| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF018N10 | Sequence | 553 | 013316 (14) | emb|CDP13279.1| | 2e-61 | unnamed protein product [Coffea canephora] | 700 | 007080 (3) | ref|XP_009768592.1| | 7e-24 | PREDICTED: GDSL esterase/lipase At3g48460-like isoform X3 [Nicotiana sylvestris |
| JMSF017D08 | Sequence | 522 | 013316 (14) | emb|CDP13279.1| | 5e-36 | unnamed protein product [Coffea canephora] | 749 | 007080 (3) | ref|XP_009768592.1| | 6e-36 | PREDICTED: GDSL esterase/lipase At3g48460-like isoform X3 [Nicotiana sylvestris |
| JMSF046N24 | Sequence | 732 | 013316 (14) | emb|CDP13279.1| | 3e-102 | unnamed protein product [Coffea canephora] | 602 | 007080 (3) | gb|KJB31036.1| | 9e-20 | hypothetical protein B456_005G173500, partial [Gossypium raimondii] |
This contig is upended
. : . : . : . : . : . :
rJMSF017D08+ CTGTGTGAGCCACTTCTGAGCAATAGATGT
____________________________________________________________
consensus CTGTGTGAGCCACTTCTGAGCAATAGATGT
. : . : . : . : . : . :
rJMFF018N10+ CTGAACATTATAGTAGTCACTGATGCCGATTGGACCGACCCAGAAAGAGTGCATTCT
rJMSF017D08+ ACCCTGAACATTATAGTAGTCACTGATGCCGATTGGACCGACCCAG-AAGAGTGCATTCT
____________________________________________________________
consensus ACCCTGAACATTATAGTAGTCACTGATGCCGATTGGACCGACCCAGAAAGAGTGCATTCT
. : . : . : . : . : . :
rJMFF018N10+ TGAACTCTTCTATGCAACGGTGGGCGTGTTTACCCATGCAATTCTTTTCTCTGAGGAAAT
rJMSF046N24+ TGAGGAAAT
rJMSF017D08+ TGAACTCTTCTATGCAACGGTGGGCGTGTTTACCCATGCAATTCTTTTCTCTGAGGAAAT
____________________________________________________________
consensus TGAACTCTTCTATGCAACGGTGGGCGTGTTTACCCATGCAATTCTTTTCTCTGAGGAAAT
. : . : . : . : . : . :
rJMFF018N10+ TTCTGAACCAGTGTACCTGTGTCTGAATGGTCATAGGTATGCCTTTCCAGATTACGTGTG
rJMSF046N24+ TTCTGAACCAGTGTACCTGTGTCTGAATGGTCATAGGTATGCCTTTCCAGATTACGTGTG
rJMSF017D08+ TTCTGAACCAGTGTACCTGTGTCTGAATGGTCATAGGTATGCCTTTCCAGATTACGTGTG
____________________________________________________________
consensus TTCTGAACCAGTGTACCTGTGTCTGAATGGTCATAGGTATGCCTTTCCAGATTACGTGTG
. : . : . : . : . : . :
rJMFF018N10+ AGAGGTCTTGATTTGTGAAGTATTTGTGCTGGAGAGACGAGGATCCGGCGATTGCAAAGT
rJMSF046N24+ AGAGGTCTTGATTTGTGAAGTATTTGTGCTGGAGAGACGAGGATCCGGCGATTGCAAAGT
rJMSF017D08+ AGAGGTCTTGATTTGTGAAGTATTTGTGCTGGAGAGACGAGGATCCGGCGATTGCAAAGT
____________________________________________________________
consensus AGAGGTCTTGATTTGTGAAGTATTTGTGCTGGAGAGACGAGGATCCGGCGATTGCAAAGT
. : . : . : . : . : . :
rJMFF018N10+ TGACACCGGATGTGGCTGTGGATAAGGCCCCGGGGGTGGCGGAGTAGCTGTTTTTGGAAA
rJMSF046N24+ TGACACCGGATGTGGCTGTGGATAAGGCCCCGGGGGTGGCGGAGTAGCTGTTTTTGGAAA
rJMSF017D08+ TGACACCGGATGTGGCTGTGGATAAGGCCCCGGGGGTGGCGGAGTAGCTGTTTTTGGAAA
____________________________________________________________
consensus TGACACCGGATGTGGCTGTGGATAAGGCCCCGGGGGTGGCGGAGTAGCTGTTTTTGGAAA
. : . : . : . : . : . :
rJMFF018N10+ TGTTTAGCCAAGGCTGTGGGGATGGCAAAGAGAAGGATGCAGACACATAGTCCACCGCCA
rJMSF046N24+ TGTTTAGCCAAGGCTGTGGGGATGGCAAAGAGAAGGATGCAGACACATAGTCCACCGCCA
rJMSF017D08+ TGTTTAGCCAAGGCTGTGGGGATGGCAAAGAGAAGGATGCAGACACATAGTCCACCGCCA
____________________________________________________________
consensus TGTTTAGCCAAGGCTGTGGGGATGGCAAAGAGAAGGATGCAGACACATAGTCCACCGCCA
. : . : . : . : . : . :
rJMFF018N10+ ATTTACCGTTGGATAATCGGCCTCCAGAGCGCTGGCAGTTAGCACCAAAGCTTCCTTTAA
rJMSF046N24+ ATTTACCGTTGGATAATCGGCCTCCAGAGCGCTGGCAGTTAGCACCAAAGCTTCCTTTAA
rJMSF017D08+ ATTTACCGTTGGATAATCGGCCTCCAGAGCGCTGGCAGTTAGCACCAAAGCTTCCTTTAA
____________________________________________________________
consensus ATTTACCGTTGGATAATCGGCCTCCAGAGCGCTGGCAGTTAGCACCAAAGCTTCCTTTAA
. : . : . : . : . : . :
rJMFF018N10+ GGCTTGTCATTGTGCAAGCATTTCCGGTGTCTGTGTATGAGCCCCCGAAGGCATACACCG
rJMSF046N24+ GGCTTGTCATTGTGCAAGCATTTCCGGTGTCTGTGTATGAGCCCCCGAAGGCATACACCG
rJMSF017D08+ GGCTTGTCATTGTGCAAGCATTTCCGGTGTCTGTGTATGAGCCCCCGAAGGCATACACCG
____________________________________________________________
consensus GGCTTGTCATTGTGCAAGCATTTCCGGTGTCTGTGTATGAGCCCCCGAAGGCATACACCG
. : . : . : . : . : . :
rJMFF018N10+ CGGAGAAGGTGCTGCCATGTTTCCCCTGCAAACTCCCGCTTTCTTGGGCATAGACAACAC
rJMSF046N24+ CGGAGAAGGTGCTGCCATGTTTCCCCTGCAAACTCCCGCTTTCTTGGGCATAGACAACAC
rJMSF017D08+ CGGAGAAGGTGCTGCCATGTTTCCCCTGCAAACTCCCGCTTTCTTGGGCATAGACAACAC
____________________________________________________________
consensus CGGAGAAGGTGCTGCCATGTTTCCCCTGCAAACTCCCGCTTTCTTGGGCATAGACAACAC
. : . : . : . : . : . :
rJMFF018N10+ GAGCATATGTTGAGAAGAAGAACAAGAAGGATGTTATGAAGGAGAGGGTAAGAGAAGAGG
rJMSF046N24+ GAGCATATGTTGAGAAGAAGAACAAGAAGGATGTTATGAAGGAGAGGGTAAGAGAAGAGG
rJMSF017D08+ GAGCATATGTTGAGAAGAAGAACAAGAAGGATGTTATGAAGGAGAGGGTAAGAGAAGAGG
____________________________________________________________
consensus GAGCATATGTTGAGAAGAAGAACAAGAAGGATGTTATGAAGGAGAGGGTAAGAGAAGAGG
. : . : . : . : . : . :
rJMFF018N10+ AAGACATGTTTTGCATGAAATTAAATTTTTTTTTGATGTTTTTGTATTCAAGAAATGCTG
rJMSF046N24+ AAGACATGGTTTGCATGAAATTAAATTTTTTTTTGATGTTTTTGTATTCAAGAAATGCTG
rJMSF017D08+ AAGACATGGTTTGCATGAAATTAAATTTTTTTTTGATGTTTTTGTATTCAAGAAATGCTG
____________________________________________________________
consensus AAGACATGGTTTGCATGAAATTAAATTTTTTTTTGATGTTTTTGTATTCAAGAAATGCTG
. : . : . : . : . : . :
rJMFF018N10+ CACAAATGTTATTTATGCATTATTACCATTGGAGCAC
rJMSF046N24+ CACAAATGTTATTTATGCATTATTACCATTGGAGCAC
rJMSF017D08+ CACAAATGTTATTTATGCATTATTACCATTGGAGCACAGGATTTAGATGAGTGGACACCC
____________________________________________________________
consensus CACAAATGTTATTTATGCATTATTACCATTGGAGCACAGGATTTAGATGAGTGGACACCC