Contig 007046:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF010B24Sequence279010718 (4)emb|CBI14907.3|3e-13unnamed protein product [Vitis vinifera]723007046 (4)ref|XP_006351434.1|3e-102PREDICTED: leucine-rich repeat receptor-like serine/threonine/tyrosine-protein
JMSF024P16Sequence664010718 (4)emb|CBI14907.3|8e-60unnamed protein product [Vitis vinifera]815007046 (4)ref|XP_006351434.1|1e-113PREDICTED: leucine-rich repeat receptor-like serine/threonine/tyrosine-protein
JMSF030J05Sequence678010718 (4)emb|CBI14907.3|1e-69unnamed protein product [Vitis vinifera]743007046 (4)ref|XP_006351434.1|2e-114PREDICTED: leucine-rich repeat receptor-like serine/threonine/tyrosine-protein
JMSF033L20Sequence629008709 (4)gb|KDO77195.1|2e-11hypothetical protein CISIN_1g033622mg [Citrus sinensis]615007046 (4)ref|XP_006351434.1|1e-98PREDICTED: leucine-rich repeat receptor-like serine/threonine/tyrosine-protein

Alignment

This contig is upended


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rJMSF024P16+                                                                  CCAT
                      ____________________________________________________________
consensus                                                                     CCAT
 
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rJMSF030J05+                                                            AGCCTACCAG
rJMSF024P16+          ATGCCNAGACCAGACTGTCATTACCTAGTTTATGNATTCATGAAGAATGGAGCCTACAAG
                      ____________________________________________________________
consensus             ATGCCNAGACCAGACTGTCATTACCTAGTTTATGNATTCATGAAGAATGGAGCCTACCAG
 
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rJMSF030J05+          ATGCACTCCAGGGTGGNCCTGAATTAGATTGGCTGGCGCGCCACAGAATTGCAGTGGGAA
rJMSF024P16+          ATGCACTCCAGGGTGGGCCTGAATTAGATTGGCTGGCGCGCCACAGAATTGCAGTGGGAA
rJMSF010B24+                                                                   GAA
                      ____________________________________________________________
consensus             ATGCACTCCAGGGTGGGCCTGAATTAGATTGGCTGGCGCGCCACAGAATTGCAGTGGGAA
 
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rJMSF030J05+          TAGCAGCCGGTCTGGAGTATCTTCACATAAATCATACTCAACGCATAATTCACAGGGATC
rJMSF024P16+          TAGCAGCCGGTCTGGAGTATCTTCACATAAATCATACTCAACGCATAATTCACAGGGATC
rJMSF033L20+                              CTTCACATAAATCATACTCAACGCATAATTCACAGGGATC
rJMSF010B24+          TAGCAGCCGGTCTGGAGTATCTTCACATAAATCATACTCAACGCATAATTCACAGGGATC
                      ____________________________________________________________
consensus             TAGCAGCCGGTCTGGAGTATCTTCACATAAATCATACTCAACGCATAATTCACAGGGATC
 
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rJMSF030J05+          TGAAGCCAGCAAATGTCCTCCTAGATGACGACATGGAGGCAAGGATTGCAGACTTTGGGC
rJMSF024P16+          TGAAGCCAGCAAATGTCCTCCTAGATGACGACATGGAGGCAAGGATTGCAGACTTTGGGC
rJMSF033L20+          TGAAGCCAGCAAATGTCCTCCTAGATGACGACATGGAGGCAAGGATTGCAGACTTTGGGC
rJMSF010B24+          TGAAGCCAGCAAATGTCCTCCTAGATGACGACATGGAGGCAAGGATTGCAGACTTTGGGC
                      ____________________________________________________________
consensus             TGAAGCCAGCAAATGTCCTCCTAGATGACGACATGGAGGCAAGGATTGCAGACTTTGGGC
 
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rJMSF030J05+          TGGCAAAGGCAGTCCCCGATGCTCATACCCATATCACTACTTCGAATGTGGCAGGAACTG
rJMSF024P16+          TGGCAAAGGCAGTCCCCGATGCTCATACCCATATCACTACTTCGAATGTGGCAGGAACTG
rJMSF033L20+          TGGCAAAGGCAGTCCCCGATGCTCATACCCATATCACTACTTCGAATGTGGCAGGAACTG
rJMSF010B24+          TGGCAAAGGCAGTCCCCGATGCTCATACCCATATCACTACTTCGAATGTGGCAGGAACTG
                      ____________________________________________________________
consensus             TGGCAAAGGCAGTCCCCGATGCTCATACCCATATCACTACTTCGAATGTGGCAGGAACTG
 
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rJMSF030J05+          TGGGGTATATCGCTCCCGAATATCACCAAACACTCAAGTTCACGGACAAGTGTGATATCT
rJMSF024P16+          TGGGGTATATCGCTCCCGAATATCACCAAACACTCAAGTTCACGGACAAGTGTGATATCT
rJMSF033L20+          TGGNGTATATCGCTCCCGAATATCACCAAACACTCAAGTTCACGGACAAGTGTGATATCT
rJMSF010B24+          TGGGGTATATCGCTCCCGAATATCACCAAACACTCAAGTTCACGGACAAGTGTGATATCT
                      ____________________________________________________________
consensus             TGGGGTATATCGCTCCCGAATATCACCAAACACTCAAGTTCACGGACAAGTGTGATATCT
 
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rJMSF030J05+          ACAGTTTCGGGGTGTTATTAGGCGTTCTTGTGATGGGGAAGCTTCCATCGGATGAGTTTT
rJMSF024P16+          ACAGTTTCGGGGTGTTATTAGGCGTTCTTGTGATGGGGAAGCTTCCATCGGATGAGTTTT
rJMSF033L20+          ACAGTTTCGNGGTGTTATTAGGCGTTCTTGTGATGGGGAAGCTTCCATCGGATGAGTTTT
rJMSF010B24+          ACAGTTTCGGGGTGTTATTAGGCGTTCTTGTGATGGGGAAGCTTCCATCGGATGAGTTTT
                      ____________________________________________________________
consensus             ACAGTTTCGGGGTGTTATTAGGCGTTCTTGTGATGGGGAAGCTTCCATCGGATGAGTTTT
 
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rJMSF030J05+          TCCAACACACATCTGAGATGAGTTTGGTGAAATGGTTGAGAAATGTGATGACTGCTTCTG
rJMSF024P16+          TCCAACACACATCTGAGATGAGTTTGGTGAAATGGTTGAGAAATGTGATGACTGCTTCTG
rJMSF033L20+          TCCAACACACATCTGAGATGAGTTTGGTGAAATGGTTGAGAAATGTGATGACTGCTTCTG
rJMSF010B24+          TCCAACACACATCTGAGATGAGTTTGGTGAAATGGTTGAGAAATGTGATGACTGCTTCTG
                      ____________________________________________________________
consensus             TCCAACACACATCTGAGATGAGTTTGGTGAAATGGTTGAGAAATGTGATGACTGCTTCTG
 
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rJMSF030J05+          ACGATCCCAAGCGAGCCATTGATCCTAAGCTGTTAGGAAATGGGTACGAGGAGCAAATGC
rJMSF024P16+          ACGATCCCAAGCGAGCCATTGATCCTAAGCTGTTAGGAAATGGGTACGAGGAGCAAATGC
rJMSF033L20+          ACGATCCCAAGCGAGCCATTGATCCTAAGCTGTTAGGAAATGGGTACGAGGAGCAAATGC
rJMSF010B24+          ACGATCCCAAGCGAGCCATTGATCCTAAGCTGTTAGGAAATGGGTACGAGGAGCAAATGC
                      ____________________________________________________________
consensus             ACGATCCCAAGCGAGCCATTGATCCTAAGCTGTTAGGAAATGGGTACGAGGAGCAAATGC
 
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rJMSF030J05+          TTTTGGTTCTCAAGATTGCTTGCTTTTGCACTCTTGATAATCCAAAAGAGAGGCCTAACA
rJMSF024P16+          TTTTGGTTCTCAAGATTGCTTGCTTTTGCACTCTTGATAATCCAAAAGAGAGGCCTAACA
rJMSF033L20+          TTTTGGTTCTCAAGATTGCTTGCTTTTGCACTCTTGATAATCCAAAAGAGAGGCCTAACA
rJMSF010B24+          TTTTGGTTCTCAAGATTGCTTGCTTTTGCACTCTTGATAATCCAAAAGAGAGGCCTAACA
                      ____________________________________________________________
consensus             TTTTGGTTCTCAAGATTGCTTGCTTTTGCACTCTTGATAATCCAAAAGAGAGGCCTAACA
 
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rJMSF030J05+          GTAAGGACGTCAGGTGTATGTTAATGCAGATTAAACATGAGTAGTATGATTGAGGGAAAG
rJMSF024P16+          GTAAGGACGTCAGGTGTATGTTAATGCAGATTAAACATGAGTAGTATGATTGAGGGAAAG
rJMSF033L20+          GTAAGGACGTCAGGTGTATGTTAATGCAGATTAAACATGAGTAGTATGATTGAGGGAAAG
rJMSF010B24+          GTAAGGACGTCAGGTGTATGTTAATGCAGATTAAACATGAGTAGTATGATTGAGGGAAAG
                      ____________________________________________________________
consensus             GTAAGGACGTCAGGTGTATGTTAATGCAGATTAAACATGAGTAGTATGATTGAGGGAAAG
 
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rJMSF030J05+          AATAAGCTATCCTAGCACGATATGTACTGTTAAGTTTAAGTTAGTTGCATCGCCTCGCCT
rJMSF024P16+          AATAAGCTATCCTAGCACGATATGTACTGTTAAGTTTAAGTTAGTTGCATCGCCTCGCCT
rJMSF033L20+          AATAAGCTATCCTAGCACGATATGTACTGTTAAGTTTNAGTTAGTNGCATCGCCTCGCCT
rJMSF010B24+          AATAAGCTATCCTAGCACGATATGTACTGTTAAGTTTAAGTTAGTTGCATCGCCTCGCCT
                      ____________________________________________________________
consensus             AATAAGCTATCCTAGCACGATATGTACTGTTAAGTTTAAGTTAGTTGCATCGCCTCGCCT
 
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rJMSF030J05+          CGAGGTTGGTTACTTTACGTTCGTTGTTCAAATTAATTTCTGTTCTGTAGTTACGTTGGC
rJMSF024P16+          CGAGGTTGGTTACTTTACGTTCGTTGTTCAAATTAATTTCTGTTCTGTAGTTACGTTGGC
rJMSF033L20+          CGAGGTTGGTTACTTTACGTTCGTTGTTCAAATTA                         
rJMSF010B24+          CGAGGTTGGTTACTTTACGTTCGTTGTTCAAATTAATTTCTGTTCTGTAGTTACGTTGGC
                      ____________________________________________________________
consensus             CGAGGTTGGTTACTTTACGTTCGTTGTTCAAATTAATTTCTGTTCTGTAGTTACGTTGGC
 
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rJMSF030J05+          CGGGTT                                                      
rJMSF024P16+          CGGGTTAATGTTGAGCTATATATAC                                   
rJMSF010B24+          CGGGTTAATGTTGAGCTATATATACATATTTGTAGTGTGTGTGGATGAATATAATATGTA
                      ____________________________________________________________
consensus             CGGGTTAATGTTGAGCTATATATACATATTTGTAGTGTGTGTGGATGAATATAATATGTA