Contig 007044:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS158D03Sequence504007044 (3)emb|CDP16326.1|8e-87unnamed protein product [Coffea canephora]
JMSF009O03Sequence292000508 (9)ref|XP_009624643.1|2e-10PREDICTED: 4-alpha-glucanotransferase DPE2 [Nicotiana tomentosiformis] ref|XP_00745007044 (3)emb|CDP16326.1|8e-93unnamed protein product [Coffea canephora]
JMSF011L24Sequence310000508 (9)ref|XP_009803735.1|116PREDICTED: 4-alpha-glucanotransferase DPE2-like [Nicotiana sylvestris] ref|XP_00747007044 (3)emb|CDP16326.1|2e-93unnamed protein product [Coffea canephora]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS158D03- TGCGTTCATC
rJMSF011L24+ CTNGGCATGATTCCCGCNTGCGTTCATC
rJMSF009O03+ GGCATGATTCCCGCTTGCGTTCATC
                      ____________________________________________________________
consensus CTNGGCATGATTCCCGCTTGCGTTCATC
 
. : . : . : . : . : . :
JMFS158D03- CTGTGATGGAAGAGTGGGGCTTAATAGGCTTACGGATTCAGCGCATGCCAAGTGATTCCG
rJMSF011L24+ CTGTGATGGAAGAGTTGGGCTTAATAGGCTTACGGATTCAGCGCATGCCAAGTGATTCCG
rJMSF009O03+ CTGTGATGGAAGAGTTGGGCTTAATAGGCTTACGGATTCAGCGCATGCCAAGTGATTCCG
                      ____________________________________________________________
consensus CTGTGATGGAAGAGTTGGGCTTAATAGGCTTACGGATTCAGCGCATGCCAAGTGATTCCG
 
. : . : . : . : . : . :
JMFS158D03- GAGTGGAATTCGGTATTCCTTCTACATACCCCTATATGACGGTATGTGCTCCATCTTGCC
rJMSF011L24+ GAGTGGAATTCGGTATTCCTTCTACATACCCCTATATGACGGTATGTGCTCCATCTTGCC
rJMSF009O03+ GAGTGGAATTCGGTATTCCTTCTACATACCCCTATATGACGGTATGTGCTCCATCTTGCC
                      ____________________________________________________________
consensus GAGTGGAATTCGGTATTCCTTCTACATACCCCTATATGACGGTATGTGCTCCATCTTGCC
 
. : . : . : . : . : . :
JMFS158D03- ATGACTGCTCCACTCTGCGCGCCTGGTGGGAAGAAGATGACGAAAGAAGGCGTCGCTTTT
rJMSF011L24+ ATGACTGCTCCACTCTGCGCGCCTGGTGGGAAGAAGATGACGAAAGAAGGCGTCGCTTTT
rJMSF009O03+ ATGACTGCTCCACTCTGCGCGCCTGGTGGGAAGAAGATGACGAAAGAAGGCGTCGCTTTT
                      ____________________________________________________________
consensus ATGACTGCTCCACTCTGCGCGCCTGGTGGGAAGAAGATGACGAAAGAAGGCGTCGCTTTT
 
. : . : . : . : . : . :
JMFS158D03- TTCAAACAGTCGTGGGGTCCGATGATTTGCCTCCTGATCAATGTACTCCTGAAATTGTCT
rJMSF011L24+ TTCAAACAGTCGTGGGGTCCGATGATTTGCCTCCTGATCAATGTACTCCTGAAATTGTCT
rJMSF009O03+ TTCAAACAGTCGTGGGGTCCGATGATTTGCCTCCTGATCAATGTACTCCTGAAATTGTCT
                      ____________________________________________________________
consensus TTCAAACAGTCGTGGGGTCCGATGATTTGCCTCCTGATCAATGTACTCCTGAAATTGTCT
 
. : . : . : . : . : . :
JMFS158D03- ACTTCGTCTTGCATCAGCATTTCGAGTCCCCATCGATGTGGTCAATCTTTCCTCTCCAGG
rJMSF011L24+ ACTTCGTCTTGCATCAGCATTTCGAGTCCCCATCGATGTGGTCAATCTTTCCTCTCCAGG
rJMSF009O03+ ACTTCGTCTTGCATCAGCATTTCGAGTCCCCATCGATGTGGTCAATCTTTCCTCTCCAGG
                      ____________________________________________________________
consensus ACTTCGTCTTGCATCAGCATTTCGAGTCCCCATCGATGTGGTCAATCTTTCCTCTCCAGG
 
. : . : . : . : . : . :
JMFS158D03- ATTTGCTAGCACTCAAAGAAGCCTATACAACCCGCCCTGCAGTGGAGGAGACGATAAACG
rJMSF011L24+ ATTTGCTAGCACTCAAAGAAGCCTATACAACCCGCCCTGCAGTGGAGGAGACGATAAACG
rJMSF009O03+ ATTTGCTAGCACTCAAAGAAGCCTATACAACCCGCCCTGCAGTGGAGGAGACGATAAACG
                      ____________________________________________________________
consensus ATTTGCTAGCACTCAAAGAAGCCTATACAACCCGCCCTGCAGTGGAGGAGACGATAAACG
 
. : . : . : . : . : . :
JMFS158D03- ACCCAACAAATCCAAAACACTACTGGCAATATCGTGTACACGTGACAATGGAGTCCTTGC
rJMSF011L24+ ACCCAACAAATCCAAAACACTACTGGCAATATCGTGTACACGTGACAATGGAGTCCTTGC
rJMSF009O03+ ACCCAACAAATCCAAAACACTACTGGCAATATCGTGTACACGTGACAATGGAGTCCTTGC
                      ____________________________________________________________
consensus ACCCAACAAATCCAAAACACTACTGGCAATATCGTGTACACGTGACAATGGAGTCCTTGC
 
. : . : . : . : . : . :
JMFS158D03- TCAAAGATAAAGAGCTGACGGGTATCATCAAAAATCTCGTCCATGGGAGCGGGAGATCTT
rJMSF011L24+ TCAAAGATAAAGAGCTGACGGGTATCATCAAAAATCTCGTCCATGGGAGCGGGAGATCTT
rJMSF009O03+ TCAAAGATAAAGAGCTGACGGGTATCATCAAAAATCTCGTCCATGGGAGCGGGAGATCTT
                      ____________________________________________________________
consensus TCAAAGATAAAGAGCTGACGGGTATCATCAAAAATCTCGTCCATGGGAGCGGGAGATCTT
 
. : . : . : . : . : . :
JMFS158D03- ATCCGGGAAGG
rJMSF011L24+ ATCCGGGAAGGCTGCAGGATGTTGCTAGCGATCAAGGGAAAAGTGTTCCCTTGGCAGGGT
rJMSF009O03+ ATCCGGGAAGGCTGCAGGATGTTGCTAGCGATCAAGGGAAAAGTGTTCCCTTGGCAGGGT
                      ____________________________________________________________
consensus ATCCGGGAAGGCTGCAGGATGTTGCTAGCGATCAAGGGAAAAGTGTTCCCTTGGCAGGGT
 
. : . : . : . : . : . :
rJMSF011L24+ AGGGAAGTGGAGTTTCCCAGAAAGAAATAGCAGCAGTCTAATGAGGTTGATATTGCTTTT
rJMSF009O03+ AGGGAAGTGGAGTTTCCCAGAAAGAAATAGCAGCAGTCTAATGAGGTTGATATTGCTTTT
                      ____________________________________________________________
consensus AGGGAAGTGGAGTTTCCCAGAAAGAAATAGCAGCAGTCTAATGAGGTTGATATTGCTTTT
 
. : . : . : . : . : . :
rJMSF011L24+ ATTCCACTTCTAGATAGTAAATTATGCAGGACTGGCAATTGCTACTTTTACATTTTATGG
rJMSF009O03+ ATTCCACTTCTAGATAGTAAATTATGCAGGACTGGCAATTGCTACTTTTACATTTTATGG
                      ____________________________________________________________
consensus ATTCCACTTCTAGATAGTAAATTATGCAGGACTGGCAATTGCTACTTTTACATTTTATGG
 
. : . : . : . : . : . :
rJMSF011L24+ TAGATTTCATGCTATTTATGTTGCTGTCATACACTGTAATCTGAATAATGATTATACAT
rJMSF009O03+ TAGATTTCATGCTATTTATGTTGCTGTCATACACTGTAATCTGAATAATGATTATACATT
                      ____________________________________________________________
consensus TAGATTTCATGCTATTTATGTTGCTGTCATACACTGTAATCTGAATAATGATTATACATT