACT
 
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rJMSF018G17+          AGCCATTTCTATTGTATATCACCGGCTTAGTACTCCATTTGGTATCTTAACCAATCACAT
                      ____________________________________________________________
consensus             AGCCATTTCTATTGTATATCACCGGCTTAGTACTCCATTTGGTATCTTAACCAATCACAT