Contig 007022:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF003M06Sequence403002241 (3)652007022 (3)ref|XP_009757714.1|3e-15PREDICTED: uncharacterized protein LOC104210476 isoform X3 [Nicotiana sylvestri
JMSF024G15Sequence738002241 (3)ref|XP_010318734.1|2e-19PREDICTED: uncharacterized protein LOC101253678 isoform X2 [Solanum lycopersicu676007022 (3)ref|XP_006341349.1|109PREDICTED: uncharacterized protein LOC102595715 [Solanum tuberosum]
JMSF025H09Sequence707002241 (3)ref|XP_004236455.1|1e-19PREDICTED: uncharacterized protein LOC101253678 isoform X1 [Solanum lycopersicu195007022 (3)ref|XP_009757723.1|2e-05PREDICTED: uncharacterized protein LOC104210476 isoform X4 [Nicotiana sylvestri

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF024G15+ TGGAGGAGAT
                      ____________________________________________________________
consensus TGGAGGAGAT
 
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rJMSF024G15+ TTTCGAAAAACATGGTGATATCGCTGCCAACTGTCCCTACCCATCGCGGGGGTTTAGGGC
                      ____________________________________________________________
consensus TTTCGAAAAACATGGTGATATCGCTGCCAACTGTCCCTACCCATCGCGGGGGTTTAGGGC
 
. : . : . : . : . : . :
rJMSF025H09+ TTGAGGTAATCTGTGATGTCATCAGACAACTGTGAACTAATGATTTGGGAAC
rJMSF024G15+ CTCCGTCTTTGAGGTAATCTGTGATGTCATCAGACAACTGTGAACTAATGATTTGGGAAC
rJMSF003M06+ TTGAGGTAATCTGTGATGTCATCAGACAACTGTGAACTAATGATTTGGGAAC
                      ____________________________________________________________
consensus CTCCGTCTTTGAGGTAATCTGTGATGTCATCAGACAACTGTGAACTAATGATTTGGGAAC
 
. : . : . : . : . : . :
rJMSF025H09+ CATTGTTTCGATGGTTGGACAGATGAAGACTGAAGTCTCGGACACTGCAGCAGCTGCTCA
rJMSF024G15+ CATTGTTTCGATGGTTGGACAGATGAAGACTGAAGTCTCGGACACTGCAGCTGCTGCTCA
rJMSF003M06+ CATTGTTTCGATGGTTGGACAGATGAAGACTGAAGTCTCGGACACTGCAGCTGCTGCTCA
                      ____________________________________________________________
consensus CATTGTTTCGATGGTTGGACAGATGAAGACTGAAGTCTCGGACACTGCAGCTGCTGCTCA
 
. : . : . : . : . : . :
rJMSF025H09+ TCTCGAGGTATCGTGGCTGAAGCAGATTCTCANTGATATTCCAACCGAGAATGATGGCCA
rJMSF024G15+ TCTCGAGGTATCGTGGCTGAAGCAGATTCTCAATGATATTCCAACCGAGAATGATGGCCA
rJMSF003M06+ TCTCGAGGTATCGTGGCTGAAGCAGATTCTCAATGATATTCCAACCGAGAATGATGGCCA
                      ____________________________________________________________
consensus TCTCGAGGTATCGTGGCTGAAGCAGATTCTCAATGATATTCCAACCGAGAATGATGGCCA
 
. : . : . : . : . : . :
rJMSF025H09+ GCT
rJMSF024G15+ GCTAGCAAGAGTAATCAGAAACACCGCACTTGTTAGTAAAGCAGCCAGGAAGGACTTGAC
rJMSF003M06+ GCTAGCAAGAGTAATCAGAAACACCGCACTTGTTAGTAAAGCAGCCAGGAAGGACTTGAC
                      ____________________________________________________________
consensus GCTAGCAAGAGTAATCAGAAACACCGCACTTGTTAGTAAAGCAGCCAGGAAGGACTTGAC
 
. : . : . : . : . : . :
rJMSF024G15+ ACAGAGAAAAGCCGAGCTTGTGATTGCAGAGCGCAGCTACGAGGAGGCCAAAAGACAGCT
rJMSF003M06+ ACAGAGAAAAGCCGAGCTTGTGATTGCAGAGCGCAGCTACGAGGAGGCCAAAAGACAGCT
                      ____________________________________________________________
consensus ACAGAGAAAAGCCGAGCTTGTGATTGCAGAGCGCAGCTACGAGGAGGCCAAAAGACAGCT
 
. : . : . : . : . : . :
rJMSF024G15+ TGAGCGTGCTGAACAGAGTAAACGAACAGCAGAAAGGGCAGTCGAGGTTCTTGAATCAGT
rJMSF003M06+ TGAGCGTGCTGAACAGAGTAAACGAACAGCAGAAAGGGCAGTCGAGGTTCTTGAATCAGT
                      ____________________________________________________________
consensus TGAGCGTGCTGAACAGAGTAAACGAACAGCAGAAAGGGCAGTCGAGGTTCTTGAATCAGT
 
. : . : . : . : . : . :
rJMSF024G15+ GAAGAAAACGGCCCAAAATGACATGGAGTTGAACTTCAAACGGAATGATCTGCAGAACAG
rJMSF003M06+ GAAGAAAACGGCCCAAAATGACATGGAGTTGAACTTCAAACGGAATGATCTGCAGAACAG
                      ____________________________________________________________
consensus GAAGAAAACGGCCCAAAATGACATGGAGTTGAACTTCAAACGGAATGATCTGCAGAACAG
 
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rJMSF024G15+ GTTCTTTACTCTCCATTAACCTCCCGGGGCCCCTCCTCTATCCCAAACCTCCTGTGCATG
rJMSF003M06+ GTTCTTTACTCTCCATTAACCTCCCGGGGCCCCTCCTCTATCCCAAACCTCCTGTGCATG
                      ____________________________________________________________
consensus GTTCTTTACTCTCCATTAACCTCCCGGGGCCCCTCCTCTATCCCAAACCTCCTGTGCATG
 
. : . : . : . : . : . :
rJMSF024G15+ ATACTACTATGTATCAAGTTTGCAGACCTTCGAGGGCTTCAGAGTAAGGGAAAATAATGG
rJMSF003M06+ ATACTACTATGTATCAAGTTTGCAGACCTTCGAGGGCTTCAGAGTAAGGGAAAATAATGG
                      ____________________________________________________________
consensus ATACTACTATGTATCAAGTTTGCAGACCTTCGAGGGCTTCAGAGTAAGGGAAAATAATGG
 
. : . : . : . : . : . :
rJMSF024G15+ CATGGTTCGAGTTCATTGTGAAGATTCGGGGAAAGAGCTGTTTGCTGAGAAATCCCAACG
rJMSF003M06+ CATGGTTCGAGTTCATTGTGAAGATTCGGGGAAAGAGCTGTTTGCTGAGAAATCCCAACG
                      ____________________________________________________________
consensus CATGGTTCGAGTTCATTGTGAAGATTCGGGGAAAGAGCTGTTTGCTGAGAAATCCCAACG
 
. : . : . : . : . : . :
rJMSF024G15+ GTGTTG
rJMSF003M06+ GTGTTGTTCTGAGCCCAGTAACTGATATCACAGTTTGCCCATGGTGGTGGATGAAGACCC
                      ____________________________________________________________
consensus GTGTTGTTCTGAGCCCAGTAACTGATATCACAGTTTGCCCATGGTGGTGGATGAAGACCC