Contig 007019:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF003F03Sequence364000562 (2)ref|XP_009600337.1|55.8PREDICTED: uncharacterized protein LOC104095826 [Nicotiana tomentosiformis]698007019 (2)emb|CDP05665.1|2e-36unnamed protein product [Coffea canephora]
JMSF004D10Sequence203019898126007019 (2)

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF003F03+ CCAGATATGCTTGCATATNTGAAAGAGCATCGCAAAAT
                      ____________________________________________________________
consensus CCAGATATGCTTGCATATNTGAAAGAGCATCGCAAAAT
 
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rJMSF003F03+ AATTACAAGAGCGGAGCTAGACGCTATTCTGGCAAAAGAGAAACCAGAAGAAATAGAGTN
                      ____________________________________________________________
consensus AATTACAAGAGCGGAGCTAGACGCTATTCTGGCAAAAGAGAAACCAGAAGAAATAGAGTN
 
. : . : . : . : . : . :
rJMSF003F03+ CACAGATATGGATGAAGCCATGGCACAAGCTGTTGACATCGGTGAAAATGATGATGAAGA
                      ____________________________________________________________
consensus CACAGATATGGATGAAGCCATGGCACAAGCTGTTGACATCGGTGAAAATGATGATGAAGA
 
. : . : . : . : . : . :
rJMSF003F03+ AGAGGGTGAAGTTGAAGAGGAGAAAATTTCTCGCAATTGGAGTGTTCTGAAAAGTAATCC
                      ____________________________________________________________
consensus AGAGGGTGAAGTTGAAGAGGAGAAAATTTCTCGCAATTGGAGTGTTCTGAAAAGTAATCC
 
. : . : . : . : . : . :
rJMSF003F03+ TGAGCTTCGCAAGACAAAGCCTAAACCGAAAAAGGAAAACATGTCTTTGGAAGAAGCTGT
                      ____________________________________________________________
consensus TGAGCTTCGCAAGACAAAGCCTAAACCGAAAAAGGAAAACATGTCTTTGGAAGAAGCTGT
 
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rJMSF004D10+ TTAACAGACTTCTTCATGGACTTTGAAGGCGATGAGTAGTAACT
rJMSF003F03+ AGATGATTCTGAAAACTTAACAGACTTCCTCATGGACTTTGAAGGCGATGAGTAGTAACT
                      ____________________________________________________________
consensus AGATGATTCTGAAAACTTAACAGACTTCTTCATGGACTTTGAAGGCGATGAGTAGTAACT
 
. : . : . : . : . : . :
rJMSF004D10+ CTATGCACCTCATGGTCGAATGATTCCCTATCTCGTTGCAGGATAAATAGAGATTCATCN
rJMSF003F03+ CTATGCACCTCATGGTCGAATGATTCCCTATCTCGTTGCAGGATAAATAGAGATTCATCT
                      ____________________________________________________________
consensus CTATGCACCTCATGGTCGAATGATTCCCTATCTCGTTGCAGGATAAATAGAGATTCATCT
 
. : . : . : . : . : . :
rJMSF004D10+ CGTTATATGATGAATATGTAGC
rJMSF003F03+ CGTTATATGATGAATATGTAGCTTTAAGCGATGTTCTGCTGCACGTTTGCTGAGTTGCTG
                      ____________________________________________________________
consensus CGTTATATGATGAATATGTAGCTTTAAGCGATGTTCTGCTGCACGTTTGCTGAGTTGCTG
 
. : . : . : . : . : . :
rJMSF003F03+ ATCATCTGGATAAGAACCTATATATGATATGATACGATGCCTTGTCACTGAAAAAAAAAT
                      ____________________________________________________________
consensus ATCATCTGGATAAGAACCTATATATGATATGATACGATGCCTTGTCACTGAAAAAAAAAT
 
. : . : . : . : . : . :
rJMSF003F03+ GTTATAAAATTTTGGTTCTTGAGACTAAGTAGCAAGGTTTCATGCTTTTATCAGAAATGG
                      ____________________________________________________________
consensus GTTATAAAATTTTGGTTCTTGAGACTAAGTAGCAAGGTTTCATGCTTTTATCAGAAATGG
 
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rJMSF003F03+ ATTGTCTGATCTTTGGTCTTTCATGTAGCAAAAAGGGAGCTCCTCCATCATGTGAATTTA
                      ____________________________________________________________
consensus ATTGTCTGATCTTTGGTCTTTCATGTAGCAAAAAGGGAGCTCCTCCATCATGTGAATTTA
 
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rJMSF003F03+ GTTCAGAGCCATAAACTTGAGGATTTAGTTTAAATGTAAATGGGTGTTTTACACCCCAAA
                      ____________________________________________________________
consensus GTTCAGAGCCATAAACTTGAGGATTTAGTTTAAATGTAAATGGGTGTTTTACACCCCAAA