Contig 007036:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF008G05Sequence368010799 (4)ref|XP_007050704.1|7e-05Mitochondrial transcription termination factor family protein isoform 1 [Theobr777007036 (2)ref|XP_009628723.1|329PREDICTED: uncharacterized protein LOC104119034 [Nicotiana tomentosiformis]
JMSF034O07Sequence657010799 (4)ref|XP_007050704.1|8e-37Mitochondrial transcription termination factor family protein isoform 1 [Theobr565007036 (2)ref|XP_009628723.1|233PREDICTED: uncharacterized protein LOC104119034 [Nicotiana tomentosiformis]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF008G05+ GAGAGNTTAGGAATTCCAATATTAGCCGTGGNCAAGGTTGATTGAGAAAGATCCACAC
                      ____________________________________________________________
consensus GAGAGNTTAGGAATTCCAATATTAGCCGTGGNCAAGGTTGATTGAGAAAGATCCACAC
 
. : . : . : . : . : . :
rJMSF008G05+ ATTCTTGGATTTNGTCTAGAAGATAGAGTGAAACCAAATGTGCAATCTCTCCTACACTTC
                      ____________________________________________________________
consensus ATTCTTGGATTTNGTCTAGAAGATAGAGTGAAACCAAATGTGCAATCTCTCCTACACTTC
 
. : . : . : . : . : . :
rJMSF008G05+ AATGTCAGGCAAACATCACTCGCTTCAGTCATTGCCCAATATCCTGCAATTTTAGGAATG
                      ____________________________________________________________
consensus AATGTCAGGCAAACATCACTCGCTTCAGTCATTGCCCAATATCCTGCAATTTTAGGAATG
 
. : . : . : . : . : . :
rJMSF034O07+ TACAAACTCAACAAAGTTTTCTCAGTTCACTTCTGGATATAAGC
rJMSF008G05+ AATCTCGAGGAAAAGCTACAAACTCAACAAAGTTTTCTCAGTTCACTTCTGGATATAAGC
                      ____________________________________________________________
consensus AATCTCGAGGAAAAGCTACAAACTCAACAAAGTTTTCTCAGTTCACTTCTGGATATAAGC
 
. : . : . : . : . : . :
rJMSF034O07+ TCCGAGGACTNTGGTAGAGTTGTCGAGAAGATGCCACAGGCTGTGAGCCTCAACAACTCC
rJMSF008G05+ TCCGAGGACTTTGGTAGAGTTGTCGAGAAGATGCCACAGGCTGTGAGCCTCAACAACTCC
                      ____________________________________________________________
consensus TCCGAGGACTTTGGTAGAGTTGTCGAGAAGATGCCACAGGCTGTGAGCCTCAACAACTCC
 
. : . : . : . : . : . :
rJMSF034O07+ CCAACACGGAAGCATGTCGATTTCCTGAAGGCATGCGGTTTTTCCTCAGAACANCTGAAA
rJMSF008G05+ CCAACACGGAAGCATGTCGATTTCCTGAAGGCATGCGGTTTTTCCTCAGAACAACTGAAA
                      ____________________________________________________________
consensus CCAACACGGAAGCATGTCGATTTCCTGAAGGCATGCGGTTTTTCCTCAGAACAACTGAAA
 
. : . : . : . : . : . :
rJMSF034O07+ AAGATGGTCGTCGGGTGCCCCCAATTACTCGCCTNGAATATNGACATCATGAANCAAAGT
rJMSF008G05+ AAGATGGTCGTCGGGTGCCCCCAATTACTCGCCTTGAATATCGACATCATGAAACAAAGT
                      ____________________________________________________________
consensus AAGATGGTCGTCGGGTGCCCCCAATTACTCGCCTTGAATATCGACATCATGAAACAAAGT
 
. : . : . : . : . : . :
rJMSF034O07+ TTTGATTACTTCAAANCCACGATGGAGAGGCCNTTGGAGGACTTGGTTGATTTCCCCGCG
rJMSF008G05+ TTTGATTACTTCAAAACCACGATGGAGAGGCCATTGGAGGACTTGGTTGATTTCCCCGCG
                      ____________________________________________________________
consensus TTTGATTACTTCAAAACCACGATGGAGAGGCCATTGGAGGACTTGGTTGATTTCCCCGCG
 
. : . : . : . : . : . :
rJMSF034O07+ TTCTTCACATNCAGCCTCGAGTNCACCATAAAACCCAGACACCGAAGGATTGCAGCAAAG
rJMSF008G05+ TTCTTCACATACAGCCTCGAGTCCACCATAAAACCCAGACACCGAAGGATTGCAGCAAAG
                      ____________________________________________________________
consensus TTCTTCACATACAGCCTCGAGTCCACCATAAAACCCAGACACCGAAGGATTGCAGCAAAG
 
. : . : . : . : . : . :
rJMSF034O07+ GGCTTAAAGTGTTCTCTCGCATGGATGCTCAACTGNTCAGACGCGAAATTCAAGGACCGG
rJMSF008G05+ GGCTTAAAGTGTTCTCTCGCATGGATGCTCAACTGCTCAGACGCGAAATTCAAGGACCGG
                      ____________________________________________________________
consensus GGCTTAAAGTGTTCTCTCGCATGGATGCTCAACTGCTCAGACGCGAAATTCAAGGACCGG
 
. : . : . : . : . : . :
rJMSF034O07+ ATGCATTATGACTCCATCGACATGGAAGAGATGGAATCGAGTCCTTCCTCCTTTGACATG
rJMSF008G05+ ATGCATTATGACTCCATCGACATGGAAGAGATGGAATCGAGTCCTTCCTCCTTTGACATG
                      ____________________________________________________________
consensus ATGCATTATGACTCCATCGACATGGAAGAGATGGAATCGAGTCCTTCCTCCTTTGACATG
 
. : . : . : . : . : . :
rJMSF034O07+ AACAGCCTGATGCAACCCAGAAGCTACGATTCGGAATCTGAGTATGATGAAGATGAGCAG
rJMSF008G05+ AACAGCCTGATGCAACCCAGAAGCTACGATTCGGAATCTGAGTATGATGAAGATGA-CAG
                      ____________________________________________________________
consensus AACAGCCTGATGCAACCCAGAAGCTACGATTCGGAATCTGAGTATGATGAAGATGAGCAG
 
. : . : . : . : . : . :
rJMSF034O07+ TGACACTGATGATTNGTATAGACATTATTCTGTACAATATA
rJMSF008G05+ TGACACTGATGATTAGTATAGACATTATTCTGTACAATATATTCAATTATGTTATGTACC
                      ____________________________________________________________
consensus TGACACTGATGATTAGTATAGACATTATTCTGTACAATATATTCAATTATGTTATGTACC