Contig 007067:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF002C12Sequence347006217 (9)ref|XP_009781763.1|73.2PREDICTED: uncharacterized protein LOC104230606 [Nicotiana sylvestris]737007067 (3)ref|XP_006349551.1|375PREDICTED: uncharacterized protein LOC102592127 [Solanum tuberosum]
JMSF013B18Sequence221006217 (9)803007067 (3)ref|XP_009781763.1|322PREDICTED: uncharacterized protein LOC104230606 [Nicotiana sylvestris]
JMSF048B20Sequence709006217 (9)ref|XP_009781763.1|166PREDICTED: uncharacterized protein LOC104230606 [Nicotiana sylvestris]751007067 (3)ref|XP_009781763.1|349PREDICTED: uncharacterized protein LOC104230606 [Nicotiana sylvestris]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF002C12+ GATTATGAAAATGGGAGGCCTGAAGCTACGTATAGTATGGGCATAAGGCA
rJMSF048B20+ GGCATAAGGCA
                      ____________________________________________________________
consensus GATTATGAAAATGGGAGGCCTGAAGCTACGTATAGTATGGGCATAAGGCA
 
. : . : . : . : . : . :
rJMSF002C12+ GAAAGTGGCTGAAGAATTTGGATCGAGCCCTAACAAGAAAGGTGAGCTTGGCAAGCAGCA
rJMSF048B20+ GAAAGTGGCTGAAGAATTTGGATCGAGCCCTAACAAGAAAGGTGAGCNTGGCAAGCAGCA
rJMSF013B18+ AAAGGTGAGCNTGGCAAGCAGCA
                      ____________________________________________________________
consensus GAAAGTGGCTGAAGAATTTGGATCGAGCCCTAACAAGAAAGGTGAGCTTGGCAAGCAGCA
 
. : . : . : . : . : . :
rJMSF002C12+ TGCAAAAGACGTTCTTGTGACCTCATTACGCGCTGGGAATTACCATGAGGAATTGGCTAG
rJMSF048B20+ TGCAAAAGACGTTCTTGTGACCTCATTACGCGCTGGGAATTACCATGAGGAATTGGCTAG
rJMSF013B18+ TGCAAAAGACGTTCTTGTGACCTCATTACGCGCTGGGAATTACCATGAGGAATTGGCTAG
                      ____________________________________________________________
consensus TGCAAAAGACGTTCTTGTGACCTCATTACGCGCTGGGAATTACCATGAGGAATTGGCTAG
 
. : . : . : . : . : . :
rJMSF002C12+ TTCTGTCTTTTGCGGAGTTATGCCTGGCGATGGGTGGAGTGGACGGATGGAAGATAGTAT
rJMSF048B20+ TTCTGTCTTTTGCGGAGTTATGCCTGGCGATGGGTGGAGTGGACGGATGGAAGATAGTAT
rJMSF013B18+ TTCTGTCTTTTGCGGAGTTATGCCTGGCGATGGGTGGAGTGGACGGATGGAAGATAGTAT
                      ____________________________________________________________
consensus TTCTGTCTTTTGCGGAGTTATGCCTGGCGATGGGTGGAGTGGACGGATGGAAGATAGTAT
 
. : . : . : . : . : . :
rJMSF002C12+ TTTGCAAGGGTGCATTCCTGTAGTCATTCAGGATGGTATATACCTGCCGTACGAGAATGT
rJMSF048B20+ TTTGCAAGGGTGCATTCCTGTAGTCATTCAGGATGGTATATACCTGCCGTACGAGAATGT
rJMSF013B18+ TTTGCAAGGGTGCATTCCTGTAGTCATTCAGGATGGTATATACCTGCCGTACGAGAATGT
                      ____________________________________________________________
consensus TTTGCAAGGGTGCATTCCTGTAGTCATTCAGGATGGTATATACCTGCCGTACGAGAATGT
 
. : . : . : . : . : . :
rJMSF002C12+ CCTTAACTATGAAAGCTTTGCCGTTAGGATACGCGAAGATGAAATTCCGAATTTGATGAA
rJMSF048B20+ CCTTAACTATGAAAGCTTTGCCGTTAGGATACGCGAAGATGAAATTCCGAATTTGATGAA
rJMSF013B18+ CCTTAACTATGAAAGCTTTGCCGTTAGGATACGCGAAGATGAAATTCCGAATTTGATGAA
                      ____________________________________________________________
consensus CCTTAACTATGAAAGCTTTGCCGTTAGGATACGCGAAGATGAAATTCCGAATTTGATGAA
 
. : . : . : . : . : . :
rJMSF002C12+ CATTCTCCGGAGTATAAACGAGACAGAAGTCGAATTCAAATTGGCAAACGTAAAGAAACT
rJMSF048B20+ CATTCTCCGGAGTATAAACGAGACAGAAGTCGAATTCAAATTGGCAAACGTAAAGAAACT
rJMSF013B18+ CATTCTCCGGAGTATAAACGAGACAGAAGTCGAATTCAAATTGGCAAACGTAAAGAAACT
                      ____________________________________________________________
consensus CATTCTCCGGAGTATAAACGAGACAGAAGTCGAATTCAAATTGGCAAACGTAAAGAAACT
 
. : . : . : . : . : . :
rJMSF002C12+ CTGGCAGAGATTCTTTTATCGCGATTCCATCTCCCTTGAAGCTGAGAGACAAAAGGATGC
rJMSF048B20+ CTGGCAGAGATTCTTTTATCGCGATTCCATCTCCCTTGAAGCTGAGAGACAAAAGGATGC
rJMSF013B18+ CTGGCAGAGATTCTTTTATCGCGATTCCATCTCCCTTGAAGCTGAGAGACAAAAGGATGC
                      ____________________________________________________________
consensus CTGGCAGAGATTCTTTTATCGCGATTCCATCTCCCTTGAAGCTGAGAGACAAAAGGATGC
 
. : . : . : . : . : . :
rJMSF002C12+ GTCTGGGCGCATCGATGACTGGGCCGAGCAGCTTTCACAGCTAAAGGAAGACGATGTCTT
rJMSF048B20+ GTCTGGGCGCATCGATGACTGGGCCGAGCAGCTTTCACAGCTAAAGGAAGACGATGTCTT
rJMSF013B18+ GTCTGGGCGCATCGATGACTGGGCCGAGCAGCTTTCACAGCTAAAGGAAGACGATGTCTT
                      ____________________________________________________________
consensus GTCTGGGCGCATCGATGACTGGGCCGAGCAGCTTTCACAGCTAAAGGAAGACGATGTCTT
 
. : . : . : . : . : . :
rJMSF002C12+ CGCCACATTCATACAGGTGCTGCACTACAAGCTACACAACGACCCTTGGAGACGACTAGT
rJMSF048B20+ CGCCACATTCATACAGGTGCTGCACTACAAGCTACACAACGACCCTTGGAGACGACTAGT
rJMSF013B18+ CGCCACATTCATACAGGTGCTGCACTACAAGCTACACAACGACCCTTGGAGACGACTAGT
                      ____________________________________________________________
consensus CGCCACATTCATACAGGTGCTGCACTACAAGCTACACAACGACCCTTGGAGACGACTAGT
 
. : . : . : . : . : . :
rJMSF002C12+ TCCTCGGAGGAAAAAGGAATTCGGATTGCCTGGAGAATGCTTAATGAGAAGATGATGTAT
rJMSF048B20+ TCCTCGGAGGAAAAAGGAATTCGGATTGCCTGGAGAATGCTTAATGAGAAGATGATGTAT
rJMSF013B18+ TCCTCGGAGGAAAAAGGAATTCGGATTGCCTGGAGAATGCTTAATGAGAAGATGATGTAT
                      ____________________________________________________________
consensus TCCTCGGAGGAAAAAGGAATTCGGATTGCCTGGAGAATGCTTAATGAGAAGATGATGTAT
 
. : . : . : . : . : . :
rJMSF002C12+ ACAGAAAATGAAAATATATATATTTGTTAGAACACAGACAGCAGCTAAGGCATAAGAATG
rJMSF048B20+ ACAGAAAATGAAAATATATATATTTGTTAGAACACAGACAGCAGCTAAGGCATAAGAATG
rJMSF013B18+ ACAGAAAATGAAAATATATATATTTGTTAGAACACAGACAGCAGCTAAGGCATAAGAATG
                      ____________________________________________________________
consensus ACAGAAAATGAAAATATATATATTTGTTAGAACACAGACAGCAGCTAAGGCATAAGAATG
 
. : . : . : . : . : . :
rJMSF002C12+ CCAACTGCAGGAGATGGAGATCTAAAG
rJMSF048B20+ CCAACTGCAGGAGATGGAGATCTAAAGGGGAGCCACAAGAAGGCCACAATTTTGGCGAAA
rJMSF013B18+ CCAACTGCAGGAGATGGAGATCTAAAGGGGAGCCACAAGAAGGCCACAATTTTGGCGAAA
                      ____________________________________________________________
consensus CCAACTGCAGGAGATGGAGATCTAAAGGGGAGCCACAAGAAGGCCACAATTTTGGCGAAA
 
. : . : . : . : . : . :
rJMSF048B20+ ATACAAAATT
rJMSF013B18+ ATACAAAATTTTCTATGCATATATCTTAGTAATATAACAGCATTGCAAAATTACATTCTT
                      ____________________________________________________________
consensus ATACAAAATTTTCTATGCATATATCTTAGTAATATAACAGCATTGCAAAATTACATTCTT
 
. : . : . : . : . : . :
rJMSF013B18+ TTATAGACCTGTAAATCTGTTGGCACCTGGTAACAAATCATACTAAAAAAGATCAGAAAG
                      ____________________________________________________________
consensus TTATAGACCTGTAAATCTGTTGGCACCTGGTAACAAATCATACTAAAAAAGATCAGAAAG