Contig 007027:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF005K14Sequence400006555 (8)gb|EYU42243.1|4e-45hypothetical protein MIMGU_mgv1a011536mg [Erythranthe guttata]251007027 (5)
JMSF005M16Sequence246013498 (3)275007027 (5)ref|XP_009600347.1|8e-08PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g07650
JMSF039M20Sequence581013498 (3)ref|XP_011102070.1|3e-65PREDICTED: probable leucine-rich repeat receptor-like serine/threonine-protein 872007027 (5)ref|XP_007025271.1|2e-126Leucine-rich repeat transmembrane protein kinase [Theobroma cacao] gb|EOY27893.1
JMSF040P07Sequence408017910ref|XP_010655579.1|1e-17PREDICTED: probable leucine-rich repeat receptor-like serine/threonine-protein 853007027 (5)ref|XP_007025271.1|2e-126Leucine-rich repeat transmembrane protein kinase [Theobroma cacao] gb|EOY27893.1
JMSF047I19Sequence675013498 (3)ref|XP_006358134.1|5e-78PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g07650817007027 (5)ref|XP_004233025.1|4e-116PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g07650

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF039M20+ CTATGGGTGTTGTGTTGAGGGAAAG
rJMSF040P07+ GGGTGTTGTGTTGAGGGAAAG
                      ____________________________________________________________
consensus CTATGGGTGTTGTGTTGAGGGAAAG
 
. : . : . : . : . : . :
rJMSF039M20+ CAATTGTTGCTGGTGTATGAGTACTTGGAAANCAACAGCCTTGCTCATGCTCTTTTCGGT
rJMSF040P07+ CAATTGTTGCTGGTGTATGAGTACTTGGAAAACAACAGCCTTGCTCATGCTCTTTTCGGT
rJMSF047I19+ CATGCTCTTTTCGGT
                      ____________________________________________________________
consensus CAATTGTTGCTGGTGTATGAGTACTTGGAAAACAACAGCCTTGCTCATGCTCTTTTCGGT
 
. : . : . : . : . : . :
rJMSF039M20+ TCAGAAGAGTGTCAACCGAAAATAGATTGGCCTTCTAGACAAAGAATTTGTCTTGGTATT
rJMSF040P07+ TCAGAAGAGTGTCAACCGAAAATAGATTGGCCTTCTAGACAAAGAATTTGTCTTGGTATT
rJMSF047I19+ TCAGAAGAGTGTCAACCGAAAATAGATTGGCCTTCTAGACAAAGAATTTGTCTTGGTATT
                      ____________________________________________________________
consensus TCAGAAGAGTGTCAACCGAAAATAGATTGGCCTTCTAGACAAAGAATTTGTCTTGGTATT
 
. : . : . : . : . : . :
rJMSF039M20+ GCAAAAGGTTTAGTTTTTCTGCATGAAGAATCAGCAATAAAAATTGTTCATAGAGACATA
rJMSF040P07+ GCAAAAGGTTTAGTTTTTCTGCATGAAGAATCAGCAATAAAAATTGTTCATAGAGACATA
rJMSF047I19+ GCAAAAGGTTTAGTTTTTCTGCATGAAGAATCAGCAATAAAAATTGTTCATAGAGACATA
                      ____________________________________________________________
consensus GCAAAAGGTTTAGTTTTTCTGCATGAAGAATCAGCAATAAAAATTGTTCATAGAGACATA
 
. : . : . : . : . : . :
rJMSF039M20+ AAAGCCACCAATGTGCTTCTTGACAAAGAACTCAATCCGAAGATTTCTGACTTTGGCCTA
rJMSF040P07+ AAAGCCACCAATGTGCTTCTTGACAAAGAACTCAATCCGAAGATTTCTGACTTTGGCCTA
rJMSF047I19+ AAAGCCACCAATGTGCTTCTTGACAAAGAACTCAATCCGAAGATTTCTGACTTTGGCCTA
                      ____________________________________________________________
consensus AAAGCCACCAATGTGCTTCTTGACAAAGAACTCAATCCGAAGATTTCTGACTTTGGCCTA
 
. : . : . : . : . : . :
rJMSF039M20+ GCTAAACTCAATGATGATGCGAATACACATATTAGCACAAGAGTTGCCGGGACAATAGGA
rJMSF040P07+ GCTAAACTCAATGATGATGCGAATACACATATTAGCACAAGAGTTGCCGGGACAATAGGA
rJMSF047I19+ GCTAAACTCAATGATGATGCGAATACACATATTAGCACAAGAGTTGCCGGGACAATAGGA
                      ____________________________________________________________
consensus GCTAAACTCAATGATGATGCGAATACACATATTAGCACAAGAGTTGCCGGGACAATAGGA
 
. : . : . : . : . : . :
rJMSF039M20+ TACATGGCTCCTGAATATGCAATGTGGGGCTACTTAACATACAAAGCAGATGTCTATAGT
rJMSF040P07+ TACATGGCTCCTGAATATGCAATGTGGGGCTACTTAACATACAAAGCAGATGTCTATAGT
rJMSF047I19+ TACATGGCTCCTGAATATGCAATGTGGGGCTACTTAACATACAAAGCAGATGTCTATAGT
                      ____________________________________________________________
consensus TACATGGCTCCTGAATATGCAATGTGGGGCTACTTAACATACAAAGCAGATGTCTATAGT
 
. : . : . : . : . : . :
rJMSF039M20+ TTCGGTGTAGTGGCACTAGAAATTGTTGCAGGGAAGAGCAACATGAAGTATCGTCCTGAT
rJMSF040P07+ TTCGGTGTAGTGGCACTAGAAATTGTTGCAGGGAAGAGCAACATGAAGTATCGTCCTGAT
rJMSF047I19+ TTCGGTGTAGTGGCACTAGAAATTGTTGCAGGGAAGAGCAACATGAAGTATCGTCCTGAT
                      ____________________________________________________________
consensus TTCGGTGTAGTGGCACTAGAAATTGTTGCAGGGAAGAGCAACATGAAGTATCGTCCTGAT
 
. : . : . : . : . : . :
rJMSF039M20+ GAGAACTTTATTTGCATCCTTGATTGGGCCCTTGATCTTCAAAAAAAGGGGAACCTAATG
rJMSF040P07+ GAGAACTTTATTTGCATCCTTGATTGGGCCCTTGATCTTCAAAAAAAGGGGAACCTAATG
rJMSF047I19+ GAGAACTTTATTTGCATCCTTGATTGGGCCCTTGATCTTCAAAAAAAGGGGAACCTAATG
                      ____________________________________________________________
consensus GAGAACTTTATTTGCATCCTTGATTGGGCCCTTGATCTTCAAAAAAAGGGGAACCTAATG
 
. : . : . : . : . : . :
rJMSF039M20+ GAGCTAATAGATCCAAGATTGGGTTCTGATTTTGATAAAGAAGAGGCACTCAGAATGATC
rJMSF040P07+ GAGCTAATAGATCCAAGATTGGGTTCTGATTTTGATAAAGAAGAGGCACTCAGAATGATC
rJMSF047I19+ GAGCTAATAGATCCAAGATTGGGTTCTGATTTTGATAAAGAAGAGGCACTCAGAATGATC
                      ____________________________________________________________
consensus GAGCTAATAGATCCAAGATTGGGTTCTGATTTTGATAAAGAAGAGGCACTCAGAATGATC
 
. : . : . : . : . : . :
rJMSF039M20+ AAAGTGGCTTTGGTTTGTACTAATCCTTCACCCGCCCTAAGGCCATCAATGTCTGCAGTA
rJMSF040P07+ AAAGTGGCTTTGGTTTGTACTAATCCTTCACCCGCCCTAAGGCCATCAATGTCTGCAGTA
rJMSF047I19+ AAAGTGGCTTTGGTTTGTACTAATCCTTCACCCGCCCTAAGGCCATCAATGTCTGCAGTA
rJMSF005K14+ CCATCAATGTCTGCAGTA
rJMSF005M16+ TCCTTCACCCGCCCTAAGGCCATCAATGTCTGCAGTA
                      ____________________________________________________________
consensus AAAGTGGCTTTGGTTTGTACTAATCCTTCACCCGCCCTAAGGCCATCAATGTCTGCAGTA
 
. : . : . : . : . : . :
rJMSF039M20+ GTGAGCATGCTTGAAAGCCATGATGATATTCTTGAGTACAAATCCGATCTACATGAATTT
rJMSF040P07+ GTGAGCATGCTTGAAAGCCATGATGATATTCTTGAGTACAAATCCGATCTACATGAATTT
rJMSF047I19+ GTGAGCATGCTTGAAAGCCATGATGATATTCTTGAGTACAAATCCGATCTACATGAATTT
rJMSF005K14+ GTGAGCANGCTTGNAAGCCATGATGATATTNNTGAGTACAAATCCGATCTACATGAATTT
rJMSF005M16+ GTGAGCATGCTTGAAAGCCATGATGATATTCTTGAGTACAAATCCGATCTACATGAATTT
                      ____________________________________________________________
consensus GTGAGCATGCTTGAAAGCCATGATGATATTCTTGAGTACAAATCCGATCTACATGAATTT
 
. : . : . : . : . : . :
rJMSF039M20+ AACTTTGAAGCAATGAGAGATCATTATGATGAAATGCTAGTC
rJMSF040P07+ AACTTTGAAGCAATGAGAGATCATTATGATGAAATGCTAGTCAATGCAAGTGTTTCTCCC
rJMSF047I19+ AACTTTGAAGCAATGAGAGATCATTATGATGAAATGCTAGTCAATGCAAGTGTTTCTCCC
rJMSF005K14+ AACTTTGAAGCAATGNGAGATCATTNTGATGAAATGCTAGTCAATGCAAGTGTTTCTCCC
rJMSF005M16+ AACTTTGAAGCAATGAGAGATCATTATGATGAAATGCTAGTCAATGCAAGTGTTTCTCCC
                      ____________________________________________________________
consensus AACTTTGAAGCAATGAGAGATCATTATGATGAAATGCTAGTCAATGCAAGTGTTTCTCCC
 
. : . : . : . : . : . :
rJMSF040P07+ GACAACTCAGA-GTGCACACATCTAAATGAGGAACTACAGTAGTCCGTGGTGTTAGAAAA
rJMSF047I19+ GACAACTCAGA-GTGCACACATCTAAATGAGGAACTACAGTAGTCCGTGGTGTTAGAAAA
rJMSF005K14+ GNCAACTCAGACGTGCACACATCTAAATGAGGAACTACAGTNGTCCGTGGTGTTAGAAAA
rJMSF005M16+ GACAACTCAGA-GTGCACACATCTAAATGAGGAACTACAGTAGTCCGTGGTGTTAGAAAA
                      ____________________________________________________________
consensus GACAACTCAGA-GTGCACACATCTAAATGAGGAACTACAGTAGTCCGTGGTGTTAGAAAA
 
. : . : . : . : . : . :
rJMSF040P07+ TATTGGTTAATGGTGTA-AGAAAACACAAGAAAAAAATCAAGAATCAATAATTT
rJMSF047I19+ TATTGGTTAATGGTGTA-AGAAAACACAAGAAAAAAATCAAGAATCAATAATTT
rJMSF005K14+ TATTGGTTAATGGTGTACAGAAAACACATGAAAAAAATCAAGAATCAATAA
rJMSF005M16+ TATTGGTTAATGGTGTA-AGAAAACACAAGAAAAAAATCAAGAATCAATAATTTAAGCGG
                      ____________________________________________________________
consensus TATTGGTTAATGGTGTA-AGAAAACACAAGAAAAAAATCAAGAATCAATAATTTAAGCGG