Contig 006999:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF050E05Sequence637007798 (5)607006999 (4)
JMSF011P21Sequence273007798 (5)709006999 (4)ref|XP_002325473.1|2e-43phosphatase 2C family protein [Populus trichocarpa] gb|ABK95223.1| unknown [Popu
JMSF030M17Sequence629007798 (5)664006999 (4)ref|XP_010111089.1|4e-18putative protein phosphatase 2C 33 [Morus notabilis] gb|EXC29951.1| putative pro
JMSF042D09Sequence730007798 (5)741006999 (4)ref|XP_002325473.1|9e-34phosphatase 2C family protein [Populus trichocarpa] gb|ABK95223.1| unknown [Popu

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF011P21+ CTGTACCAGA
rJMSF042D09+ TCTGTACCAGA
                      ____________________________________________________________
consensus TCTGTACCAGA
 
. : . : . : . : . : . :
rJMSF011P21+ TGTTTCATACAGGCAGTTAACAGAGAGAGATGAATTTATTATCTTGGCAACAGAT-GGGA
rJMSF042D09+ TGTTTCATACAGGCAGTTAACAGAGAGAGATGAATTTATTATCTTGGCAACAGATGGGGA
                      ____________________________________________________________
consensus TGTTTCATACAGGCAGTTAACAGAGAGAGATGAATTTATTATCTTGGCAACAGATGGGGA
 
. : . : . : . : . : . :
rJMSF011P21+ TTTGGGATGTGCTTTCAAACGAAGAGGTGGTAGAGATTGTGGGTTCAGCGCCTGCACGCT
rJMSF042D09+ TTTGGGATGTGCTTTCAAACGAAGAGGTGGTAGAGATTGTGGGTTCAGCGCCTGCACGCT
                      ____________________________________________________________
consensus TTTGGGATGTGCTTTCAAACGAAGAGGTGGTAGAGATTGTGGGTTCAGCGCCTGCACGCT
 
. : . : . : . : . : . :
rJMSF011P21+ CATCTGCAGCTAAACTCCTGGTTGAAACAGCTGTTCAAGGCTGGAGGACCAAATACCCAA
rJMSF042D09+ CATCTGCAGCTAAACTCCTGGTTGAAACAGCTGTTCAAGGCTGGAGGACCAAATACCCAA
rJMSF030M17+ AACAGCTGTTCAAGGCTGGAGGACCAAATACCCAA
                      ____________________________________________________________
consensus CATCTGCAGCTAAACTCCTGGTTGAAACAGCTGTTCAAGGCTGGAGGACCAAATACCCAA
 
. : . : . : . : . : . :
rJMSF011P21+ CTTCCAAAGTCGATGACTGTGCTGTTGTCTGCCTCTTCCTCAATTCACACTCAGACGATA
rJMSF042D09+ CTTCCAAAGTCGATGACTGTGCTGTTGTCTGCCTCTTCCTCAATTCACACTCAGACGATA
rJMSF030M17+ CTTCCAAAGTCGATGACTGTGCTGTTGTCTGCCTCTTCCTCAATTCACACTCAGACGATA
                      ____________________________________________________________
consensus CTTCCAAAGTCGATGACTGTGCTGTTGTCTGCCTCTTCCTCAATTCACACTCAGACGATA
 
. : . : . : . : . : . :
rJMSF011P21+ TATCTTCTGCCTTCAATGACAATGGGAAGGTAAAGGACCACTCGAGCACTGCTCGAAACG
rJMSF042D09+ TATCTTCTGCCTTCAATGACAATGGGAAGGTAAAGGACCACTCGAGCACTGCTCGAAACG
rJMSF030M17+ TATCTTCTGCCTTCAATGACAATGGGAAGGTAAAGGACCACTCGAGCACTGCTCGAAACG
rJMFF050E05+ CGAAACG
                      ____________________________________________________________
consensus TATCTTCTGCCTTCAATGACAATGGGAAGGTAAAGGACCACTCGAGCACTGCTCGAAACG
 
. : . : . : . : . : . :
rJMSF011P21+ GTGAAGATGTCGAGGAATCTTTAGAAGAGAGCAACGAGGAAACCTCCGAGCAAGAGTTAG
rJMSF042D09+ GTGAAGATGTCGAGGAATCTTTAGAAGAGAGCAACGAGGAAACCTCCGAGCAAGAGTTAG
rJMSF030M17+ GTGAAGATGTCGAGGAATCTTTAGAAGAGAGCAACGAGGAAACCTCCGAGCAAGAGTTAG
rJMFF050E05+ GTGAAGATGTCGAGGAATCTTTAGAAGAGAGCAACGAGGAAACCTCCGAGCAAGAGTTAG
                      ____________________________________________________________
consensus GTGAAGATGTCGAGGAATCTTTAGAAGAGAGCAACGAGGAAACCTCCGAGCAAGAGTTAG
 
. : . : . : . : . : . :
rJMSF011P21+ GTTGGAAAGACTGGTCTTCCCTTGAAGGGGTGTCTCGTGCAGACACCTTATTGACCTTGC
rJMSF042D09+ GTTGGAAAGACTGGTCTTCCCTTGAAGGGGTGTCTCGTGCAGACACCTTATTGACCTTGC
rJMSF030M17+ GTTGGAAAGACTGGTCTTCCCTTGAAGGGGTGTCTCGTGCAGACACCTTATTGACCTTGC
rJMFF050E05+ GTTGGAAAGACTGGTCTTCCCTTGAAGGGGTGTCTCGTGCAGACACCTTATTGACCTTGC
                      ____________________________________________________________
consensus GTTGGAAAGACTGGTCTTCCCTTGAAGGGGTGTCTCGTGCAGACACCTTATTGACCTTGC
 
. : . : . : . : . : . :
rJMSF011P21+ CAAGGTTTGACCCGGAAAAGGAGGAAGATAAAACTGCAGCAGGAGGAGGGACAAAGACAA
rJMSF042D09+ CAAGGTTTGACCCGGAAAAGGAGGAAGATAAAACTGCAGCAGGAGGAGGGACAAAGACAA
rJMSF030M17+ CAAGGTTTGACCCGGAAAAGGAGGAAGATAAAACTGCAGCAGGAGGAGGGACAAAGACAA
rJMFF050E05+ CAAGGTTTGACCCGGAAAAGGAGGAAGATAAAACTGCAGCAGGAGGAGGGACAAAGACAA
                      ____________________________________________________________
consensus CAAGGTTTGACCCGGAAAAGGAGGAAGATAAAACTGCAGCAGGAGGAGGGACAAAGACAA
 
. : . : . : . : . : . :
rJMSF011P21+ AGACGAAAACCAATAAAGGGTAAAACAACCAAAGGTCTGGATTTGAATTTTGCGACCCAG
rJMSF042D09+ AGACGAAAACCAATAAAGGGTAAAACAACCAAAGGTCTGGATTTGAATTTTGCGACCCAG
rJMSF030M17+ AGACGAAAACCAATAAAGGGTAAAACAACCAAAGGTCTGGATTTGAATTTTGCGACCCAG
rJMFF050E05+ AGACGAAAACCAATAAAGGGTAAAACAACCAAAGGTCTGGATTTGAATTTTGCGACCCAG
                      ____________________________________________________________
consensus AGACGAAAACCAATAAAGGGTAAAACAACCAAAGGTCTGGATTTGAATTTTGCGACCCAG
 
. : . : . : . : . : . :
rJMSF011P21+ ATTTCATTTTTTTGTGTATCTTTAAAATATCATTAGGGTATTGTTTTTCTACAAGGGGAA
rJMSF042D09+ ATTTCATTTTTTTGTGTATCTTTAAAATATCATTAGGGTATTGTTTTTCTACAAGGGGAA
rJMSF030M17+ ATTTCATTTTTTTGTGTATCTTTAAAATATCATTAGGGTATTGTTTTTCTACAAGGGGAA
rJMFF050E05+ ATTTCATTTTTTTGTGTATCTTTAAAATATCATTAGGGTATTGTTTTTCTACAAGGGGAA
                      ____________________________________________________________
consensus ATTTCATTTTTTTGTGTATCTTTAAAATATCATTAGGGTATTGTTTTTCTACAAGGGGAA
 
. : . : . : . : . : . :
rJMSF011P21+ AGTTGTTGTATGGCCATTGGCATTCATTCTGGACAAGGAGAGGTATGCCCCACTTTATTA
rJMSF042D09+ AGTTGTTGTATGGCCATTGGCATTCATTCTGGACAAGGAGAGGTATGCCCCACTTTATTA
rJMSF030M17+ AGTTGTTGTATGGCCATTGGCATTCATTCTGGACAAGGAGAGGTATGCCCCACTTTATTA
rJMFF050E05+ AGTTGTTGTATGGCCATTGGCATTCATTCTGGACAAGGAGAGGTATGCCCCACTTTATTA
                      ____________________________________________________________
consensus AGTTGTTGTATGGCCATTGGCATTCATTCTGGACAAGGAGAGGTATGCCCCACTTTATTA
 
. : . : . : . : . : . :
rJMSF011P21+ GTGCCTGGGGATCCCCCATCTCTCTTCCCCTATC
rJMSF042D09+ GTGCCTGGGGATCCCCCATCTCTCTTCCCCTATCAAGTGTGGTAAGAATTGGAATTTTGT
rJMSF030M17+ GTGCCTGGGGATCCCCCATCTCTCTTCCCCTATCAAGTGTGGTAAGAATTGGAATTTTGT
rJMFF050E05+ GTGCCTGGGGATCCCCCATCTCTCTTCCCCTATCAAGTGTGGTAAGAATTGGAATTTTGT
                      ____________________________________________________________
consensus GTGCCTGGGGATCCCCCATCTCTCTTCCCCTATCAAGTGTGGTAAGAATTGGAATTTTGT
 
. : . : . : . : . : . :
rJMSF042D09+ AGCATCCAAA
rJMSF030M17+ AGCATCCAAAGTGCCATCTTTTTATGATCCTATGTTGTTCTTGTTCCAGATTCTTTTATC
rJMFF050E05+ AGCATCCAAAGTGCCATCTTTTTATGATCCTATGTTGTTCTTGTTCCAGATTCTTTTATC
                      ____________________________________________________________
consensus AGCATCCAAAGTGCCATCTTTTTATGATCCTATGTTGTTCTTGTTCCAGATTCTTTTATC
 
. : . : . : . : . : . :
rJMSF030M17+ AGTTGATAAACTTGTGTGATTCATTAAAA
rJMFF050E05+ AGTTGATAAACTTGTGTGATTCATTAAAAATTTGTTCCATTAATGATATTCTGTGGCCAA
                      ____________________________________________________________
consensus AGTTGATAAACTTGTGTGATTCATTAAAAATTTGTTCCATTAATGATATTCTGTGGCCAA
 
. : . : . : . : . : . :
rJMFF050E05+ GCAGGCCCCTTTTGCTTCAAAAAAAAAAAAAAAAACTCTCCAGGGTGATCCGCCATAAGG
                      ____________________________________________________________
consensus GCAGGCCCCTTTTGCTTCAAAAAAAAAAAAAAAAACTCTCCAGGGTGATCCGCCATAAGG