clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMSF014M06 | Sequence | 471 | 002187 (4) | ref|XP_009804329.1| | 1e-50 | PREDICTED: low affinity sulfate transporter 3-like [Nicotiana sylvestris] | 723 | 007082 (3) | ref|XP_011098127.1| | 7e-84 | PREDICTED: low affinity sulfate transporter 3 [Sesamum indicum] |
JMSF017N03 | Sequence | 526 | 002187 (4) | ref|XP_009804329.1| | 1e-56 | PREDICTED: low affinity sulfate transporter 3-like [Nicotiana sylvestris] | 770 | 007082 (3) | ref|XP_011098127.1| | 2e-85 | PREDICTED: low affinity sulfate transporter 3 [Sesamum indicum] |
JMSF027O03 | Sequence | 673 | 002187 (4) | ref|XP_009593440.1| | 2e-85 | PREDICTED: low affinity sulfate transporter 3-like [Nicotiana tomentosiformis] | 739 | 007082 (3) | ref|XP_011098127.1| | 2e-79 | PREDICTED: low affinity sulfate transporter 3 [Sesamum indicum] |
This contig is upended
. : . : . : . : . : . :
rJMSF027O03+ AGATGGACTTCCTTGTCTGC
rJMSF014M06+ TCTGGAAGGTGGACAAGATGGACTTCCTTGTCTGC
rJMSF017N03+ GGGGCGCTTTCCATATCTGGAAGGTGGACAAGATGGACTTCCTTGTCTGC
____________________________________________________________
consensus GGGGCGCTTTCCATATCTGGAAGGTGGACAAGATGGACTTCCTTGTCTGC
. : . : . : . : . : . :
rJMSF027O03+ ACTGGTGCCTTTCTTGGAGTGCTGTTTGGATCAGTGGAAATTGGCCTTGTTGTCGCGGTT
rJMSF014M06+ ACTGGTGCCTTTCTTGGAGTGCTGTTTGGATCAGTGGAAATTGGCCTTGTTGTCGCGGTT
rJMSF017N03+ ACTGGTGCCTTTCTTGGAGTGCTGTTTGGATCAGTGGAAATTGGCCTTGTTGTCGCGGTT
____________________________________________________________
consensus ACTGGTGCCTTTCTTGGAGTGCTGTTTGGATCAGTGGAAATTGGCCTTGTTGTCGCGGTT
. : . : . : . : . : . :
rJMSF027O03+ GGGATTTCATTTGTTAAGGTTGTTGTGGATGTGATTAGACCTAGTACAGAAGTACTAGGA
rJMSF014M06+ GGGATTTCATTTGTTAAGGTTGTTGTGGATGTGATTAGACCTAGTACAGAAGTACTAGGA
rJMSF017N03+ GGGATTTCATTTGTTAAGGTTGTTGTGGATGTGATTAGACCTAGTACAGAAGTACTAGGA
____________________________________________________________
consensus GGGATTTCATTTGTTAAGGTTGTTGTGGATGTGATTAGACCTAGTACAGAAGTACTAGGA
. : . : . : . : . : . :
rJMSF027O03+ AGGCTTCCTGGAACAGAAATCTTTTGTGAGAGAGCTCAGTTTCCAGCTGCAACTACCATT
rJMSF014M06+ AGGCTTCCTGGAACAGAAATCTTTTGTGAGAGAGCTCAGTTTCCAGCTGCAACTACCATT
rJMSF017N03+ AGGCTTCCTGGAACAGAAATCTTTTGTGAGAGAGCTCAGTTTCCAGCTGCAACTACCATT
____________________________________________________________
consensus AGGCTTCCTGGAACAGAAATCTTTTGTGAGAGAGCTCAGTTTCCAGCTGCAACTACCATT
. : . : . : . : . : . :
rJMSF027O03+ CCTGGGATCTTGATTGTCAGAATCAATTCCGGGTCTATTTGTTTTGCCAATGCTAACTTC
rJMSF014M06+ CCTGGGATCTTGATTGTCAGAATCAATTCCGGGTCTATTTGTTTTGCCAATGCTAACTTC
rJMSF017N03+ CCTGGGATCTTGATTGTCAGAATCAATTCCGGGTCTATTTGTTTTGCCAATGCTAACTTC
____________________________________________________________
consensus CCTGGGATCTTGATTGTCAGAATCAATTCCGGGTCTATTTGTTTTGCCAATGCTAACTTC
. : . : . : . : . : . :
rJMSF027O03+ ATTGTAGAAAAGACCCTAAGATGGGTAGCAGAAGCTAATGACACTGAAAAAAACAGCTTG
rJMSF014M06+ ATTGTAGAAAAGACCCTAAGATGGGTAGCAGAAGCTAATGACACTGAAAAAAACAGCTTG
rJMSF017N03+ ATTGTAGAAAAGACCCTAAGATGGGTAGCAGAAGCTAATGACACTGAAAAAAACAGCTTG
____________________________________________________________
consensus ATTGTAGAAAAGACCCTAAGATGGGTAGCAGAAGCTAATGACACTGAAAAAAACAGCTTG
. : . : . : . : . : . :
rJMSF027O03+ GATAGTGTTCGTGTTGTGGTCTTGGACATGTCCAATGTGACCAACATTGACACCTCGGGA
rJMSF014M06+ GATAGTGTTCGTGTTGTGGTCTTGGACATGTCCAATGTGACCAACATTGACACCTCGGGA
rJMSF017N03+ GATAGTGTTCGTGTTGTGGTCTTGGACATGTCCAATGTGACCAACATTGACACCTCGGGA
____________________________________________________________
consensus GATAGTGTTCGTGTTGTGGTCTTGGACATGTCCAATGTGACCAACATTGACACCTCGGGA
. : . : . : . : . : . :
rJMSF027O03+ ATCATAGCCTTGGAAGAGCTGCATAAGAATTTTGTTTCGCAAGGGATCCAGTTAGTAGTG
rJMSF014M06+ ATCATAGCCTTGGAAGAGCTGCATAAGAATTTTGTTTCGCAAGGGATCCAGTTAGTAGTG
rJMSF017N03+ ATCATAGCCTTGGAAGAGCTGCATAAGAATTTTGTTTCGCAAGGGATCCAGTTAGTAGTG
____________________________________________________________
consensus ATCATAGCCTTGGAAGAGCTGCATAAGAATTTTGTTTCGCAAGGGATCCAGTTAGTAGTG
. : . : . : . : . : . :
rJMSF027O03+ GCGAATCCAAGATGGAAGGTGATAGAGAAACTGAAGGCGGCGGAATTTGTGAATAAAGTT
rJMSF014M06+ GCGAATCCAAGATGGAAGGTGATAGAGAAACTGAAGGCGGCGGAATTTGTGAATAAAGTT
rJMSF017N03+ GCGAATCCAAGATGGAAGGTGATAGAGAAACTGAAGGCGGCGGAATTTGTGAATAAAGTT
____________________________________________________________
consensus GCGAATCCAAGATGGAAGGTGATAGAGAAACTGAAGGCGGCGGAATTTGTGAATAAAGTT
. : . : . : . : . : . :
rJMSF027O03+ GGAGGAGGGTGGATTTTCCTGACGGTGGCGGATGCGGTGGAGGCTTGCCTTCATCTCAAA
rJMSF014M06+ GGAGGAGGGTGGATTTTCCTGACGGTGGCGGATGCGGTGGAGGCTTGCCTTCATCTCAAA
rJMSF017N03+ GGAGGAGGGTGGATTTTCCTGACGGTGGCGGATGCGGTGGAGGCTTGCCTTCATCTCAAA
____________________________________________________________
consensus GGAGGAGGGTGGATTTTCCTGACGGTGGCGGATGCGGTGGAGGCTTGCCTTCATCTCAAA
. : . : . : . : . : . :
rJMSF027O03+ ATGCTTGCTTTCACCACTCGTTGATATATAGATATCATGCCTGCATGCCACTATATTATA
rJMSF014M06+ ATGCTTGCTTTCACCACTCGTTGATATATAGATATCATGCCTGCATGCCACTATATTATA
rJMSF017N03+ ATGCTTGCTTTCACCACTCGTTGATATATAGATATCATGCCTGCATGCCACTATATTATA
____________________________________________________________
consensus ATGCTTGCTTTCACCACTCGTTGATATATAGATATCATGCCTGCATGCCACTATATTATA
. : . : . : . : . : . :
rJMSF027O03+ TTGATGTTGGTTTTACTATTATGTCCGGATTTTGCAGTAATTTATCTAAGTATATAGTTT
rJMSF014M06+ TTGATGTTGGTTTTACTATTATGTCCGGATTTTGCAGTAATTTATCTAAGTATATAGTTT
rJMSF017N03+ TTGATGTTGGTTTTACTATTATGTCCGGATTTTGCAGTAATTTATCTAAGTATATAGTTT
____________________________________________________________
consensus TTGATGTTGGTTTTACTATTATGTCCGGATTTTGCAGTAATTTATCTAAGTATATAGTTT
. : . : . : . : . : . :
rJMSF027O03+ TTTAATCTGTTGCACTTAATTATATGATTGCCAATAAATGTAACCATGCATTGTGAGAT
rJMSF014M06+ TTTAATCTGTTGCACTTAATTATATGAT
rJMSF017N03+ TTTAATCTGTTGCACTTAATTATATGATTGCCAATAAATGTAACCATGCATTGTGAGATT
____________________________________________________________
consensus TTTAATCTGTTGCACTTAATTATATGATTGCCAATAAATGTAACCATGCATTGTGAGATT