Contig 007073:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF014N08Sequence436005019 (2)ref|XP_009773006.1|2e-28PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27798007073 (2)ref|XP_009794352.1|4e-113PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27
JMSF046K17Sequence740005019 (2)ref|XP_009773006.1|4e-80PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27721007073 (2)ref|XP_009794346.1|1e-78PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27

Alignment

This contig is upended


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rJMSF014N08+                                                   TGGACTACTTCGTATTTGA
                      ____________________________________________________________
consensus                                                      TGGACTACTTCGTATTTGA
 
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rJMSF046K17+                                                             GGGAATATC
rJMSF014N08+          TGAGAGCAGAAANGGAATACNTACATGGCAAACACGTTTTGTAATTGCGACGGGAATATC
                      ____________________________________________________________
consensus             TGAGAGCAGAAANGGAATACNTACATGGCAAACACGTTTTGTAATTGCGACGGGAATATC
 
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rJMSF046K17+          ACGTGGACTCCTTTATCTTCANCAAGACTCCAGATTGAAAATTNTACATAGAGATCNGAA
rJMSF014N08+          ACGTGGACTCCTTTATCTTCACCAAGACTCCAGATTGAAAATTATACATAGAGATCTGAA
                      ____________________________________________________________
consensus             ACGTGGACTCCTTTATCTTCACCAAGACTCCAGATTGAAAATTATACATAGAGATCTGAA
 
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rJMSF046K17+          GACGAGCAACATATTACTGGATGCTGAATTGAACCCCAAGATTTCTGNCTTTGGCCTTGC
rJMSF014N08+          GACGAGCAACATATTACTGGATGCTGAATTGAACCCCAAGATTTCTGACTTTGGCCTTGC
                      ____________________________________________________________
consensus             GACGAGCAACATATTACTGGATGCTGAATTGAACCCCAAGATTTCTGACTTTGGCCTTGC
 
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rJMSF046K17+          TAGAATTGTAGAAGANGATGATGGCCTAGCAAAAACGAAGAGAGTTATAGGGACNTATGG
rJMSF014N08+          TAGAATTGTAGAAGAAGATGATGGCCTAGCAAAAACGAAGAGAGTTATAGGGACATATGG
                      ____________________________________________________________
consensus             TAGAATTGTAGAAGAAGATGATGGCCTAGCAAAAACGAAGAGAGTTATAGGGACATATGG
 
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rJMSF046K17+          TTACATGTCACCCGAGTACGTCGTTGATGGAAACTTCTCTGTAAAATCAGATGTTTTCAN
rJMSF014N08+          TTACATGTCACCCGAGTACGTCGTTGATGGAAACTTCTCTGTAAAATCAGATGTTTTCAG
                      ____________________________________________________________
consensus             TTACATGTCACCCGAGTACGTCGTTGATGGAAACTTCTCTGTAAAATCAGATGTTTTCAG
 
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rJMSF046K17+          CCTTGGAGTGATTTTATTGGAACTCANTAGTGGAAGAAAGAACAGGGCATTTCATGATTC
rJMSF014N08+          CCTTGGAGTGATTTTATTGGAACTCATTAGTGGAAGAAAGAACAGGGCATTTCATGATTC
                      ____________________________________________________________
consensus             CCTTGGAGTGATTTTATTGGAACTCATTAGTGGAAGAAAGAACAGGGCATTTCATGATTC
 
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rJMSF046K17+          AGATCATCACCACAATCTTCTGGGTCATGCATGGCTATTGTGGAATGATGGCANCCCNTT
rJMSF014N08+          AGATCATCACCACAATCTTCTGGGTCATGCATGGCTATTGTGGAATGATGGCAACCCTTT
                      ____________________________________________________________
consensus             AGATCATCACCACAATCTTCTGGGTCATGCATGGCTATTGTGGAATGATGGCAACCCTTT
 
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rJMSF046K17+          CGAACTAATGGATAATTGNGTGAGAGACTCTTATGTGGAATCTCAAGTAGCTNCGATGCA
rJMSF014N08+          AGAACTAATGGATAATTGTGTGAGAGACTCTTATGTGGAATCTCAAGTA-CTACGATGCA
                      ____________________________________________________________
consensus             CGAACTAATGGATAATTGTGTGAGAGACTCTTATGTGGAATCTCAAGTAGCTACGATGCA
 
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rJMSF046K17+          TTCATGTAGCTCTTCTTTGCGTTTCGAAACTACCAGAAGATAGACCAACAATGGCATCAG
rJMSF014N08+          TTCATGTAGCTCTTCTTTGCGTTTCGAAACTACCAGAAGATAGACCAACAATGGCATCAG
                      ____________________________________________________________
consensus             TTCATGTAGCTCTTCTTTGCGTTTCGAAACTACCAGAAGATAGACCAACAATGGCATCAG
 
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rJMSF046K17+          TAGTTTTCATGTTGGNGAACGAGGAAGTAGCTTTACCTAAACCAAAAGAGCCAGGCTTCT
rJMSF014N08+          TAGTTTTCATGTTGGAGAACGAGGAAGTAGCTTTACCTAAACCAAAAGAGCCAGGCTTCT
                      ____________________________________________________________
consensus             TAGTTTTCATGTTGGAGAACGAGGAAGTAGCTTTACCTAAACCAAAAGAGCCAGGCTTCT
 
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rJMSF046K17+          TTGTGGAAAGGAATTCAACCGAAGCATCTTCT                            
rJMSF014N08+          TTGTGGAAAGGAATTCAACCGAAGCATCTTCTACAGATAAGGAAAGATGCTGCTATGAAA
                      ____________________________________________________________
consensus             TTGTGGAAAGGAATTCAACCGAAGCATCTTCTACAGATAAGGAAAGATGCTGCTATGAAA
 
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rJMSF014N08+          TCGCAATGATAACATTCAGCACTCTTGAAGGTAGATGAAAACAACATAATTTCGATTGTA
                      ____________________________________________________________
consensus             TCGCAATGATAACATTCAGCACTCTTGAAGGTAGATGAAAACAACATAATTTCGATTGTA
 
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rJMSF014N08+          TCTCTCTATGTATCACATTGCATCTCCCTCTATTGCTTCTAACTCAATCGTACTCCCACC
                      ____________________________________________________________
consensus             TCTCTCTATGTATCACATTGCATCTCCCTCTATTGCTTCTAACTCAATCGTACTCCCACC