Contig 007010:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF005K21Sequence485012825 (2)ref|XP_009619541.1|6e-67PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At5g45780709007010 (2)ref|XP_009619542.1|5e-84PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At5g45780
JMSF001L10Sequence513012825 (2)ref|XP_010316837.1|2e-62PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At5g45780666007010 (2)ref|XP_009619542.1|4e-71PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At5g45780

Alignment

This contig is upended


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rJMFF005K21+           CTAGACGAGAGCTTTGAGGCGGTTGTTGGGGACTTCGGGCTTGCTAAGCTCTTAGACTG
rJMSF001L10+                                                                AGACTG
                      ____________________________________________________________
consensus              CTAGACGAGAGCTTTGAGGCGGTTGTTGGGGACTTCGGGCTTGCTAAGCTCTTAGACTG
 
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rJMFF005K21+          CAGAGAGTCTCATGTCACGACTGCTGTCCGAGGCACCATAGGACATATTGCACCCGAGTA
rJMSF001L10+          CAGAGAGTCTCATGTCACGACTGCTGTCCGAGGCACCATAGGACATATTGCACCCGAGTA
                      ____________________________________________________________
consensus             CAGAGAGTCTCATGTCACGACTGCTGTCCGAGGCACCATAGGACATATTGCACCCGAGTA
 
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rJMFF005K21+          CCTGTCGACTGGACAGTCTTCTGAAAAAACCGACGTGTTTGGGTTCGGGATACTACTCTT
rJMSF001L10+          CCTGTCGACTGGACAGTCTTCTGAAAAAACCGACGTGTTTGGGTTCGGGATACTACTCTT
                      ____________________________________________________________
consensus             CCTGTCGACTGGACAGTCTTCTGAAAAAACCGACGTGTTTGGGTTCGGGATACTACTCTT
 
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rJMFF005K21+          GGAACTCATTACGGGGCTAAAGGCGCTAAACGCTGGTAATTCTCCGCTTCAGAAAGGCAC
rJMSF001L10+          GGAACTCATTACGGGGCTAAAGGCGCTAAACGCTGGTAATTCTCCGCTTCAGAAAGGCAC
                      ____________________________________________________________
consensus             GGAACTCATTACGGGGCTAAAGGCGCTAAACGCTGGTAATTCTCCGCTTCAGAAAGGCAC
 
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rJMFF005K21+          AATCCTTGACTGGGTGAGAAGCTTACACGACGAGAAGAGGCTGGAAGTGATTGTCGACAA
rJMSF001L10+          AATCCTTGACTGGGTGAGAAGCTTACACGACGAGAAGAGGCTGGAAGTGATTGTCGACAA
                      ____________________________________________________________
consensus             AATCCTTGACTGGGTGAGAAGCTTACACGACGAGAAGAGGCTGGAAGTGATTGTCGACAA
 
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rJMFF005K21+          GGATCTGAAGGGATGCTTTGACACGGAGGAGCTAGAGAAAACGGTGGATGTTGCCCTCAA
rJMSF001L10+          GGATCTGAAGGGATGCTTTGACACGGAGGAGCTAGAGAAAACGGTGGATGTTGCCCTCAA
                      ____________________________________________________________
consensus             GGATCTGAAGGGATGCTTTGACACGGAGGAGCTAGAGAAAACGGTGGATGTTGCCCTCAA
 
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rJMFF005K21+          GTGTACACAACCGAACCCGAACCAGCGTCCTAAGATGTCTCAAGTGTCGCGAATCCTTGA
rJMSF001L10+          GTGTACACAACCGAACCCGAACCAGCGTCCTAAGATGTCTCAAGTGTCGCGAATCCTTGA
                      ____________________________________________________________
consensus             GTGTACACAACCGAACCCGAACCAGCGTCCTAAGATGTCTCAAGTGTCGCGAATCCTTGA
 
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rJMFF005K21+          AGGCATCGCGGGGCAGATGGCTCCCACCGTCGTGGATGATTCGCAGGGCGGAGGAAGCAA
rJMSF001L10+          AGGCATCGCGGGGCAGATGGCTCCCACCGTCGTGGATGATTCGCAGGGCGGAGGAAGCAA
                      ____________________________________________________________
consensus             AGGCATCGCGGGGCAGATGGCTCCCACCGTCGTGGATGATTCGCAGGGCGGAGGAAGCAA
 
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rJMFF005K21+          TGCTGCCGCATCTGAAACAAGAGCTTTTAGTTTTTCACGAAATTTCAGCAGTGTTGAGGA
rJMSF001L10+          TGCTGCCGCATCTGAAACAAGAGCTTTTAGTTTTTCACGAAATTTCAGCAGTGTTGAGGA
                      ____________________________________________________________
consensus             TGCTGCCGCATCTGAAACAAGAGCTTTTAGTTTTTCACGAAATTTCAGCAGTGTTGAGGA
 
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rJMFF005K21+          ATCATCATTCATCATTGAGGCAATAGAGCTTTCAGGGCCTAGATAACACACACTTTTCTG
rJMSF001L10+          ATCATCATTCATCATTGAGGCAATAGAGCTTTCAGGGCCTAGATAACACACACTTTTCTG
                      ____________________________________________________________
consensus             ATCATCATTCATCATTGAGGCAATAGAGCTTTCAGGGCCTAGATAACACACACTTTTCTG
 
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rJMFF005K21+          GTGCTTAGACTCTGCAGATAAGGCATGCATTTGTTGATTAACACTAACTTTGGTGTTTGG
rJMSF001L10+          GTGCTTAGACTCTGCAGATAAGGCATGCATTTGTTGATGAACACTAACTTTGGTGTTTGG
                      ____________________________________________________________
consensus             GTGCTTAGACTCTGCAGATAAGGCATGCATTTGTTGATTAACACTAACTTTGGTGTTTGG
 
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rJMFF005K21+          GTAGGCTTTTGCTTGTAAACTTCTCTGCA-CATAGAATATGTGGTTAGTAC         
rJMSF001L10+          GTAGGCTTTTGCTTGTAAACTTCTCTGCACCATAGAATATGTGGTTAGTACTGTTAATTT
                      ____________________________________________________________
consensus             GTAGGCTTTTGCTTGTAAACTTCTCTGCACCATAGAATATGTGGTTAGTACTGTTAATTT